EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005016987 (Gene tree)
Gene ID: 101472070
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 9019 bases
Position: chrLG22:27605942-27614960
Accession: 101472070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005022694	SF3a60_bindingd	PF12108.8	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005023444	-	2866	XM_004561029	ENSMZEP00005022694	501 (aa)	XP_004561086	UPI000329B943

Gene Model

Click here to download ENSMZEG00005016987's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005016987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005016987	sf3a3	100	91.617	ENSG00000183431	SF3A3	100	91.617	Homo_sapiens
ENSMZEG00005016987	sf3a3	100	97.804	ENSAPOG00000015608	sf3a3	100	97.804	Acanthochromis_polyacanthus
ENSMZEG00005016987	sf3a3	100	91.617	ENSAMEG00000001262	SF3A3	100	91.617	Ailuropoda_melanoleuca
ENSMZEG00005016987	sf3a3	95	93.294	ENSACIG00000009061	sf3a3	99	93.294	Amphilophus_citrinellus
ENSMZEG00005016987	sf3a3	100	98.004	ENSAOCG00000013954	sf3a3	100	98.004	Amphiprion_ocellaris
ENSMZEG00005016987	sf3a3	100	98.004	ENSAPEG00000007297	sf3a3	100	98.004	Amphiprion_percula
ENSMZEG00005016987	sf3a3	100	97.605	ENSATEG00000008754	sf3a3	100	97.605	Anabas_testudineus
ENSMZEG00005016987	sf3a3	94	91.684	ENSAPLG00000014900	SF3A3	100	91.684	Anas_platyrhynchos
ENSMZEG00005016987	sf3a3	100	89.820	ENSACAG00000017058	SF3A3	100	89.820	Anolis_carolinensis
ENSMZEG00005016987	sf3a3	100	71.457	ENSANAG00000036903	-	100	71.457	Aotus_nancymaae
ENSMZEG00005016987	sf3a3	99	88.353	ENSANAG00000014878	SF3A3	100	88.353	Aotus_nancymaae
ENSMZEG00005016987	sf3a3	100	100.000	ENSACLG00000017977	sf3a3	100	100.000	Astatotilapia_calliptera
ENSMZEG00005016987	sf3a3	100	94.411	ENSAMXG00000016855	sf3a3	87	94.411	Astyanax_mexicanus
ENSMZEG00005016987	sf3a3	100	91.617	ENSBTAG00000007299	SF3A3	100	91.617	Bos_taurus
ENSMZEG00005016987	sf3a3	100	52.087	WBGene00011758	T13H5.4	100	52.087	Caenorhabditis_elegans
ENSMZEG00005016987	sf3a3	100	91.617	ENSCJAG00000002176	SF3A3	100	91.617	Callithrix_jacchus
ENSMZEG00005016987	sf3a3	100	91.617	ENSCAFG00000003222	-	100	91.617	Canis_familiaris
ENSMZEG00005016987	sf3a3	100	91.617	ENSCAFG00000000683	-	100	91.617	Canis_familiaris
ENSMZEG00005016987	sf3a3	100	91.617	ENSCAFG00020006186	SF3A3	100	91.617	Canis_lupus_dingo
ENSMZEG00005016987	sf3a3	100	91.617	ENSCHIG00000020638	SF3A3	100	91.617	Capra_hircus
ENSMZEG00005016987	sf3a3	100	85.429	ENSTSYG00000008417	SF3A3	100	85.429	Carlito_syrichta
ENSMZEG00005016987	sf3a3	85	59.725	ENSCAPG00000003466	SF3A3	100	56.979	Cavia_aperea
