EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017292 (Gene tree)
Gene ID: 101484619
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 12211 bases
Position: chrLG7:39563884-39576094
Accession: 101484619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023088	RTC	PF01137.21	3.2e-58	1	1
ENSMZEP00005023088	RTC_insert	PF05189.13	5.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005023845	-	3438	XM_004538278	ENSMZEP00005023088	372 (aa)	XP_004538335	UPI0003297674

Gene Model

Click here to download ENSMZEG00005017292's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017292	rcl1	99	78.919	ENSG00000120158	RCL1	100	82.870	Homo_sapiens
ENSMZEG00005017292	rcl1	100	89.785	ENSAPOG00000015666	rcl1	100	89.785	Acanthochromis_polyacanthus
ENSMZEG00005017292	rcl1	99	80.000	ENSAMEG00000002631	RCL1	99	80.000	Ailuropoda_melanoleuca
ENSMZEG00005017292	rcl1	100	93.280	ENSACIG00000021195	rcl1	100	93.280	Amphilophus_citrinellus
ENSMZEG00005017292	rcl1	100	88.172	ENSAOCG00000002223	rcl1	100	88.172	Amphiprion_ocellaris
ENSMZEG00005017292	rcl1	100	88.710	ENSAPEG00000006905	rcl1	100	88.710	Amphiprion_percula
ENSMZEG00005017292	rcl1	100	88.441	ENSATEG00000020026	rcl1	100	88.441	Anabas_testudineus
ENSMZEG00005017292	rcl1	88	76.900	ENSAPLG00000006031	RCL1	100	76.900	Anas_platyrhynchos
ENSMZEG00005017292	rcl1	99	74.054	ENSACAG00000003640	RCL1	99	74.054	Anolis_carolinensis
ENSMZEG00005017292	rcl1	99	78.378	ENSANAG00000037372	RCL1	99	78.378	Aotus_nancymaae
ENSMZEG00005017292	rcl1	100	100.000	ENSACLG00000021724	rcl1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005017292	rcl1	99	80.978	ENSAMXG00000033394	rcl1	99	80.978	Astyanax_mexicanus
ENSMZEG00005017292	rcl1	99	46.825	WBGene00022852	ZK1127.5	99	46.825	Caenorhabditis_elegans
ENSMZEG00005017292	rcl1	99	78.649	ENSCJAG00000011202	RCL1	99	78.649	Callithrix_jacchus
ENSMZEG00005017292	rcl1	99	79.730	ENSCAFG00000002091	RCL1	99	79.730	Canis_familiaris
ENSMZEG00005017292	rcl1	99	79.730	ENSCAFG00020000638	RCL1	77	79.730	Canis_lupus_dingo
ENSMZEG00005017292	rcl1	99	78.649	ENSCHIG00000012407	RCL1	99	78.649	Capra_hircus
ENSMZEG00005017292	rcl1	88	80.793	ENSTSYG00000009592	RCL1	97	83.516	Carlito_syrichta
ENSMZEG00005017292	rcl1	66	66.667	ENSCAPG00000013575	RCL1	100	66.667	Cavia_aperea
ENSMZEG00005017292	rcl1	99	78.649	ENSCPOG00000015354	RCL1	99	78.649	Cavia_porcellus
ENSMZEG00005017292	rcl1	99	78.649	ENSCCAG00000033505	RCL1	97	81.967	Cebus_capucinus
ENSMZEG00005017292	rcl1	99	78.649	ENSCATG00000034721	RCL1	97	82.418	Cercocebus_atys
ENSMZEG00005017292	rcl1	99	78.378	ENSCLAG00000007445	RCL1	99	78.378	Chinchilla_lanigera
ENSMZEG00005017292	rcl1	99	78.649	ENSCSAG00000008811	RCL1	99	78.649	Chlorocebus_sabaeus
