EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017019 (Gene tree)
Gene ID: 101467216
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: roquin-2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 26229 bases
Position: chrLG7:38960157-38986385
Accession: 101467216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005022732	zf-CCCH	PF00642.24	8e-06	1	1
ENSMZEP00005022744	zf-CCCH	PF00642.24	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005023495	-	8227	XM_004538308	ENSMZEP00005022744	1141 (aa)	XP_004538365	UPI0003298332
ENSMZET00005023482	-	8242	XM_004538307	ENSMZEP00005022732	1141 (aa)	XP_004538364	UPI0003298332

Gene Model

Click here to download ENSMZEG00005017019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017019	rc3h2	92	55.703	ENSG00000056586	RC3H2	95	87.389	Homo_sapiens
ENSMZEG00005017019	rc3h2	100	89.187	ENSAPOG00000002117	rc3h2	100	89.706	Acanthochromis_polyacanthus
ENSMZEG00005017019	rc3h2	92	56.145	ENSAMEG00000006498	RC3H2	91	56.410	Ailuropoda_melanoleuca
ENSMZEG00005017019	rc3h2	100	89.177	ENSAPEG00000007757	rc3h2	100	89.697	Amphiprion_percula
ENSMZEG00005017019	rc3h2	100	86.419	ENSATEG00000019414	rc3h2	100	86.505	Anabas_testudineus
ENSMZEG00005017019	rc3h2	93	57.839	ENSAPLG00000013920	RC3H2	92	57.965	Anas_platyrhynchos
ENSMZEG00005017019	rc3h2	92	55.880	ENSANAG00000030862	RC3H2	99	83.891	Aotus_nancymaae
ENSMZEG00005017019	rc3h2	100	98.527	ENSACLG00000023136	rc3h2	100	98.527	Astatotilapia_calliptera
ENSMZEG00005017019	rc3h2	94	67.990	ENSAMXG00000006778	rc3h2	100	69.212	Astyanax_mexicanus
ENSMZEG00005017019	rc3h2	93	55.625	ENSBTAG00000023867	RC3H2	91	56.800	Bos_taurus
ENSMZEG00005017019	rc3h2	92	55.880	ENSCJAG00000020050	RC3H2	99	83.891	Callithrix_jacchus
ENSMZEG00005017019	rc3h2	92	56.333	ENSCAFG00020015288	RC3H2	95	87.389	Canis_lupus_dingo
ENSMZEG00005017019	rc3h2	92	56.356	ENSCHIG00000019319	RC3H2	91	56.622	Capra_hircus
ENSMZEG00005017019	rc3h2	84	51.085	ENSCAPG00000017086	RC3H2	92	51.085	Cavia_aperea
ENSMZEG00005017019	rc3h2	92	56.560	ENSCPOG00000008511	RC3H2	91	56.560	Cavia_porcellus
ENSMZEG00005017019	rc3h2	92	56.244	ENSCCAG00000001404	RC3H2	99	83.891	Cebus_capucinus
ENSMZEG00005017019	rc3h2	92	55.791	ENSCATG00000036655	RC3H2	95	87.389	Cercocebus_atys
ENSMZEG00005017019	rc3h2	92	56.510	ENSCLAG00000013261	RC3H2	91	56.510	Chinchilla_lanigera
ENSMZEG00005017019	rc3h2	81	52.794	ENSCSAG00000013416	RC3H2	90	53.094	Chlorocebus_sabaeus
ENSMZEG00005017019	rc3h2	93	57.394	ENSCPBG00000009811	RC3H2	91	57.867	Chrysemys_picta_bellii
ENSMZEG00005017019	rc3h2	92	55.791	ENSCANG00000043140	RC3H2	95	87.389	Colobus_angolensis_palliatus
ENSMZEG00005017019	rc3h2	93	56.190	ENSCGRG00001010006	Rc3h2	92	56.404	Cricetulus_griseus_chok1gshd
ENSMZEG00005017019	rc3h2	71	62.736	ENSCGRG00000009255	Rc3h2	77	63.015	Cricetulus_griseus_crigri