ENSMZEG00005016987	sf3a3	100	91.816	ENSCPOG00000008660	SF3A3	100	91.816	Cavia_porcellus
ENSMZEG00005016987	sf3a3	100	65.469	ENSCCAG00000034048	-	100	62.475	Cebus_capucinus
ENSMZEG00005016987	sf3a3	100	91.617	ENSCCAG00000033732	SF3A3	100	91.617	Cebus_capucinus
ENSMZEG00005016987	sf3a3	100	91.617	ENSCATG00000043496	SF3A3	100	91.617	Cercocebus_atys
ENSMZEG00005016987	sf3a3	94	73.987	ENSCATG00000041660	-	100	75.480	Cercocebus_atys
ENSMZEG00005016987	sf3a3	100	68.526	ENSCATG00000043537	-	100	69.124	Cercocebus_atys
ENSMZEG00005016987	sf3a3	100	91.617	ENSCLAG00000010838	SF3A3	100	91.617	Chinchilla_lanigera
ENSMZEG00005016987	sf3a3	95	91.176	ENSCSAG00000001120	SF3A3	100	91.176	Chlorocebus_sabaeus
ENSMZEG00005016987	sf3a3	78	86.772	ENSCHOG00000006849	SF3A3	80	86.772	Choloepus_hoffmanni
ENSMZEG00005016987	sf3a3	100	83.832	ENSCPBG00000018291	-	100	83.832	Chrysemys_picta_bellii
ENSMZEG00005016987	sf3a3	70	61.773	ENSCPBG00000007472	-	95	61.602	Chrysemys_picta_bellii
ENSMZEG00005016987	sf3a3	100	68.526	ENSCING00000002730	-	100	68.526	Ciona_intestinalis
ENSMZEG00005016987	sf3a3	100	67.265	ENSCSAVG00000005063	-	100	67.265	Ciona_savignyi
ENSMZEG00005016987	sf3a3	100	91.617	ENSCANG00000042083	SF3A3	100	91.617	Colobus_angolensis_palliatus
ENSMZEG00005016987	sf3a3	100	65.469	ENSCANG00000035535	-	100	65.469	Colobus_angolensis_palliatus
ENSMZEG00005016987	sf3a3	100	91.417	ENSCGRG00001011320	Sf3a3	100	91.417	Cricetulus_griseus_chok1gshd
ENSMZEG00005016987	sf3a3	100	91.417	ENSCGRG00000012156	Sf3a3	100	91.417	Cricetulus_griseus_crigri
ENSMZEG00005016987	sf3a3	100	95.210	ENSCSEG00000010401	sf3a3	100	95.210	Cynoglossus_semilaevis
ENSMZEG00005016987	sf3a3	94	95.736	ENSCVAG00000010239	sf3a3	95	95.736	Cyprinodon_variegatus
ENSMZEG00005016987	sf3a3	100	93.613	ENSDARG00000100114	sf3a3	100	94.033	Danio_rerio
ENSMZEG00005016987	sf3a3	91	91.028	ENSDNOG00000046628	SF3A3	99	91.028	Dasypus_novemcinctus
ENSMZEG00005016987	sf3a3	100	91.816	ENSDORG00000008798	Sf3a3	100	91.816	Dipodomys_ordii
ENSMZEG00005016987	sf3a3	100	64.822	FBgn0014366	noi	100	64.625	Drosophila_melanogaster
ENSMZEG00005016987	sf3a3	100	79.125	ENSEBUG00000015411	sf3a3	92	79.523	Eptatretus_burgeri
ENSMZEG00005016987	sf3a3	100	91.617	ENSEASG00005012906	SF3A3	100	91.617	Equus_asinus_asinus
ENSMZEG00005016987	sf3a3	100	91.617	ENSECAG00000017333	SF3A3	100	91.617	Equus_caballus
ENSMZEG00005016987	sf3a3	100	93.413	ENSELUG00000010024	sf3a3	100	93.413	Esox_lucius
ENSMZEG00005016987	sf3a3	100	91.617	ENSFCAG00000027772	SF3A3	100	91.617	Felis_catus
