EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016888 (Gene tree)
Gene ID: 101473188
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 17390 bases
Position: chrLG14:21558172-21575561
Accession: 101473188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005022554	NMD3	PF04981.13	2.5e-81	1	1
ENSMZEP00005022562	NMD3	PF04981.13	4.4e-67	1	2
ENSMZEP00005022562	NMD3	PF04981.13	4.4e-67	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005023303	-	3036	XM_024805006	ENSMZEP00005022554	504 (aa)	XP_024660774	UPI0003BD5974
ENSMZET00005023311	-	1446	-	ENSMZEP00005022562	481 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005016888's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016888	nmd3	99	78.175	ENSG00000169251	NMD3	100	79.817	Homo_sapiens
ENSMZEG00005016888	nmd3	100	95.238	ENSAPOG00000022912	nmd3	100	95.238	Acanthochromis_polyacanthus
ENSMZEG00005016888	nmd3	99	78.416	ENSAMEG00000001584	NMD3	99	78.416	Ailuropoda_melanoleuca
ENSMZEG00005016888	nmd3	100	92.063	ENSACIG00000015196	nmd3	100	92.063	Amphilophus_citrinellus
ENSMZEG00005016888	nmd3	100	95.437	ENSAOCG00000009086	nmd3	100	95.437	Amphiprion_ocellaris
ENSMZEG00005016888	nmd3	100	95.437	ENSAPEG00000000329	nmd3	100	95.437	Amphiprion_percula
ENSMZEG00005016888	nmd3	100	95.437	ENSATEG00000014351	nmd3	100	95.437	Anabas_testudineus
ENSMZEG00005016888	nmd3	100	76.832	ENSAPLG00000014786	NMD3	100	76.832	Anas_platyrhynchos
ENSMZEG00005016888	nmd3	100	80.990	ENSACAG00000007349	NMD3	100	80.990	Anolis_carolinensis
ENSMZEG00005016888	nmd3	99	78.156	ENSANAG00000026434	NMD3	99	78.156	Aotus_nancymaae
ENSMZEG00005016888	nmd3	100	100.000	ENSACLG00000015520	nmd3	100	100.000	Astatotilapia_calliptera
ENSMZEG00005016888	nmd3	100	90.675	ENSAMXG00000014415	nmd3	100	90.675	Astyanax_mexicanus
ENSMZEG00005016888	nmd3	99	77.976	ENSBTAG00000016228	NMD3	100	77.976	Bos_taurus
ENSMZEG00005016888	nmd3	96	49.393	WBGene00012030	T25G3.3	96	49.393	Caenorhabditis_elegans
ENSMZEG00005016888	nmd3	99	78.715	ENSCJAG00000002900	NMD3	97	78.715	Callithrix_jacchus
ENSMZEG00005016888	nmd3	99	77.711	ENSCAFG00000014352	NMD3	97	77.711	Canis_familiaris
ENSMZEG00005016888	nmd3	99	77.381	ENSCAFG00020021145	NMD3	99	77.381	Canis_lupus_dingo
ENSMZEG00005016888	nmd3	99	78.175	ENSCHIG00000016015	NMD3	100	78.175	Capra_hircus
ENSMZEG00005016888	nmd3	99	78.175	ENSTSYG00000002155	NMD3	99	78.175	Carlito_syrichta
ENSMZEG00005016888	nmd3	79	77.250	ENSCAPG00000017861	NMD3	93	77.250	Cavia_aperea
ENSMZEG00005016888	nmd3	87	77.803	ENSCPOG00000005953	NMD3	94	77.803	Cavia_porcellus
ENSMZEG00005016888	nmd3	99	77.976	ENSCCAG00000037460	NMD3	100	77.976	Cebus_capucinus
ENSMZEG00005016888	nmd3	99	78.770	ENSCATG00000030022	NMD3	100	78.770	Cercocebus_atys