ENSMZEG00005017019	rc3h2	100	81.095	ENSCSEG00000017460	rc3h2	100	81.266	Cynoglossus_semilaevis
ENSMZEG00005017019	rc3h2	99	79.670	ENSCVAG00000012202	rc3h2	100	79.322	Cyprinodon_variegatus
ENSMZEG00005017019	rc3h2	100	63.057	ENSDARG00000063050	rc3h2	100	63.057	Danio_rerio
ENSMZEG00005017019	rc3h2	92	56.394	ENSDNOG00000014557	RC3H2	91	56.661	Dasypus_novemcinctus
ENSMZEG00005017019	rc3h2	92	56.422	ENSDORG00000006398	Rc3h2	91	56.422	Dipodomys_ordii
ENSMZEG00005017019	rc3h2	92	56.022	ENSEASG00005020897	RC3H2	99	79.289	Equus_asinus_asinus
ENSMZEG00005017019	rc3h2	92	56.244	ENSECAG00000022176	RC3H2	91	56.510	Equus_caballus
ENSMZEG00005017019	rc3h2	100	70.345	ENSELUG00000006105	rc3h2	100	70.482	Esox_lucius
ENSMZEG00005017019	rc3h2	93	55.694	ENSFCAG00000007375	RC3H2	91	56.599	Felis_catus
ENSMZEG00005017019	rc3h2	92	57.904	ENSFALG00000002011	RC3H2	91	58.030	Ficedula_albicollis
ENSMZEG00005017019	rc3h2	92	56.383	ENSFDAG00000012477	RC3H2	91	56.383	Fukomys_damarensis
ENSMZEG00005017019	rc3h2	99	80.486	ENSFHEG00000012272	rc3h2	100	79.965	Fundulus_heteroclitus
ENSMZEG00005017019	rc3h2	68	68.603	ENSGMOG00000016709	-	99	69.077	Gadus_morhua
ENSMZEG00005017019	rc3h2	93	58.084	ENSGALG00000001253	RC3H2	92	58.209	Gallus_gallus
ENSMZEG00005017019	rc3h2	96	81.176	ENSGAFG00000007679	rc3h2	100	80.633	Gambusia_affinis
ENSMZEG00005017019	rc3h2	74	80.925	ENSGACG00000017369	rc3h2	100	96.380	Gasterosteus_aculeatus
ENSMZEG00005017019	rc3h2	93	57.713	ENSGAGG00000018295	RC3H2	98	58.446	Gopherus_agassizii
ENSMZEG00005017019	rc3h2	93	55.556	ENSGGOG00000017062	RC3H2	95	87.389	Gorilla_gorilla
ENSMZEG00005017019	rc3h2	100	99.825	ENSHBUG00000003976	rc3h2	100	99.825	Haplochromis_burtoni
ENSMZEG00005017019	rc3h2	92	56.472	ENSHGLG00100018015	RC3H2	91	56.472	Heterocephalus_glaber_male
ENSMZEG00005017019	rc3h2	100	74.295	ENSHCOG00000003006	rc3h2	100	74.125	Hippocampus_comes
ENSMZEG00005017019	rc3h2	100	58.803	ENSIPUG00000021433	rc3h2	100	59.530	Ictalurus_punctatus
ENSMZEG00005017019	rc3h2	92	56.472	ENSSTOG00000010655	RC3H2	91	56.472	Ictidomys_tridecemlineatus
ENSMZEG00005017019	rc3h2	92	56.622	ENSJJAG00000022376	Rc3h2	91	56.622	Jaculus_jaculus
ENSMZEG00005017019	rc3h2	100	80.519	ENSKMAG00000010936	rc3h2	100	80.519	Kryptolebias_marmoratus
ENSMZEG00005017019	rc3h2	99	58.779	ENSLOCG00000002894	rc3h2	100	58.439	Lepisosteus_oculatus
ENSMZEG00005017019	rc3h2	92	56.533	ENSLAFG00000003521	RC3H2	91	56.800	Loxodonta_africana
ENSMZEG00005017019	rc3h2	84	87.783	ENSMFAG00000035621	RC3H2	95	87.389	Macaca_fascicularis
ENSMZEG00005017019	rc3h2	92	56.067	ENSMMUG00000021134	RC3H2	95	87.389	Macaca_mulatta
ENSMZEG00005017019	rc3h2	92	55.791	ENSMNEG00000031599	RC3H2	95	85.177	Macaca_nemestrina
ENSMZEG00005017019	rc3h2	92	56.067	ENSMLEG00000033809	RC3H2	95	87.389	Mandrillus_leucophaeus
ENSMZEG00005017019	rc3h2	93	57.825	ENSMGAG00000007984	RC3H2	92	57.951	Meleagris_gallopavo