ENSMZEG00005016987	sf3a3	100	91.417	ENSFALG00000001003	SF3A3	100	91.417	Ficedula_albicollis
ENSMZEG00005016987	sf3a3	100	91.816	ENSFDAG00000020908	SF3A3	100	91.816	Fukomys_damarensis
ENSMZEG00005016987	sf3a3	100	97.206	ENSFHEG00000019107	sf3a3	100	97.206	Fundulus_heteroclitus
ENSMZEG00005016987	sf3a3	100	93.214	ENSGMOG00000015540	sf3a3	100	93.214	Gadus_morhua
ENSMZEG00005016987	sf3a3	100	91.218	ENSGALG00000001540	SF3A3	100	91.218	Gallus_gallus
ENSMZEG00005016987	sf3a3	100	97.405	ENSGAFG00000002320	sf3a3	100	97.405	Gambusia_affinis
ENSMZEG00005016987	sf3a3	100	96.407	ENSGACG00000007842	sf3a3	100	96.407	Gasterosteus_aculeatus
ENSMZEG00005016987	sf3a3	100	91.218	ENSGAGG00000014980	SF3A3	100	91.218	Gopherus_agassizii
ENSMZEG00005016987	sf3a3	100	71.058	ENSGGOG00000022611	-	100	70.659	Gorilla_gorilla
ENSMZEG00005016987	sf3a3	100	91.617	ENSGGOG00000013928	SF3A3	100	91.617	Gorilla_gorilla
ENSMZEG00005016987	sf3a3	100	100.000	ENSHBUG00000018158	sf3a3	100	100.000	Haplochromis_burtoni
ENSMZEG00005016987	sf3a3	100	91.816	ENSHGLG00000012502	SF3A3	100	91.816	Heterocephalus_glaber_female
ENSMZEG00005016987	sf3a3	100	91.816	ENSHGLG00100010546	SF3A3	100	91.816	Heterocephalus_glaber_male
ENSMZEG00005016987	sf3a3	100	95.210	ENSHCOG00000015109	sf3a3	100	95.210	Hippocampus_comes
ENSMZEG00005016987	sf3a3	100	93.413	ENSIPUG00000011603	sf3a3	100	93.413	Ictalurus_punctatus
ENSMZEG00005016987	sf3a3	100	91.617	ENSSTOG00000001691	SF3A3	100	91.617	Ictidomys_tridecemlineatus
ENSMZEG00005016987	sf3a3	100	91.617	ENSJJAG00000012404	Sf3a3	100	91.617	Jaculus_jaculus
ENSMZEG00005016987	sf3a3	100	97.804	ENSKMAG00000007632	sf3a3	100	97.804	Kryptolebias_marmoratus
ENSMZEG00005016987	sf3a3	100	87.649	ENSLBEG00000000816	sf3a3	100	87.649	Labrus_bergylta
ENSMZEG00005016987	sf3a3	100	94.212	ENSLOCG00000003273	sf3a3	100	94.212	Lepisosteus_oculatus
ENSMZEG00005016987	sf3a3	100	80.040	ENSLAFG00000008094	SF3A3	100	80.040	Loxodonta_africana
ENSMZEG00005016987	sf3a3	100	91.617	ENSMFAG00000043047	SF3A3	100	91.617	Macaca_fascicularis
ENSMZEG00005016987	sf3a3	94	73.561	ENSMFAG00000036706	-	100	75.267	Macaca_fascicularis
ENSMZEG00005016987	sf3a3	100	71.514	ENSMMUG00000038820	-	100	73.108	Macaca_mulatta
ENSMZEG00005016987	sf3a3	100	91.617	ENSMMUG00000023199	SF3A3	100	91.617	Macaca_mulatta
ENSMZEG00005016987	sf3a3	94	71.215	ENSMNEG00000028686	-	100	72.921	Macaca_nemestrina
ENSMZEG00005016987	sf3a3	100	91.617	ENSMNEG00000044291	SF3A3	100	91.617	Macaca_nemestrina
ENSMZEG00005016987	sf3a3	100	67.928	ENSMLEG00000028631	-	100	68.526	Mandrillus_leucophaeus
ENSMZEG00005016987	sf3a3	100	91.617	ENSMLEG00000030641	SF3A3	100	91.617	Mandrillus_leucophaeus
