EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017186 (Gene tree)
Gene ID: -
Gene Symbol: arid4a
Alias: fc43f03|fi11g07|fi14h03|wu:fc43f03|wu:fi06c05|wu:fi11g07|wu:fi14h03|zgc:110391
Full Name: AT-rich interaction domain 4A
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 33466 bases
Position: chrLG19:1180442-1213907
Accession: 101464646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005022972	Tudor-knot	PF11717.8	2.1e-13	1	1
ENSMZEP00005022976	Tudor-knot	PF11717.8	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005023732	-	3369	XM_004564156	ENSMZEP00005022976	1122 (aa)	XP_004564213	-
ENSMZET00005023728	-	3378	-	ENSMZEP00005022972	1125 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005017186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017186	arid4a	87	53.882	ENSG00000032219	ARID4A	95	92.105	Homo_sapiens
ENSMZEG00005017186	arid4a	99	73.752	ENSAPOG00000018856	arid4a	84	77.295	Acanthochromis_polyacanthus
ENSMZEG00005017186	arid4a	81	57.971	ENSAMEG00000002532	ARID4A	93	50.200	Ailuropoda_melanoleuca
ENSMZEG00005017186	arid4a	100	73.345	ENSACIG00000021943	-	100	73.775	Amphilophus_citrinellus
ENSMZEG00005017186	arid4a	82	71.195	ENSAOCG00000004790	arid4a	86	71.686	Amphiprion_ocellaris
ENSMZEG00005017186	arid4a	99	71.880	ENSATEG00000014386	arid4a	82	72.611	Anabas_testudineus
ENSMZEG00005017186	arid4a	57	64.010	ENSAPLG00000006185	ARID4A	81	50.809	Anas_platyrhynchos
ENSMZEG00005017186	arid4a	76	51.677	ENSACAG00000014637	ARID4A	72	55.503	Anolis_carolinensis
ENSMZEG00005017186	arid4a	89	54.193	ENSANAG00000037559	ARID4A	63	63.549	Aotus_nancymaae
ENSMZEG00005017186	arid4a	100	100.000	ENSACLG00000005837	arid4a	100	100.000	Astatotilapia_calliptera
ENSMZEG00005017186	arid4a	84	62.963	ENSAMXG00000000379	arid4a	87	59.657	Astyanax_mexicanus
ENSMZEG00005017186	arid4a	92	59.129	ENSBTAG00000018898	ARID4A	85	55.118	Bos_taurus
ENSMZEG00005017186	arid4a	89	54.193	ENSCJAG00000018764	ARID4A	58	63.549	Callithrix_jacchus
ENSMZEG00005017186	arid4a	75	57.971	ENSCAFG00000023936	ARID4A	82	54.646	Canis_familiaris
ENSMZEG00005017186	arid4a	75	60.832	ENSCAFG00020008690	ARID4A	88	51.519	Canis_lupus_dingo
ENSMZEG00005017186	arid4a	92	57.025	ENSCHIG00000021589	ARID4A	75	54.016	Capra_hircus
ENSMZEG00005017186	arid4a	76	57.613	ENSTSYG00000013397	ARID4A	75	54.859	Carlito_syrichta
ENSMZEG00005017186	arid4a	84	55.698	ENSCCAG00000019639	ARID4A	72	56.543	Cebus_capucinus
ENSMZEG00005017186	arid4a	88	54.193	ENSCATG00000041635	ARID4A	75	54.803	Cercocebus_atys
ENSMZEG00005017186	arid4a	51	54.517	ENSCSAG00000014425	ARID4A	63	54.890	Chlorocebus_sabaeus
ENSMZEG00005017186	arid4a	73	68.293	ENSCHOG00000003408	ARID4A	68	65.854	Choloepus_hoffmanni
ENSMZEG00005017186	arid4a	67	52.834	ENSCPBG00000024815	ARID4A	75	55.292	Chrysemys_picta_bellii
ENSMZEG00005017186	arid4a	88	53.882	ENSCANG00000034778	ARID4A	75	54.488	Colobus_angolensis_palliatus