ENSMZEG00005017292	rcl1	86	69.279	ENSCHOG00000007216	RCL1	99	69.279	Choloepus_hoffmanni
ENSMZEG00005017292	rcl1	100	76.203	ENSCPBG00000025481	RCL1	94	76.970	Chrysemys_picta_bellii
ENSMZEG00005017292	rcl1	99	60.000	ENSCING00000019565	-	98	60.000	Ciona_intestinalis
ENSMZEG00005017292	rcl1	99	78.649	ENSCANG00000027099	RCL1	99	78.649	Colobus_angolensis_palliatus
ENSMZEG00005017292	rcl1	99	79.189	ENSCGRG00001013748	Rcl1	99	79.189	Cricetulus_griseus_chok1gshd
ENSMZEG00005017292	rcl1	88	80.243	ENSCGRG00000005843	Rcl1	99	80.243	Cricetulus_griseus_crigri
ENSMZEG00005017292	rcl1	100	88.441	ENSCSEG00000000712	rcl1	98	88.441	Cynoglossus_semilaevis
ENSMZEG00005017292	rcl1	100	91.667	ENSCVAG00000011536	rcl1	100	91.667	Cyprinodon_variegatus
ENSMZEG00005017292	rcl1	99	79.837	ENSDARG00000038312	rcl1	100	79.837	Danio_rerio
ENSMZEG00005017292	rcl1	72	80.827	ENSDNOG00000019911	RCL1	100	83.333	Dasypus_novemcinctus
ENSMZEG00005017292	rcl1	99	80.000	ENSDORG00000015645	Rcl1	99	80.000	Dipodomys_ordii
ENSMZEG00005017292	rcl1	98	54.717	FBgn0020909	Rtc1	97	55.526	Drosophila_melanogaster
ENSMZEG00005017292	rcl1	88	54.268	ENSETEG00000014087	-	100	54.268	Echinops_telfairi
ENSMZEG00005017292	rcl1	100	55.496	ENSEBUG00000016621	-	99	55.496	Eptatretus_burgeri
ENSMZEG00005017292	rcl1	99	78.649	ENSEASG00005010653	RCL1	99	78.649	Equus_asinus_asinus
ENSMZEG00005017292	rcl1	99	78.649	ENSECAG00000015973	RCL1	99	78.649	Equus_caballus
ENSMZEG00005017292	rcl1	99	67.568	ENSEEUG00000009801	RCL1	99	67.568	Erinaceus_europaeus
ENSMZEG00005017292	rcl1	100	80.108	ENSELUG00000007353	rcl1	100	80.108	Esox_lucius
ENSMZEG00005017292	rcl1	99	78.919	ENSFCAG00000014557	RCL1	99	78.919	Felis_catus
ENSMZEG00005017292	rcl1	100	70.699	ENSFALG00000010553	RCL1	98	70.699	Ficedula_albicollis
ENSMZEG00005017292	rcl1	88	77.744	ENSFDAG00000004209	RCL1	100	77.744	Fukomys_damarensis
ENSMZEG00005017292	rcl1	100	90.860	ENSFHEG00000011228	rcl1	100	90.860	Fundulus_heteroclitus
ENSMZEG00005017292	rcl1	100	81.720	ENSGMOG00000004677	rcl1	100	81.720	Gadus_morhua
ENSMZEG00005017292	rcl1	99	74.865	ENSGALG00000015024	RCL1	99	74.865	Gallus_gallus
ENSMZEG00005017292	rcl1	100	90.860	ENSGAFG00000007257	rcl1	100	90.860	Gambusia_affinis
ENSMZEG00005017292	rcl1	100	87.366	ENSGACG00000017474	rcl1	100	87.366	Gasterosteus_aculeatus
ENSMZEG00005017292	rcl1	100	75.936	ENSGAGG00000003689	RCL1	100	75.936	Gopherus_agassizii
ENSMZEG00005017292	rcl1	99	78.378	ENSGGOG00000015041	RCL1	97	81.868	Gorilla_gorilla
ENSMZEG00005017292	rcl1	100	99.194	ENSHBUG00000001393	rcl1	100	99.194	Haplochromis_burtoni
ENSMZEG00005017292	rcl1	99	78.378	ENSHGLG00000016452	RCL1	99	78.378	Heterocephalus_glaber_female
ENSMZEG00005017292	rcl1	99	65.854	ENSHGLG00000005368	-	99	65.854	Heterocephalus_glaber_female