ENSMZEG00005016987	sf3a3	100	75.649	ENSMLEG00000036714	-	100	77.046	Mandrillus_leucophaeus
ENSMZEG00005016987	sf3a3	100	98.004	ENSMAMG00000001942	sf3a3	100	98.004	Mastacembelus_armatus
ENSMZEG00005016987	sf3a3	100	86.680	ENSMGAG00000002875	SF3A3	100	86.680	Meleagris_gallopavo
ENSMZEG00005016987	sf3a3	100	87.226	ENSMICG00000001485	-	100	87.226	Microcebus_murinus
ENSMZEG00005016987	sf3a3	91	88.646	ENSMICG00000026541	-	100	88.646	Microcebus_murinus
ENSMZEG00005016987	sf3a3	100	85.629	ENSMICG00000043548	-	100	85.629	Microcebus_murinus
ENSMZEG00005016987	sf3a3	100	88.224	ENSMOCG00000019939	-	100	88.224	Microtus_ochrogaster
ENSMZEG00005016987	sf3a3	95	85.053	ENSMOCG00000014565	-	97	83.789	Microtus_ochrogaster
ENSMZEG00005016987	sf3a3	100	97.605	ENSMMOG00000014307	sf3a3	100	97.605	Mola_mola
ENSMZEG00005016987	sf3a3	100	71.845	ENSMODG00000017729	-	100	70.849	Monodelphis_domestica
ENSMZEG00005016987	sf3a3	100	84.032	ENSMODG00000024045	-	100	84.032	Monodelphis_domestica
ENSMZEG00005016987	sf3a3	100	97.206	ENSMALG00000004836	sf3a3	100	97.206	Monopterus_albus
ENSMZEG00005016987	sf3a3	100	91.417	MGP_CAROLIEiJ_G0026449	Sf3a3	100	91.417	Mus_caroli
ENSMZEG00005016987	sf3a3	100	91.417	ENSMUSG00000028902	Sf3a3	100	91.417	Mus_musculus
ENSMZEG00005016987	sf3a3	100	86.427	MGP_PahariEiJ_G0028780	Sf3a3	100	86.427	Mus_pahari
ENSMZEG00005016987	sf3a3	100	91.417	MGP_SPRETEiJ_G0027428	Sf3a3	100	91.417	Mus_spretus
ENSMZEG00005016987	sf3a3	100	91.218	ENSMLUG00000000991	SF3A3	100	91.218	Myotis_lucifugus
ENSMZEG00005016987	sf3a3	100	86.627	ENSNGAG00000018032	Sf3a3	100	86.627	Nannospalax_galili
ENSMZEG00005016987	sf3a3	100	83.633	ENSNLEG00000011720	SF3A3	100	83.633	Nomascus_leucogenys
ENSMZEG00005016987	sf3a3	100	91.816	ENSOPRG00000012785	SF3A3	100	91.816	Ochotona_princeps
ENSMZEG00005016987	sf3a3	100	87.625	ENSODEG00000007470	-	100	87.625	Octodon_degus
ENSMZEG00005016987	sf3a3	100	77.689	ENSODEG00000000937	-	100	80.080	Octodon_degus
ENSMZEG00005016987	sf3a3	100	80.040	ENSODEG00000018393	-	100	79.840	Octodon_degus
ENSMZEG00005016987	sf3a3	100	86.427	ENSODEG00000006854	-	100	89.022	Octodon_degus
ENSMZEG00005016987	sf3a3	87	100.000	ENSONIG00000010296	sf3a3	100	100.000	Oreochromis_niloticus
ENSMZEG00005016987	sf3a3	94	91.045	ENSOANG00000002473	SF3A3	100	91.045	Ornithorhynchus_anatinus
ENSMZEG00005016987	sf3a3	100	91.816	ENSOCUG00000005407	SF3A3	100	91.816	Oryctolagus_cuniculus
ENSMZEG00005016987	sf3a3	100	95.609	ENSORLG00000008175	sf3a3	100	95.609	Oryzias_latipes