ENSMZEG00005016888	nmd3	99	78.571	ENSCLAG00000003155	NMD3	100	78.571	Chinchilla_lanigera
ENSMZEG00005016888	nmd3	99	78.770	ENSCSAG00000012333	NMD3	100	78.770	Chlorocebus_sabaeus
ENSMZEG00005016888	nmd3	84	78.169	ENSCHOG00000001240	NMD3	80	78.169	Choloepus_hoffmanni
ENSMZEG00005016888	nmd3	99	82.540	ENSCPBG00000018318	NMD3	99	83.333	Chrysemys_picta_bellii
ENSMZEG00005016888	nmd3	97	54.268	ENSCING00000002129	-	97	54.268	Ciona_intestinalis
ENSMZEG00005016888	nmd3	87	54.318	ENSCSAVG00000001120	-	97	54.318	Ciona_savignyi
ENSMZEG00005016888	nmd3	99	72.962	ENSCANG00000042939	NMD3	95	72.565	Colobus_angolensis_palliatus
ENSMZEG00005016888	nmd3	91	68.764	ENSCGRG00001001792	Nmd3	97	68.764	Cricetulus_griseus_chok1gshd
ENSMZEG00005016888	nmd3	97	78.411	ENSCGRG00000007947	Nmd3	98	78.411	Cricetulus_griseus_crigri
ENSMZEG00005016888	nmd3	100	93.849	ENSCSEG00000017954	nmd3	100	93.849	Cynoglossus_semilaevis
ENSMZEG00005016888	nmd3	100	84.325	ENSCVAG00000004672	nmd3	100	84.722	Cyprinodon_variegatus
ENSMZEG00005016888	nmd3	100	87.327	ENSDARG00000015676	nmd3	100	87.327	Danio_rerio
ENSMZEG00005016888	nmd3	99	76.786	ENSDNOG00000045222	NMD3	100	76.786	Dasypus_novemcinctus
ENSMZEG00005016888	nmd3	97	71.166	ENSDORG00000005716	Nmd3	100	71.053	Dipodomys_ordii
ENSMZEG00005016888	nmd3	98	53.707	FBgn0023542	Nmd3	95	53.507	Drosophila_melanogaster
ENSMZEG00005016888	nmd3	99	67.659	ENSETEG00000003168	NMD3	99	67.659	Echinops_telfairi
ENSMZEG00005016888	nmd3	89	58.797	ENSEBUG00000014316	nmd3	97	58.797	Eptatretus_burgeri
ENSMZEG00005016888	nmd3	99	77.976	ENSEASG00005018672	NMD3	100	77.976	Equus_asinus_asinus
ENSMZEG00005016888	nmd3	99	78.313	ENSECAG00000000188	NMD3	97	78.313	Equus_caballus
ENSMZEG00005016888	nmd3	94	57.627	ENSEEUG00000010642	-	100	57.627	Erinaceus_europaeus
ENSMZEG00005016888	nmd3	100	89.484	ENSELUG00000024123	nmd3	100	89.484	Esox_lucius
ENSMZEG00005016888	nmd3	99	78.715	ENSFCAG00000022867	NMD3	99	78.571	Felis_catus
ENSMZEG00005016888	nmd3	94	80.632	ENSFALG00000008711	NMD3	100	80.632	Ficedula_albicollis
ENSMZEG00005016888	nmd3	99	76.832	ENSFDAG00000013724	-	100	76.832	Fukomys_damarensis
ENSMZEG00005016888	nmd3	97	64.909	ENSFDAG00000012197	-	98	65.092	Fukomys_damarensis
ENSMZEG00005016888	nmd3	100	92.857	ENSFHEG00000000415	nmd3	100	92.857	Fundulus_heteroclitus
ENSMZEG00005016888	nmd3	97	86.912	ENSGMOG00000009675	nmd3	100	86.912	Gadus_morhua
ENSMZEG00005016888	nmd3	100	80.000	ENSGALG00000009533	NMD3	100	80.000	Gallus_gallus
ENSMZEG00005016888	nmd3	99	94.366	ENSGAFG00000012798	nmd3	94	94.366	Gambusia_affinis
ENSMZEG00005016888	nmd3	100	92.063	ENSGACG00000010028	nmd3	100	92.063	Gasterosteus_aculeatus
ENSMZEG00005016888	nmd3	99	81.944	ENSGAGG00000006556	NMD3	99	81.944	Gopherus_agassizii