ENSMZEG00005017186	arid4a	81	57.438	ENSCGRG00001018168	Arid4a	87	54.101	Cricetulus_griseus_chok1gshd
ENSMZEG00005017186	arid4a	77	57.434	ENSCGRG00000005293	Arid4a	84	54.134	Cricetulus_griseus_crigri
ENSMZEG00005017186	arid4a	95	66.770	ENSCSEG00000011930	arid4a	83	70.317	Cynoglossus_semilaevis
ENSMZEG00005017186	arid4a	84	61.303	ENSDARG00000043873	arid4a	96	52.261	Danio_rerio
ENSMZEG00005017186	arid4a	74	58.125	ENSDNOG00000004090	ARID4A	58	63.158	Dasypus_novemcinctus
ENSMZEG00005017186	arid4a	93	51.359	ENSDORG00000002170	Arid4a	80	51.195	Dipodomys_ordii
ENSMZEG00005017186	arid4a	75	58.385	ENSEASG00005016222	ARID4A	81	54.646	Equus_asinus_asinus
ENSMZEG00005017186	arid4a	75	58.385	ENSECAG00000019256	ARID4A	82	54.646	Equus_caballus
ENSMZEG00005017186	arid4a	86	49.690	ENSEEUG00000001510	ARID4A	75	51.258	Erinaceus_europaeus
ENSMZEG00005017186	arid4a	94	56.811	ENSELUG00000003087	arid4a	87	56.829	Esox_lucius
ENSMZEG00005017186	arid4a	76	54.206	ENSFCAG00000019223	ARID4A	82	54.331	Felis_catus
ENSMZEG00005017186	arid4a	81	51.971	ENSFALG00000003561	ARID4A	87	52.006	Ficedula_albicollis
ENSMZEG00005017186	arid4a	65	58.421	ENSFDAG00000005958	-	57	63.158	Fukomys_damarensis
ENSMZEG00005017186	arid4a	99	71.317	ENSFHEG00000004741	arid4a	84	70.016	Fundulus_heteroclitus
ENSMZEG00005017186	arid4a	55	68.140	ENSGMOG00000017334	-	64	68.129	Gadus_morhua
ENSMZEG00005017186	arid4a	67	62.201	ENSGALG00000012037	ARID4A	65	64.269	Gallus_gallus
ENSMZEG00005017186	arid4a	93	69.005	ENSGACG00000004018	arid4a	99	59.048	Gasterosteus_aculeatus
ENSMZEG00005017186	arid4a	69	52.372	ENSGAGG00000012085	ARID4A	75	54.976	Gopherus_agassizii
ENSMZEG00005017186	arid4a	88	53.882	ENSGGOG00000027092	ARID4A	75	54.488	Gorilla_gorilla
ENSMZEG00005017186	arid4a	52	90.909	ENSHCOG00000021157	-	70	89.855	Hippocampus_comes
ENSMZEG00005017186	arid4a	98	58.963	ENSIPUG00000001971	arid4a	86	59.027	Ictalurus_punctatus
ENSMZEG00005017186	arid4a	81	57.676	ENSSTOG00000019680	ARID4A	75	54.331	Ictidomys_tridecemlineatus
ENSMZEG00005017186	arid4a	65	60.106	ENSJJAG00000016742	Arid4a	74	54.386	Jaculus_jaculus
ENSMZEG00005017186	arid4a	99	65.217	ENSKMAG00000018271	arid4a	85	68.289	Kryptolebias_marmoratus
ENSMZEG00005017186	arid4a	83	96.386	ENSLBEG00000018330	arid4a	78	96.386	Labrus_bergylta
ENSMZEG00005017186	arid4a	75	58.125	ENSLACG00000018876	ARID4A	66	64.390	Latimeria_chalumnae
ENSMZEG00005017186	arid4a	87	57.624	ENSLOCG00000009355	arid4a	90	53.961	Lepisosteus_oculatus
ENSMZEG00005017186	arid4a	74	58.178	ENSLAFG00000008653	ARID4A	75	55.189	Loxodonta_africana
ENSMZEG00005017186	arid4a	88	54.037	ENSMFAG00000037044	ARID4A	75	54.646	Macaca_fascicularis
ENSMZEG00005017186	arid4a	88	54.037	ENSMMUG00000003514	ARID4A	75	54.890	Macaca_mulatta
ENSMZEG00005017186	arid4a	88	54.037	ENSMNEG00000037476	ARID4A	75	54.890	Macaca_nemestrina
ENSMZEG00005017186	arid4a	88	54.037	ENSMLEG00000043095	ARID4A	75	54.890	Mandrillus_leucophaeus