ENSMZEG00005017292	rcl1	99	73.514	ENSHGLG00100008718	-	99	73.514	Heterocephalus_glaber_male
ENSMZEG00005017292	rcl1	99	66.667	ENSHGLG00100018010	-	99	66.667	Heterocephalus_glaber_male
ENSMZEG00005017292	rcl1	100	89.516	ENSHCOG00000020170	rcl1	100	89.516	Hippocampus_comes
ENSMZEG00005017292	rcl1	100	82.796	ENSIPUG00000018054	RCL1	100	82.796	Ictalurus_punctatus
ENSMZEG00005017292	rcl1	99	78.378	ENSSTOG00000000023	RCL1	99	78.378	Ictidomys_tridecemlineatus
ENSMZEG00005017292	rcl1	54	63.366	ENSJJAG00000000764	-	98	63.366	Jaculus_jaculus
ENSMZEG00005017292	rcl1	99	79.189	ENSJJAG00000022803	-	99	79.189	Jaculus_jaculus
ENSMZEG00005017292	rcl1	99	69.459	ENSJJAG00000015632	-	99	69.459	Jaculus_jaculus
ENSMZEG00005017292	rcl1	100	89.247	ENSKMAG00000011946	rcl1	100	89.247	Kryptolebias_marmoratus
ENSMZEG00005017292	rcl1	100	83.871	ENSLBEG00000003957	rcl1	100	83.871	Labrus_bergylta
ENSMZEG00005017292	rcl1	93	74.277	ENSLACG00000004594	RCL1	100	78.571	Latimeria_chalumnae
ENSMZEG00005017292	rcl1	100	81.989	ENSLOCG00000010148	rcl1	98	81.989	Lepisosteus_oculatus
ENSMZEG00005017292	rcl1	99	78.108	ENSLAFG00000017495	RCL1	99	78.108	Loxodonta_africana
ENSMZEG00005017292	rcl1	99	78.649	ENSMFAG00000037906	RCL1	99	78.649	Macaca_fascicularis
ENSMZEG00005017292	rcl1	99	78.649	ENSMNEG00000012288	RCL1	97	82.418	Macaca_nemestrina
ENSMZEG00005017292	rcl1	99	78.649	ENSMLEG00000043088	RCL1	99	78.649	Mandrillus_leucophaeus
ENSMZEG00005017292	rcl1	100	90.591	ENSMAMG00000008311	rcl1	100	90.591	Mastacembelus_armatus
ENSMZEG00005017292	rcl1	58	75.909	ENSMGAG00000002245	RCL1	100	75.909	Meleagris_gallopavo
ENSMZEG00005017292	rcl1	58	82.870	ENSMAUG00000008922	Rcl1	100	82.870	Mesocricetus_auratus
ENSMZEG00005017292	rcl1	99	79.404	ENSMICG00000015562	RCL1	99	79.404	Microcebus_murinus
ENSMZEG00005017292	rcl1	99	79.189	ENSMOCG00000012145	Rcl1	99	79.189	Microtus_ochrogaster
ENSMZEG00005017292	rcl1	100	85.255	ENSMMOG00000021264	rcl1	100	85.255	Mola_mola
ENSMZEG00005017292	rcl1	95	77.273	ENSMODG00000015377	RCL1	93	77.273	Monodelphis_domestica
ENSMZEG00005017292	rcl1	100	89.516	ENSMALG00000018618	rcl1	100	89.516	Monopterus_albus
ENSMZEG00005017292	rcl1	99	78.919	MGP_CAROLIEiJ_G0022853	Rcl1	99	78.919	Mus_caroli
ENSMZEG00005017292	rcl1	99	78.378	ENSMUSG00000024785	Rcl1	99	78.378	Mus_musculus
ENSMZEG00005017292	rcl1	99	78.919	MGP_PahariEiJ_G0014346	Rcl1	100	81.871	Mus_pahari
ENSMZEG00005017292	rcl1	99	78.378	MGP_SPRETEiJ_G0023771	Rcl1	100	81.287	Mus_spretus
ENSMZEG00005017292	rcl1	99	79.730	ENSMPUG00000004998	RCL1	99	79.730	Mustela_putorius_furo
ENSMZEG00005017292	rcl1	99	77.838	ENSMLUG00000009654	RCL1	99	77.838	Myotis_lucifugus
ENSMZEG00005017292	rcl1	99	78.919	ENSNGAG00000015327	Rcl1	99	78.919	Nannospalax_galili