ENSMZEG00005016888	nmd3	99	63.221	ENSGGOG00000028590	-	99	63.221	Gorilla_gorilla
ENSMZEG00005016888	nmd3	99	78.571	ENSGGOG00000007157	NMD3	100	78.571	Gorilla_gorilla
ENSMZEG00005016888	nmd3	100	100.000	ENSHBUG00000001781	nmd3	100	100.000	Haplochromis_burtoni
ENSMZEG00005016888	nmd3	99	63.492	ENSHGLG00000010477	-	100	63.492	Heterocephalus_glaber_female
ENSMZEG00005016888	nmd3	99	77.778	ENSHGLG00000014451	-	100	77.778	Heterocephalus_glaber_female
ENSMZEG00005016888	nmd3	99	77.778	ENSHGLG00100006613	-	100	77.778	Heterocephalus_glaber_male
ENSMZEG00005016888	nmd3	99	63.690	ENSHGLG00100001042	-	100	63.690	Heterocephalus_glaber_male
ENSMZEG00005016888	nmd3	99	91.633	ENSHCOG00000004292	nmd3	92	91.633	Hippocampus_comes
ENSMZEG00005016888	nmd3	100	88.095	ENSIPUG00000005073	nmd3	100	88.095	Ictalurus_punctatus
ENSMZEG00005016888	nmd3	99	78.968	ENSSTOG00000001899	NMD3	100	78.968	Ictidomys_tridecemlineatus
ENSMZEG00005016888	nmd3	97	79.550	ENSJJAG00000019759	Nmd3	99	79.550	Jaculus_jaculus
ENSMZEG00005016888	nmd3	100	93.849	ENSKMAG00000020427	nmd3	100	93.849	Kryptolebias_marmoratus
ENSMZEG00005016888	nmd3	100	92.292	ENSLBEG00000022216	nmd3	100	92.292	Labrus_bergylta
ENSMZEG00005016888	nmd3	99	78.156	ENSLACG00000005731	NMD3	99	81.922	Latimeria_chalumnae
ENSMZEG00005016888	nmd3	100	88.317	ENSLOCG00000003561	nmd3	100	88.317	Lepisosteus_oculatus
ENSMZEG00005016888	nmd3	99	76.238	ENSLAFG00000007231	NMD3	100	76.238	Loxodonta_africana
ENSMZEG00005016888	nmd3	99	78.571	ENSMFAG00000040934	NMD3	100	78.571	Macaca_fascicularis
ENSMZEG00005016888	nmd3	99	77.734	ENSMMUG00000009564	NMD3	99	77.955	Macaca_mulatta
ENSMZEG00005016888	nmd3	99	78.571	ENSMNEG00000034626	NMD3	100	78.571	Macaca_nemestrina
ENSMZEG00005016888	nmd3	88	78.829	ENSMLEG00000002741	NMD3	100	78.829	Mandrillus_leucophaeus
ENSMZEG00005016888	nmd3	100	94.841	ENSMAMG00000012427	nmd3	100	94.841	Mastacembelus_armatus
ENSMZEG00005016888	nmd3	100	79.802	ENSMGAG00000010498	NMD3	100	79.802	Meleagris_gallopavo
ENSMZEG00005016888	nmd3	99	77.976	ENSMAUG00000000633	Nmd3	100	77.976	Mesocricetus_auratus
ENSMZEG00005016888	nmd3	99	77.976	ENSMICG00000049196	NMD3	100	77.976	Microcebus_murinus
ENSMZEG00005016888	nmd3	99	76.740	ENSMOCG00000005180	Nmd3	100	76.740	Microtus_ochrogaster
ENSMZEG00005016888	nmd3	100	93.069	ENSMMOG00000012765	nmd3	100	93.069	Mola_mola
ENSMZEG00005016888	nmd3	99	62.764	ENSMODG00000016296	NMD3	100	62.500	Monodelphis_domestica
ENSMZEG00005016888	nmd3	100	95.437	ENSMALG00000009256	nmd3	100	95.437	Monopterus_albus
ENSMZEG00005016888	nmd3	99	77.579	MGP_CAROLIEiJ_G0025069	Nmd3	100	77.579	Mus_caroli
ENSMZEG00005016888	nmd3	99	77.381	ENSMUSG00000027787	Nmd3	100	77.381	Mus_musculus
ENSMZEG00005016888	nmd3	99	77.381	MGP_PahariEiJ_G0026512	Nmd3	100	77.381	Mus_pahari
