EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017235 (Gene tree)
Gene ID: 101477525
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11709 bases
Position: chrLG9:5266427-5278135
Accession: 101477525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023013	MMR_HSR1	PF01926.23	9.5e-08	1	1
ENSMZEP00005023018	MMR_HSR1	PF01926.23	8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005023775	-	543	-	ENSMZEP00005023018	180 (aa)	-	-
ENSMZET00005023770	-	2660	XM_004568514	ENSMZEP00005023013	204 (aa)	XP_004568571	UPI000329F427

Gene Model

Click here to download ENSMZEG00005017235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017235	rab18a	100	97.549	ENSAPOG00000010760	rab18a	100	97.549	Acanthochromis_polyacanthus
ENSMZEG00005017235	rab18a	100	97.778	ENSACIG00000009617	rab18a	100	97.778	Amphilophus_citrinellus
ENSMZEG00005017235	rab18a	100	98.039	ENSAOCG00000016233	rab18a	100	98.039	Amphiprion_ocellaris
ENSMZEG00005017235	rab18a	100	98.039	ENSAPEG00000005392	rab18a	100	98.039	Amphiprion_percula
ENSMZEG00005017235	rab18a	100	96.078	ENSATEG00000021911	rab18a	100	96.078	Anabas_testudineus
ENSMZEG00005017235	rab18a	100	85.854	ENSACAG00000005463	-	100	85.854	Anolis_carolinensis
ENSMZEG00005017235	rab18a	100	99.510	ENSACLG00000011484	rab18a	100	99.510	Astatotilapia_calliptera
ENSMZEG00005017235	rab18a	100	83.981	ENSCPBG00000015839	-	100	83.981	Chrysemys_picta_bellii
ENSMZEG00005017235	rab18a	96	69.154	ENSCPBG00000027619	-	98	69.154	Chrysemys_picta_bellii
ENSMZEG00005017235	rab18a	97	74.242	ENSCING00000006838	-	99	74.242	Ciona_intestinalis
ENSMZEG00005017235	rab18a	97	73.232	ENSCSAVG00000010348	-	99	73.232	Ciona_savignyi
ENSMZEG00005017235	rab18a	100	94.608	ENSCSEG00000011816	rab18a	100	94.608	Cynoglossus_semilaevis
ENSMZEG00005017235	rab18a	94	95.312	ENSCVAG00000015451	rab18a	100	94.118	Cyprinodon_variegatus
ENSMZEG00005017235	rab18a	100	81.463	ENSDARG00000055291	rab18a	100	81.463	Danio_rerio
ENSMZEG00005017235	rab18a	100	91.220	ENSELUG00000003805	rab18a	100	91.220	Esox_lucius
ENSMZEG00005017235	rab18a	94	96.875	ENSFHEG00000019455	rab18a	100	95.588	Fundulus_heteroclitus
ENSMZEG00005017235	rab18a	94	95.812	ENSGAFG00000002790	rab18a	100	94.118	Gambusia_affinis
ENSMZEG00005017235	rab18a	100	83.981	ENSGAGG00000015642	-	100	83.981	Gopherus_agassizii
ENSMZEG00005017235	rab18a	100	99.510	ENSHBUG00000001518	rab18a	100	99.510	Haplochromis_burtoni
ENSMZEG00005017235	rab18a	99	97.044	ENSLBEG00000005861	rab18a	95	97.044	Labrus_bergylta
ENSMZEG00005017235	rab18a	93	87.895	ENSLACG00000009310	rab18a	100	85.437	Latimeria_chalumnae
ENSMZEG00005017235	rab18a	100	87.805	ENSLOCG00000007491	rab18a	100	87.805	Lepisosteus_oculatus
ENSMZEG00005017235	rab18a	100	94.608	ENSMAMG00000014320	rab18a	100	94.608	Mastacembelus_armatus
ENSMZEG00005017235	rab18a	100	96.569	ENSMALG00000009813	rab18a	100	96.569	Monopterus_albus
ENSMZEG00005017235	rab18a	100	99.510	ENSNBRG00000013507	rab18a	100	99.510	Neolamprologus_brichardi
ENSMZEG00005017235	rab18a	94	96.875	ENSORLG00000004624	rab18a	100	96.078	Oryzias_latipes
ENSMZEG00005017235	rab18a	100	96.569	ENSORLG00020008333	rab18a	100	96.569	Oryzias_latipes_hni
ENSMZEG00005017235	rab18a	94	96.354	ENSORLG00015004739	rab18a	100	95.588	Oryzias_latipes_hsok
ENSMZEG00005017235	rab18a	100	96.078	ENSOMEG00000020605	rab18a	100	96.078	Oryzias_melastigma
ENSMZEG00005017235	rab18a	100	86.829	ENSPKIG00000009825	rab18a	100	86.829	Paramormyrops_kingsleyae
ENSMZEG00005017235	rab18a	100	93.137	ENSPMGG00000020409	-	100	93.137	Periophthalmus_magnuspinnatus
ENSMZEG00005017235	rab18a	94	96.335	ENSPFOG00000007571	rab18a	100	94.608	Poecilia_formosa
ENSMZEG00005017235	rab18a	94	96.335	ENSPLAG00000010104	rab18a	100	94.608	Poecilia_latipinna
ENSMZEG00005017235	rab18a	94	96.335	ENSPMEG00000013085	rab18a	100	94.608	Poecilia_mexicana
ENSMZEG00005017235	rab18a	94	96.335	ENSPREG00000005923	rab18a	83	94.608	Poecilia_reticulata
ENSMZEG00005017235	rab18a	100	99.510	ENSPNYG00000007064	rab18a	100	99.510	Pundamilia_nyererei
ENSMZEG00005017235	rab18a	97	81.000	ENSPNAG00000011548	rab18a	100	81.000	Pygocentrus_nattereri
ENSMZEG00005017235	rab18a	100	89.756	ENSSFOG00015017444	rab18a	84	89.756	Scleropages_formosus
ENSMZEG00005017235	rab18a	94	94.301	ENSSMAG00000002969	rab18a	100	93.659	Scophthalmus_maximus
ENSMZEG00005017235	rab18a	94	96.875	ENSSDUG00000003823	rab18a	100	96.078	Seriola_dumerili
ENSMZEG00005017235	rab18a	94	96.875	ENSSLDG00000006977	rab18a	100	96.078	Seriola_lalandi_dorsalis
ENSMZEG00005017235	rab18a	93	88.360	ENSSPUG00000017677	-	100	85.437	Sphenodon_punctatus
ENSMZEG00005017235	rab18a	100	92.157	ENSTRUG00000004984	rab18a	100	92.157	Takifugu_rubripes
ENSMZEG00005017235	rab18a	100	86.408	ENSUMAG00000015574	-	100	86.408	Ursus_maritimus
ENSMZEG00005017235	rab18a	100	86.408	ENSXETG00000004556	rab18	100	86.893	Xenopus_tropicalis
ENSMZEG00005017235	rab18a	94	96.335	ENSXMAG00000024122	rab18a	100	94.608	Xiphophorus_maculatus