ENSMZEG00005017186	arid4a	99	56.645	ENSMAMG00000006769	arid4a	99	59.106	Mastacembelus_armatus
ENSMZEG00005017186	arid4a	76	52.439	ENSMGAG00000013615	ARID4A	57	64.508	Meleagris_gallopavo
ENSMZEG00005017186	arid4a	63	57.569	ENSMAUG00000016160	Arid4a	69	53.454	Mesocricetus_auratus
ENSMZEG00005017186	arid4a	81	57.796	ENSMICG00000011761	ARID4A	87	54.245	Microcebus_murinus
ENSMZEG00005017186	arid4a	77	50.078	ENSMOCG00000010098	Arid4a	77	54.560	Microtus_ochrogaster
ENSMZEG00005017186	arid4a	93	65.655	ENSMMOG00000020283	arid4a	98	65.802	Mola_mola
ENSMZEG00005017186	arid4a	86	51.539	ENSMODG00000007881	ARID4A	88	50.668	Monodelphis_domestica
ENSMZEG00005017186	arid4a	98	65.701	ENSMALG00000019138	arid4a	89	74.032	Monopterus_albus
ENSMZEG00005017186	arid4a	73	58.506	MGP_CAROLIEiJ_G0017824	Arid4a	82	53.906	Mus_caroli
ENSMZEG00005017186	arid4a	73	57.938	ENSMUSG00000048118	Arid4a	82	54.075	Mus_musculus
ENSMZEG00005017186	arid4a	74	57.787	MGP_PahariEiJ_G0029580	Arid4a	76	54.560	Mus_pahari
ENSMZEG00005017186	arid4a	85	53.323	MGP_SPRETEiJ_G0018669	Arid4a	82	54.232	Mus_spretus
ENSMZEG00005017186	arid4a	75	57.971	ENSMPUG00000006137	ARID4A	75	53.459	Mustela_putorius_furo
ENSMZEG00005017186	arid4a	93	54.121	ENSMLUG00000012354	ARID4A	86	54.732	Myotis_lucifugus
ENSMZEG00005017186	arid4a	93	49.153	ENSNGAG00000015701	Arid4a	74	49.609	Nannospalax_galili
ENSMZEG00005017186	arid4a	88	54.193	ENSNLEG00000013149	ARID4A	58	63.462	Nomascus_leucogenys
ENSMZEG00005017186	arid4a	51	83.814	ENSONIG00000011016	arid4a	51	87.821	Oreochromis_niloticus
ENSMZEG00005017186	arid4a	51	56.124	ENSOANG00000011836	ARID4A	65	56.918	Ornithorhynchus_anatinus
ENSMZEG00005017186	arid4a	93	54.317	ENSOCUG00000001052	ARID4A	75	55.363	Oryctolagus_cuniculus
ENSMZEG00005017186	arid4a	99	59.799	ENSORLG00020001443	arid4a	100	59.932	Oryzias_latipes_hni
ENSMZEG00005017186	arid4a	81	57.025	ENSOGAG00000000385	ARID4A	87	53.931	Otolemur_garnettii
ENSMZEG00005017186	arid4a	81	58.230	ENSOARG00000021110	ARID4A	87	55.503	Ovis_aries
ENSMZEG00005017186	arid4a	88	53.882	ENSPPAG00000042713	ARID4A	75	54.488	Pan_paniscus
ENSMZEG00005017186	arid4a	76	54.361	ENSPPRG00000009142	ARID4A	82	54.331	Panthera_pardus
ENSMZEG00005017186	arid4a	76	54.361	ENSPTIG00000007597	ARID4A	82	54.331	Panthera_tigris_altaica
ENSMZEG00005017186	arid4a	88	53.882	ENSPTRG00000006393	ARID4A	75	54.488	Pan_troglodytes
ENSMZEG00005017186	arid4a	88	54.037	ENSPANG00000022390	ARID4A	75	54.890	Papio_anubis
ENSMZEG00005017186	arid4a	90	60.407	ENSPKIG00000015415	arid4a	81	67.192	Paramormyrops_kingsleyae
ENSMZEG00005017186	arid4a	80	51.812	ENSPSIG00000014845	ARID4A	74	54.844	Pelodiscus_sinensis
ENSMZEG00005017186	arid4a	57	62.378	ENSPMGG00000004133	-	54	63.420	Periophthalmus_magnuspinnatus
ENSMZEG00005017186	arid4a	56	58.091	ENSPEMG00000008231	Arid4a	58	62.590	Peromyscus_maniculatus_bairdii