ENSMZEG00005017292	rcl1	92	95.335	ENSNBRG00000019854	rcl1	99	91.185	Neolamprologus_brichardi
ENSMZEG00005017292	rcl1	99	76.216	ENSNLEG00000008891	RCL1	99	76.216	Nomascus_leucogenys
ENSMZEG00005017292	rcl1	99	71.892	ENSMEUG00000007653	RCL1	99	71.892	Notamacropus_eugenii
ENSMZEG00005017292	rcl1	99	77.027	ENSOPRG00000010965	RCL1	99	77.027	Ochotona_princeps
ENSMZEG00005017292	rcl1	88	66.869	ENSODEG00000004151	RCL1	96	66.869	Octodon_degus
ENSMZEG00005017292	rcl1	100	98.118	ENSONIG00000003871	rcl1	100	98.118	Oreochromis_niloticus
ENSMZEG00005017292	rcl1	66	77.510	ENSOANG00000013193	-	98	77.510	Ornithorhynchus_anatinus
ENSMZEG00005017292	rcl1	99	78.378	ENSOCUG00000008161	RCL1	99	78.378	Oryctolagus_cuniculus
ENSMZEG00005017292	rcl1	100	86.828	ENSORLG00000010443	rcl1	100	86.828	Oryzias_latipes
ENSMZEG00005017292	rcl1	100	87.097	ENSORLG00020012211	rcl1	100	87.097	Oryzias_latipes_hni
ENSMZEG00005017292	rcl1	100	86.559	ENSORLG00015001122	rcl1	100	86.559	Oryzias_latipes_hsok
ENSMZEG00005017292	rcl1	100	88.978	ENSOMEG00000022976	rcl1	88	88.978	Oryzias_melastigma
ENSMZEG00005017292	rcl1	99	78.108	ENSOGAG00000007480	RCL1	99	78.108	Otolemur_garnettii
ENSMZEG00005017292	rcl1	99	78.649	ENSOARG00000013463	RCL1	99	78.649	Ovis_aries
ENSMZEG00005017292	rcl1	99	78.649	ENSPPAG00000037958	RCL1	99	78.649	Pan_paniscus
ENSMZEG00005017292	rcl1	99	78.378	ENSPPRG00000022645	RCL1	96	82.123	Panthera_pardus
ENSMZEG00005017292	rcl1	88	79.511	ENSPTIG00000019031	RCL1	100	81.944	Panthera_tigris_altaica
ENSMZEG00005017292	rcl1	99	78.378	ENSPTRG00000020743	RCL1	97	82.418	Pan_troglodytes
ENSMZEG00005017292	rcl1	99	78.649	ENSPANG00000025151	RCL1	99	78.649	Papio_anubis
ENSMZEG00005017292	rcl1	100	81.452	ENSPKIG00000021022	rcl1	100	81.452	Paramormyrops_kingsleyae
ENSMZEG00005017292	rcl1	88	77.204	ENSPSIG00000012302	RCL1	100	77.204	Pelodiscus_sinensis
ENSMZEG00005017292	rcl1	100	87.366	ENSPMGG00000024007	rcl1	100	87.366	Periophthalmus_magnuspinnatus
ENSMZEG00005017292	rcl1	99	79.189	ENSPEMG00000023275	Rcl1	99	79.189	Peromyscus_maniculatus_bairdii
ENSMZEG00005017292	rcl1	97	30.601	ENSPMAG00000009110	rtca	96	30.601	Petromyzon_marinus
ENSMZEG00005017292	rcl1	99	77.568	ENSPCIG00000000188	RCL1	99	77.568	Phascolarctos_cinereus
ENSMZEG00005017292	rcl1	100	91.129	ENSPFOG00000019682	rcl1	99	91.129	Poecilia_formosa
ENSMZEG00005017292	rcl1	100	91.129	ENSPLAG00000022354	rcl1	100	91.129	Poecilia_latipinna
ENSMZEG00005017292	rcl1	100	91.129	ENSPMEG00000008131	rcl1	100	91.129	Poecilia_mexicana
ENSMZEG00005017292	rcl1	100	90.591	ENSPREG00000008032	rcl1	100	90.591	Poecilia_reticulata
ENSMZEG00005017292	rcl1	99	79.189	ENSPPYG00000019244	RCL1	99	79.189	Pongo_abelii
ENSMZEG00005017292	rcl1	99	72.973	ENSPCAG00000001440	RCL1	99	72.973	Procavia_capensis