ENSMZEG00005017019	rc3h2	73	62.419	ENSMAUG00000003117	Rc3h2	81	62.419	Mesocricetus_auratus
ENSMZEG00005017019	rc3h2	92	56.472	ENSMICG00000003227	RC3H2	95	87.168	Microcebus_murinus
ENSMZEG00005017019	rc3h2	92	56.383	ENSMOCG00000009592	Rc3h2	91	56.383	Microtus_ochrogaster
ENSMZEG00005017019	rc3h2	84	97.357	ENSMMOG00000021305	rc3h2	99	90.419	Mola_mola
ENSMZEG00005017019	rc3h2	93	56.716	ENSMODG00000019725	RC3H2	77	56.754	Monodelphis_domestica
ENSMZEG00005017019	rc3h2	92	57.856	MGP_CAROLIEiJ_G0023516	Rc3h2	99	84.310	Mus_caroli
ENSMZEG00005017019	rc3h2	92	56.560	ENSMUSG00000075376	Rc3h2	99	84.310	Mus_musculus
ENSMZEG00005017019	rc3h2	92	56.991	MGP_PahariEiJ_G0024969	Rc3h2	99	84.310	Mus_pahari
ENSMZEG00005017019	rc3h2	92	56.903	MGP_SPRETEiJ_G0024436	Rc3h2	99	84.310	Mus_spretus
ENSMZEG00005017019	rc3h2	92	56.687	ENSMPUG00000014141	RC3H2	91	56.953	Mustela_putorius_furo
ENSMZEG00005017019	rc3h2	92	56.599	ENSMLUG00000013992	RC3H2	91	56.814	Myotis_lucifugus
ENSMZEG00005017019	rc3h2	100	99.562	ENSNBRG00000009276	rc3h2	100	99.562	Neolamprologus_brichardi
ENSMZEG00005017019	rc3h2	92	55.556	ENSNLEG00000017204	RC3H2	95	87.389	Nomascus_leucogenys
ENSMZEG00005017019	rc3h2	53	87.747	ENSMEUG00000001299	-	55	87.747	Notamacropus_eugenii
ENSMZEG00005017019	rc3h2	68	56.489	ENSOPRG00000000135	RC3H2	68	68.577	Ochotona_princeps
ENSMZEG00005017019	rc3h2	100	97.834	ENSONIG00000003945	rc3h2	100	97.834	Oreochromis_niloticus
ENSMZEG00005017019	rc3h2	91	57.270	ENSOANG00000008194	RC3H2	99	57.538	Ornithorhynchus_anatinus
ENSMZEG00005017019	rc3h2	92	56.533	ENSOCUG00000008804	RC3H2	91	56.800	Oryctolagus_cuniculus
ENSMZEG00005017019	rc3h2	100	81.629	ENSORLG00000010018	rc3h2	100	81.629	Oryzias_latipes
ENSMZEG00005017019	rc3h2	100	81.629	ENSORLG00020013257	rc3h2	100	81.629	Oryzias_latipes_hni
ENSMZEG00005017019	rc3h2	100	81.023	ENSORLG00015001525	rc3h2	100	81.629	Oryzias_latipes_hsok
ENSMZEG00005017019	rc3h2	100	82.872	ENSOMEG00000023540	rc3h2	100	82.872	Oryzias_melastigma
ENSMZEG00005017019	rc3h2	92	56.499	ENSOGAG00000010678	RC3H2	91	56.764	Otolemur_garnettii
ENSMZEG00005017019	rc3h2	92	56.522	ENSOARG00000013965	RC3H2	91	56.788	Ovis_aries
ENSMZEG00005017019	rc3h2	92	55.880	ENSPPAG00000036013	RC3H2	95	87.611	Pan_paniscus
ENSMZEG00005017019	rc3h2	92	56.145	ENSPPRG00000008698	RC3H2	94	58.891	Panthera_pardus
ENSMZEG00005017019	rc3h2	92	56.145	ENSPTIG00000014257	RC3H2	94	58.891	Panthera_tigris_altaica
ENSMZEG00005017019	rc3h2	92	55.880	ENSPTRG00000021339	RC3H2	95	87.611	Pan_troglodytes
ENSMZEG00005017019	rc3h2	92	54.377	ENSPANG00000025840	RC3H2	94	83.850	Papio_anubis
ENSMZEG00005017019	rc3h2	99	65.714	ENSPKIG00000021910	rc3h2	96	65.595	Paramormyrops_kingsleyae
ENSMZEG00005017019	rc3h2	93	57.807	ENSPSIG00000005393	RC3H2	91	58.282	Pelodiscus_sinensis
ENSMZEG00005017019	rc3h2	85	94.808	ENSPMGG00000023963	rc3h2	95	94.808	Periophthalmus_magnuspinnatus