ENSMZEG00005016987	sf3a3	100	95.409	ENSORLG00020013708	sf3a3	100	95.409	Oryzias_latipes_hni
ENSMZEG00005016987	sf3a3	100	95.210	ENSORLG00015004104	sf3a3	100	95.210	Oryzias_latipes_hsok
ENSMZEG00005016987	sf3a3	100	96.208	ENSOMEG00000020177	sf3a3	100	96.208	Oryzias_melastigma
ENSMZEG00005016987	sf3a3	100	91.617	ENSOARG00000019950	SF3A3	100	91.617	Ovis_aries
ENSMZEG00005016987	sf3a3	100	91.617	ENSPPAG00000034066	SF3A3	100	91.617	Pan_paniscus
ENSMZEG00005016987	sf3a3	100	70.259	ENSPPAG00000039955	-	100	69.860	Pan_paniscus
ENSMZEG00005016987	sf3a3	100	91.617	ENSPPRG00000001258	SF3A3	100	91.617	Panthera_pardus
ENSMZEG00005016987	sf3a3	100	91.617	ENSPTIG00000007515	SF3A3	100	91.617	Panthera_tigris_altaica
ENSMZEG00005016987	sf3a3	100	71.457	ENSPTRG00000046013	-	100	71.058	Pan_troglodytes
ENSMZEG00005016987	sf3a3	100	91.617	ENSPTRG00000000559	SF3A3	100	91.617	Pan_troglodytes
ENSMZEG00005016987	sf3a3	100	78.244	ENSPANG00000029393	-	100	79.641	Papio_anubis
ENSMZEG00005016987	sf3a3	87	82.955	ENSPANG00000031214	-	100	66.467	Papio_anubis
ENSMZEG00005016987	sf3a3	100	91.617	ENSPANG00000021859	SF3A3	100	91.617	Papio_anubis
ENSMZEG00005016987	sf3a3	100	93.613	ENSPKIG00000004719	sf3a3	100	93.613	Paramormyrops_kingsleyae
ENSMZEG00005016987	sf3a3	100	89.264	ENSPSIG00000004273	SF3A3	100	89.264	Pelodiscus_sinensis
ENSMZEG00005016987	sf3a3	91	95.624	ENSPMGG00000003610	sf3a3	94	95.624	Periophthalmus_magnuspinnatus
ENSMZEG00005016987	sf3a3	100	91.417	ENSPEMG00000020805	Sf3a3	100	91.417	Peromyscus_maniculatus_bairdii
ENSMZEG00005016987	sf3a3	54	77.407	ENSPMAG00000001044	sf3a3	98	77.407	Petromyzon_marinus
ENSMZEG00005016987	sf3a3	100	91.417	ENSPCIG00000025719	SF3A3	100	91.417	Phascolarctos_cinereus
ENSMZEG00005016987	sf3a3	100	97.405	ENSPFOG00000005284	sf3a3	100	97.405	Poecilia_formosa
ENSMZEG00005016987	sf3a3	99	94.165	ENSPLAG00000003979	sf3a3	92	94.165	Poecilia_latipinna
ENSMZEG00005016987	sf3a3	78	92.621	ENSPMEG00000021132	sf3a3	88	92.621	Poecilia_mexicana
ENSMZEG00005016987	sf3a3	100	97.206	ENSPREG00000013802	sf3a3	100	97.206	Poecilia_reticulata
ENSMZEG00005016987	sf3a3	100	89.022	ENSPPYG00000001519	SF3A3	100	89.022	Pongo_abelii
ENSMZEG00005016987	sf3a3	100	85.230	ENSPCAG00000010734	SF3A3	100	85.230	Procavia_capensis
ENSMZEG00005016987	sf3a3	100	75.649	ENSPCOG00000017131	-	100	75.649	Propithecus_coquereli
ENSMZEG00005016987	sf3a3	100	80.952	ENSPCOG00000020389	-	100	80.952	Propithecus_coquereli
ENSMZEG00005016987	sf3a3	100	80.240	ENSPVAG00000010158	SF3A3	100	80.240	Pteropus_vampyrus
ENSMZEG00005016987	sf3a3	100	100.000	ENSPNYG00000000786	sf3a3	100	100.000	Pundamilia_nyererei