ENSMZEG00005017186	arid4a	72	46.471	ENSPMAG00000005967	arid4a	56	68.750	Petromyzon_marinus
ENSMZEG00005017186	arid4a	93	53.911	ENSPCIG00000017482	ARID4A	86	52.949	Phascolarctos_cinereus
ENSMZEG00005017186	arid4a	97	72.828	ENSPFOG00000018637	arid4a	83	71.981	Poecilia_formosa
ENSMZEG00005017186	arid4a	97	72.828	ENSPLAG00000003432	arid4a	82	71.981	Poecilia_latipinna
ENSMZEG00005017186	arid4a	97	72.828	ENSPMEG00000010607	arid4a	83	71.981	Poecilia_mexicana
ENSMZEG00005017186	arid4a	88	53.571	ENSPPYG00000005857	ARID4A	58	63.070	Pongo_abelii
ENSMZEG00005017186	arid4a	62	63.483	ENSPCAG00000002099	ARID4A	65	57.754	Procavia_capensis
ENSMZEG00005017186	arid4a	81	57.796	ENSPCOG00000013924	ARID4A	75	54.646	Propithecus_coquereli
ENSMZEG00005017186	arid4a	87	52.574	ENSPVAG00000003866	ARID4A	74	54.167	Pteropus_vampyrus
ENSMZEG00005017186	arid4a	100	99.911	ENSPNYG00000009221	arid4a	100	99.911	Pundamilia_nyererei
ENSMZEG00005017186	arid4a	94	58.879	ENSPNAG00000000710	arid4a	86	58.044	Pygocentrus_nattereri
ENSMZEG00005017186	arid4a	81	56.701	ENSRNOG00000026239	Arid4a	59	61.631	Rattus_norvegicus
ENSMZEG00005017186	arid4a	88	54.083	ENSRBIG00000032944	ARID4A	75	54.803	Rhinopithecus_bieti
ENSMZEG00005017186	arid4a	88	54.083	ENSRROG00000034002	ARID4A	75	54.803	Rhinopithecus_roxellana
ENSMZEG00005017186	arid4a	89	54.489	ENSSBOG00000027453	ARID4A	65	63.549	Saimiri_boliviensis_boliviensis
ENSMZEG00005017186	arid4a	93	53.893	ENSSHAG00000018032	ARID4A	87	55.416	Sarcophilus_harrisii
ENSMZEG00005017186	arid4a	93	58.245	ENSSFOG00015019230	arid4a	73	57.385	Scleropages_formosus
ENSMZEG00005017186	arid4a	83	70.559	ENSSMAG00000012268	arid4a	93	69.391	Scophthalmus_maximus
ENSMZEG00005017186	arid4a	99	61.206	ENSSDUG00000000343	arid4a	99	62.024	Seriola_dumerili
ENSMZEG00005017186	arid4a	72	78.931	ENSSLDG00000022684	arid4a	76	85.467	Seriola_lalandi_dorsalis
ENSMZEG00005017186	arid4a	74	55.833	ENSSARG00000006966	ARID4A	76	53.712	Sorex_araneus
ENSMZEG00005017186	arid4a	74	60.837	ENSSPUG00000018360	ARID4A	69	62.250	Sphenodon_punctatus
ENSMZEG00005017186	arid4a	99	61.957	ENSSPAG00000004467	arid4a	85	77.184	Stegastes_partitus
ENSMZEG00005017186	arid4a	72	57.261	ENSSSCG00000005073	ARID4A	82	50.000	Sus_scrofa
ENSMZEG00005017186	arid4a	99	56.469	ENSTRUG00000008557	arid4a	100	54.931	Takifugu_rubripes
ENSMZEG00005017186	arid4a	91	65.217	ENSTNIG00000002593	arid4a	84	62.520	Tetraodon_nigroviridis
ENSMZEG00005017186	arid4a	75	60.832	ENSUAMG00000007706	ARID4A	88	49.655	Ursus_americanus
ENSMZEG00005017186	arid4a	75	57.971	ENSUMAG00000016791	ARID4A	88	50.000	Ursus_maritimus
ENSMZEG00005017186	arid4a	78	56.485	ENSVPAG00000003645	ARID4A	82	52.756	Vicugna_pacos
ENSMZEG00005017186	arid4a	97	49.471	ENSVVUG00000029542	ARID4A	88	50.000	Vulpes_vulpes
ENSMZEG00005017186	arid4a	76	54.914	ENSXETG00000011968	arid4a	98	54.545	Xenopus_tropicalis
ENSMZEG00005017186	arid4a	99	67.964	ENSXMAG00000004904	arid4a	82	71.820	Xiphophorus_maculatus