ENSMZEG00005016888	nmd3	99	77.579	MGP_SPRETEiJ_G0026011	Nmd3	100	77.579	Mus_spretus
ENSMZEG00005016888	nmd3	99	78.175	ENSMPUG00000002955	NMD3	99	78.175	Mustela_putorius_furo
ENSMZEG00005016888	nmd3	97	75.203	ENSMLUG00000000701	NMD3	97	75.203	Myotis_lucifugus
ENSMZEG00005016888	nmd3	99	77.535	ENSNGAG00000012307	Nmd3	99	77.535	Nannospalax_galili
ENSMZEG00005016888	nmd3	100	98.413	ENSNBRG00000003324	nmd3	100	98.413	Neolamprologus_brichardi
ENSMZEG00005016888	nmd3	99	78.373	ENSNLEG00000004655	NMD3	100	78.373	Nomascus_leucogenys
ENSMZEG00005016888	nmd3	73	70.175	ENSOPRG00000007690	-	73	70.175	Ochotona_princeps
ENSMZEG00005016888	nmd3	99	78.175	ENSODEG00000006270	NMD3	100	78.175	Octodon_degus
ENSMZEG00005016888	nmd3	100	98.810	ENSONIG00000003643	nmd3	100	98.810	Oreochromis_niloticus
ENSMZEG00005016888	nmd3	99	77.645	ENSOCUG00000017454	NMD3	100	77.645	Oryctolagus_cuniculus
ENSMZEG00005016888	nmd3	100	93.452	ENSORLG00000006279	nmd3	100	93.452	Oryzias_latipes
ENSMZEG00005016888	nmd3	100	93.254	ENSORLG00020003843	nmd3	100	93.254	Oryzias_latipes_hni
ENSMZEG00005016888	nmd3	100	92.857	ENSORLG00015006379	nmd3	100	92.857	Oryzias_latipes_hsok
ENSMZEG00005016888	nmd3	100	94.246	ENSOMEG00000012144	nmd3	100	94.246	Oryzias_melastigma
ENSMZEG00005016888	nmd3	99	77.778	ENSOGAG00000014910	NMD3	100	77.778	Otolemur_garnettii
ENSMZEG00005016888	nmd3	99	78.800	ENSOARG00000001883	NMD3	97	78.800	Ovis_aries
ENSMZEG00005016888	nmd3	99	78.175	ENSPPAG00000043829	NMD3	100	78.175	Pan_paniscus
ENSMZEG00005016888	nmd3	99	78.958	ENSPPRG00000000724	NMD3	97	78.958	Panthera_pardus
ENSMZEG00005016888	nmd3	99	78.373	ENSPTIG00000016761	NMD3	99	78.373	Panthera_tigris_altaica
ENSMZEG00005016888	nmd3	99	78.175	ENSPTRG00000015586	NMD3	100	78.175	Pan_troglodytes
ENSMZEG00005016888	nmd3	99	77.932	ENSPANG00000006665	NMD3	95	77.932	Papio_anubis
ENSMZEG00005016888	nmd3	100	89.286	ENSPKIG00000009928	nmd3	100	89.286	Paramormyrops_kingsleyae
ENSMZEG00005016888	nmd3	100	81.980	ENSPSIG00000007591	NMD3	100	81.980	Pelodiscus_sinensis
ENSMZEG00005016888	nmd3	100	88.294	ENSPMGG00000014015	nmd3	100	88.294	Periophthalmus_magnuspinnatus
ENSMZEG00005016888	nmd3	99	77.778	ENSPEMG00000021880	Nmd3	100	77.778	Peromyscus_maniculatus_bairdii
ENSMZEG00005016888	nmd3	99	81.151	ENSPCIG00000020869	NMD3	100	81.151	Phascolarctos_cinereus
ENSMZEG00005016888	nmd3	100	95.040	ENSPFOG00000012103	nmd3	100	95.040	Poecilia_formosa
ENSMZEG00005016888	nmd3	100	95.238	ENSPLAG00000008087	nmd3	100	95.238	Poecilia_latipinna
ENSMZEG00005016888	nmd3	100	95.040	ENSPMEG00000008506	nmd3	100	95.040	Poecilia_mexicana
ENSMZEG00005016888	nmd3	100	95.040	ENSPREG00000001848	nmd3	100	95.040	Poecilia_reticulata