ENSMZEG00005017292	rcl1	99	79.459	ENSPCOG00000009611	RCL1	97	82.967	Propithecus_coquereli
ENSMZEG00005017292	rcl1	99	78.378	ENSPVAG00000015752	RCL1	99	78.378	Pteropus_vampyrus
ENSMZEG00005017292	rcl1	100	99.194	ENSPNYG00000012910	rcl1	100	99.194	Pundamilia_nyererei
ENSMZEG00005017292	rcl1	99	82.880	ENSPNAG00000028307	rcl1	91	82.880	Pygocentrus_nattereri
ENSMZEG00005017292	rcl1	99	78.649	ENSRNOG00000015491	Rcl1	99	78.649	Rattus_norvegicus
ENSMZEG00005017292	rcl1	99	78.378	ENSRBIG00000035818	RCL1	99	78.378	Rhinopithecus_bieti
ENSMZEG00005017292	rcl1	99	78.649	ENSRROG00000029781	RCL1	97	82.418	Rhinopithecus_roxellana
ENSMZEG00005017292	rcl1	98	37.297	YOL010W	-	97	37.297	Saccharomyces_cerevisiae
ENSMZEG00005017292	rcl1	99	78.919	ENSSBOG00000026369	RCL1	97	82.514	Saimiri_boliviensis_boliviensis
ENSMZEG00005017292	rcl1	89	78.550	ENSSHAG00000014086	RCL1	100	78.550	Sarcophilus_harrisii
ENSMZEG00005017292	rcl1	100	81.183	ENSSFOG00015023020	rcl1	100	81.183	Scleropages_formosus
ENSMZEG00005017292	rcl1	100	90.323	ENSSMAG00000019751	rcl1	86	90.323	Scophthalmus_maximus
ENSMZEG00005017292	rcl1	100	91.398	ENSSDUG00000006349	rcl1	100	91.398	Seriola_dumerili
ENSMZEG00005017292	rcl1	100	91.129	ENSSLDG00000022076	rcl1	100	91.129	Seriola_lalandi_dorsalis
ENSMZEG00005017292	rcl1	99	78.919	ENSSARG00000009260	RCL1	99	78.919	Sorex_araneus
ENSMZEG00005017292	rcl1	99	76.486	ENSSPUG00000016330	RCL1	99	76.486	Sphenodon_punctatus
ENSMZEG00005017292	rcl1	100	89.785	ENSSPAG00000018038	rcl1	100	89.785	Stegastes_partitus
ENSMZEG00005017292	rcl1	99	78.919	ENSSSCG00000005217	RCL1	82	78.919	Sus_scrofa
ENSMZEG00005017292	rcl1	99	74.462	ENSTGUG00000005138	RCL1	99	74.462	Taeniopygia_guttata
ENSMZEG00005017292	rcl1	100	87.097	ENSTRUG00000010493	rcl1	100	87.097	Takifugu_rubripes
ENSMZEG00005017292	rcl1	100	83.602	ENSTNIG00000013214	rcl1	99	83.602	Tetraodon_nigroviridis
ENSMZEG00005017292	rcl1	99	74.324	ENSTBEG00000016339	RCL1	99	74.324	Tupaia_belangeri
ENSMZEG00005017292	rcl1	99	78.378	ENSTTRG00000016525	RCL1	99	78.378	Tursiops_truncatus
ENSMZEG00005017292	rcl1	99	80.000	ENSUAMG00000005598	RCL1	99	80.625	Ursus_americanus
ENSMZEG00005017292	rcl1	88	80.488	ENSUMAG00000017890	RCL1	97	80.488	Ursus_maritimus
ENSMZEG00005017292	rcl1	88	79.878	ENSVPAG00000009188	RCL1	100	79.878	Vicugna_pacos
ENSMZEG00005017292	rcl1	88	81.155	ENSVVUG00000007304	RCL1	89	81.155	Vulpes_vulpes
ENSMZEG00005017292	rcl1	100	72.000	ENSXETG00000000592	rcl1	100	72.000	Xenopus_tropicalis
ENSMZEG00005017292	rcl1	58	30.698	ENSXCOG00000008002	rtca	62	30.698	Xiphophorus_couchianus
ENSMZEG00005017292	rcl1	100	91.398	ENSXCOG00000004922	rcl1	100	91.398	Xiphophorus_couchianus
ENSMZEG00005017292	rcl1	100	91.398	ENSXMAG00000022366	RCL1	100	91.398	Xiphophorus_maculatus