ENSMZEG00005017019	rc3h2	92	56.991	ENSPEMG00000023441	Rc3h2	91	56.991	Peromyscus_maniculatus_bairdii
ENSMZEG00005017019	rc3h2	84	88.209	ENSPCIG00000025559	RC3H2	90	88.009	Phascolarctos_cinereus
ENSMZEG00005017019	rc3h2	97	80.142	ENSPFOG00000019699	rc3h2	98	79.875	Poecilia_formosa
ENSMZEG00005017019	rc3h2	95	70.360	ENSPLAG00000005799	rc3h2	100	69.806	Poecilia_latipinna
ENSMZEG00005017019	rc3h2	97	80.499	ENSPMEG00000014187	rc3h2	98	80.232	Poecilia_mexicana
ENSMZEG00005017019	rc3h2	99	80.539	ENSPREG00000008979	rc3h2	100	80.104	Poecilia_reticulata
ENSMZEG00005017019	rc3h2	78	75.099	ENSPCAG00000010154	RC3H2	77	75.099	Procavia_capensis
ENSMZEG00005017019	rc3h2	100	98.700	ENSPNYG00000012063	rc3h2	100	98.700	Pundamilia_nyererei
ENSMZEG00005017019	rc3h2	100	63.307	ENSPNAG00000017502	rc3h2	100	63.221	Pygocentrus_nattereri
ENSMZEG00005017019	rc3h2	92	56.814	ENSRNOG00000009196	Rc3h2	94	56.814	Rattus_norvegicus
ENSMZEG00005017019	rc3h2	92	56.244	ENSRBIG00000032579	RC3H2	95	87.389	Rhinopithecus_bieti
ENSMZEG00005017019	rc3h2	92	56.156	ENSRROG00000043784	RC3H2	95	87.389	Rhinopithecus_roxellana
ENSMZEG00005017019	rc3h2	92	56.057	ENSSBOG00000029100	RC3H2	99	83.857	Saimiri_boliviensis_boliviensis
ENSMZEG00005017019	rc3h2	92	56.816	ENSSHAG00000007498	RC3H2	92	56.250	Sarcophilus_harrisii
ENSMZEG00005017019	rc3h2	100	86.391	ENSSMAG00000020048	rc3h2	100	86.563	Scophthalmus_maximus
ENSMZEG00005017019	rc3h2	100	89.014	ENSSDUG00000016022	rc3h2	100	89.014	Seriola_dumerili
ENSMZEG00005017019	rc3h2	100	88.927	ENSSLDG00000016070	rc3h2	100	88.927	Seriola_lalandi_dorsalis
ENSMZEG00005017019	rc3h2	92	56.433	ENSSARG00000012329	RC3H2	91	56.699	Sorex_araneus
ENSMZEG00005017019	rc3h2	93	57.105	ENSSPUG00000001457	RC3H2	92	57.317	Sphenodon_punctatus
ENSMZEG00005017019	rc3h2	100	89.879	ENSSPAG00000005233	rc3h2	100	90.398	Stegastes_partitus
ENSMZEG00005017019	rc3h2	92	56.664	ENSSSCG00000005575	RC3H2	93	87.168	Sus_scrofa
ENSMZEG00005017019	rc3h2	92	57.692	ENSTGUG00000006889	-	91	57.819	Taeniopygia_guttata
ENSMZEG00005017019	rc3h2	85	74.544	ENSTNIG00000004942	rc3h2	98	74.356	Tetraodon_nigroviridis
ENSMZEG00005017019	rc3h2	71	61.439	ENSTBEG00000009622	RC3H2	79	61.720	Tupaia_belangeri
ENSMZEG00005017019	rc3h2	87	66.278	ENSTTRG00000016954	RC3H2	84	66.667	Tursiops_truncatus
ENSMZEG00005017019	rc3h2	92	56.422	ENSUAMG00000015355	RC3H2	91	56.687	Ursus_americanus
ENSMZEG00005017019	rc3h2	92	56.422	ENSUMAG00000003161	RC3H2	95	87.389	Ursus_maritimus
ENSMZEG00005017019	rc3h2	92	55.841	ENSVPAG00000005994	RC3H2	91	56.106	Vicugna_pacos
ENSMZEG00005017019	rc3h2	92	56.333	ENSVVUG00000009519	RC3H2	94	56.599	Vulpes_vulpes
ENSMZEG00005017019	rc3h2	99	67.604	ENSXCOG00000005002	rc3h2	94	97.506	Xiphophorus_couchianus
ENSMZEG00005017019	rc3h2	99	80.626	ENSXMAG00000001724	rc3h2	100	80.104	Xiphophorus_maculatus