ENSMZEG00005016987	sf3a3	100	94.810	ENSPNAG00000010298	sf3a3	100	94.810	Pygocentrus_nattereri
ENSMZEG00005016987	sf3a3	100	91.417	ENSRNOG00000007629	Sf3a3	100	91.417	Rattus_norvegicus
ENSMZEG00005016987	sf3a3	100	68.064	ENSRBIG00000041123	-	100	68.064	Rhinopithecus_bieti
ENSMZEG00005016987	sf3a3	100	67.465	ENSRBIG00000043833	-	100	67.465	Rhinopithecus_bieti
ENSMZEG00005016987	sf3a3	100	91.617	ENSRBIG00000043567	SF3A3	100	91.617	Rhinopithecus_bieti
ENSMZEG00005016987	sf3a3	100	91.617	ENSRROG00000033888	SF3A3	100	91.617	Rhinopithecus_roxellana
ENSMZEG00005016987	sf3a3	94	72.708	ENSRROG00000032346	-	100	72.708	Rhinopithecus_roxellana
ENSMZEG00005016987	sf3a3	89	88.119	ENSSBOG00000032688	SF3A3	100	88.119	Saimiri_boliviensis_boliviensis
ENSMZEG00005016987	sf3a3	100	66.467	ENSSBOG00000026932	-	100	65.469	Saimiri_boliviensis_boliviensis
ENSMZEG00005016987	sf3a3	90	91.832	ENSSHAG00000014530	SF3A3	100	91.832	Sarcophilus_harrisii
ENSMZEG00005016987	sf3a3	100	95.210	ENSSFOG00015005975	sf3a3	100	95.210	Scleropages_formosus
ENSMZEG00005016987	sf3a3	100	96.208	ENSSMAG00000020213	sf3a3	100	96.208	Scophthalmus_maximus
ENSMZEG00005016987	sf3a3	100	94.012	ENSSDUG00000011590	sf3a3	100	94.012	Seriola_dumerili
ENSMZEG00005016987	sf3a3	100	98.004	ENSSLDG00000020635	sf3a3	100	98.004	Seriola_lalandi_dorsalis
ENSMZEG00005016987	sf3a3	100	91.018	ENSSPUG00000004010	SF3A3	100	91.018	Sphenodon_punctatus
ENSMZEG00005016987	sf3a3	100	98.403	ENSSPAG00000018653	sf3a3	100	98.403	Stegastes_partitus
ENSMZEG00005016987	sf3a3	100	91.617	ENSSSCG00000003643	SF3A3	100	91.617	Sus_scrofa
ENSMZEG00005016987	sf3a3	87	91.954	ENSTGUG00000001466	SF3A3	100	91.743	Taeniopygia_guttata
ENSMZEG00005016987	sf3a3	100	96.208	ENSTRUG00000009089	sf3a3	100	96.208	Takifugu_rubripes
ENSMZEG00005016987	sf3a3	100	95.427	ENSTNIG00000009800	sf3a3	100	95.427	Tetraodon_nigroviridis
ENSMZEG00005016987	sf3a3	100	80.040	ENSTBEG00000007614	SF3A3	100	80.040	Tupaia_belangeri
ENSMZEG00005016987	sf3a3	100	91.417	ENSTTRG00000013519	SF3A3	100	91.417	Tursiops_truncatus
ENSMZEG00005016987	sf3a3	100	91.617	ENSUAMG00000006134	SF3A3	100	91.617	Ursus_americanus
ENSMZEG00005016987	sf3a3	100	91.617	ENSUMAG00000021250	SF3A3	100	91.617	Ursus_maritimus
ENSMZEG00005016987	sf3a3	66	97.674	ENSVPAG00000004778	SF3A3	73	97.674	Vicugna_pacos
ENSMZEG00005016987	sf3a3	100	87.824	ENSVVUG00000022908	SF3A3	100	87.824	Vulpes_vulpes
ENSMZEG00005016987	sf3a3	100	89.421	ENSXETG00000022923	sf3a3	100	89.421	Xenopus_tropicalis
ENSMZEG00005016987	sf3a3	100	97.405	ENSXMAG00000017165	sf3a3	100	97.405	Xiphophorus_maculatus