ENSMZEG00005016888	nmd3	99	78.373	ENSPPYG00000014263	NMD3	100	78.373	Pongo_abelii
ENSMZEG00005016888	nmd3	91	64.565	ENSPCAG00000009851	NMD3	100	64.565	Procavia_capensis
ENSMZEG00005016888	nmd3	89	74.790	ENSPVAG00000003301	NMD3	85	74.790	Pteropus_vampyrus
ENSMZEG00005016888	nmd3	100	99.802	ENSPNYG00000006778	nmd3	100	99.802	Pundamilia_nyererei
ENSMZEG00005016888	nmd3	100	89.286	ENSPNAG00000009442	nmd3	100	89.286	Pygocentrus_nattereri
ENSMZEG00005016888	nmd3	99	76.587	ENSRNOG00000009310	Nmd3	100	76.587	Rattus_norvegicus
ENSMZEG00005016888	nmd3	99	74.405	ENSRBIG00000040379	NMD3	100	74.405	Rhinopithecus_bieti
ENSMZEG00005016888	nmd3	99	78.175	ENSRROG00000036181	NMD3	100	78.175	Rhinopithecus_roxellana
ENSMZEG00005016888	nmd3	94	43.058	YHR170W	NMD3	94	43.260	Saccharomyces_cerevisiae
ENSMZEG00005016888	nmd3	99	77.600	ENSSBOG00000024021	NMD3	99	77.600	Saimiri_boliviensis_boliviensis
ENSMZEG00005016888	nmd3	99	75.197	ENSSHAG00000016044	NMD3	100	74.802	Sarcophilus_harrisii
ENSMZEG00005016888	nmd3	100	90.476	ENSSFOG00015003609	nmd3	100	90.476	Scleropages_formosus
ENSMZEG00005016888	nmd3	100	91.865	ENSSMAG00000012887	nmd3	100	91.865	Scophthalmus_maximus
ENSMZEG00005016888	nmd3	100	95.635	ENSSDUG00000023721	nmd3	100	95.635	Seriola_dumerili
ENSMZEG00005016888	nmd3	100	95.040	ENSSLDG00000006565	nmd3	100	95.040	Seriola_lalandi_dorsalis
ENSMZEG00005016888	nmd3	97	78.323	ENSSARG00000010402	NMD3	99	78.323	Sorex_araneus
ENSMZEG00005016888	nmd3	99	80.400	ENSSPUG00000018791	NMD3	100	80.400	Sphenodon_punctatus
ENSMZEG00005016888	nmd3	100	95.437	ENSSPAG00000014328	nmd3	100	95.437	Stegastes_partitus
ENSMZEG00005016888	nmd3	99	77.711	ENSSSCG00000022952	NMD3	100	77.579	Sus_scrofa
ENSMZEG00005016888	nmd3	91	78.525	ENSTGUG00000015141	-	100	78.525	Taeniopygia_guttata
ENSMZEG00005016888	nmd3	99	80.159	ENSTGUG00000011140	-	100	80.159	Taeniopygia_guttata
ENSMZEG00005016888	nmd3	100	93.254	ENSTRUG00000005958	nmd3	100	93.254	Takifugu_rubripes
ENSMZEG00005016888	nmd3	91	70.899	ENSTBEG00000011783	-	87	70.899	Tupaia_belangeri
ENSMZEG00005016888	nmd3	99	73.413	ENSTTRG00000012938	NMD3	100	73.413	Tursiops_truncatus
ENSMZEG00005016888	nmd3	82	77.372	ENSUAMG00000009305	-	99	78.607	Ursus_americanus
ENSMZEG00005016888	nmd3	99	78.557	ENSUMAG00000011070	NMD3	99	78.514	Ursus_maritimus
ENSMZEG00005016888	nmd3	99	76.984	ENSVPAG00000008779	NMD3	100	76.984	Vicugna_pacos
ENSMZEG00005016888	nmd3	99	77.912	ENSVVUG00000023055	NMD3	99	77.912	Vulpes_vulpes
ENSMZEG00005016888	nmd3	100	82.574	ENSXETG00000027727	nmd3	100	82.574	Xenopus_tropicalis
ENSMZEG00005016888	nmd3	71	91.304	ENSXCOG00000012490	nmd3	99	91.589	Xiphophorus_couchianus
ENSMZEG00005016888	nmd3	100	95.238	ENSXMAG00000018406	nmd3	100	95.238	Xiphophorus_maculatus