EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017438 (Gene tree)
Gene ID: 101487492
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 7896 bases
Position: chrLG15:29833015-29840910
Accession: 101487492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023298	RRM_1	PF00076.22	1.9e-57	1	4
ENSMZEP00005023298	RRM_1	PF00076.22	1.9e-57	2	4
ENSMZEP00005023298	RRM_1	PF00076.22	1.9e-57	3	4
ENSMZEP00005023298	RRM_1	PF00076.22	1.9e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024059	-	3450	XM_004561988	ENSMZEP00005023298	696 (aa)	XP_004562045	UPI000329D1D3

Gene Model

Click here to download ENSMZEG00005017438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017438	ncl	66	40.452	ENSAPOG00000014534	-	67	43.081	Acanthochromis_polyacanthus
ENSMZEG00005017438	ncl	60	81.429	ENSAPOG00000023888	ncl	59	81.429	Acanthochromis_polyacanthus
ENSMZEG00005017438	ncl	70	91.057	ENSACIG00000013234	ncl	62	90.515	Amphilophus_citrinellus
ENSMZEG00005017438	ncl	71	38.667	ENSAOCG00000014792	-	61	42.746	Amphiprion_ocellaris
ENSMZEG00005017438	ncl	60	81.710	ENSAPEG00000002769	ncl	59	81.710	Amphiprion_percula
ENSMZEG00005017438	ncl	71	38.476	ENSAPEG00000013612	-	60	42.487	Amphiprion_percula
ENSMZEG00005017438	ncl	61	45.714	ENSATEG00000019862	-	80	47.423	Anabas_testudineus
ENSMZEG00005017438	ncl	66	79.355	ENSATEG00000013343	ncl	60	79.762	Anabas_testudineus
ENSMZEG00005017438	ncl	53	62.730	ENSACAG00000001006	-	52	62.632	Anolis_carolinensis
ENSMZEG00005017438	ncl	52	95.380	ENSACLG00000026031	ncl	82	95.380	Astatotilapia_calliptera
ENSMZEG00005017438	ncl	58	65.610	ENSAMXG00000001647	ncl	80	69.000	Astyanax_mexicanus
ENSMZEG00005017438	ncl	89	51.314	ENSCPBG00000016444	-	56	62.797	Chrysemys_picta_bellii
ENSMZEG00005017438	ncl	70	75.532	ENSCSEG00000015089	ncl	54	75.532	Cynoglossus_semilaevis
ENSMZEG00005017438	ncl	52	77.657	ENSCVAG00000012600	ncl	61	76.190	Cyprinodon_variegatus
ENSMZEG00005017438	ncl	60	72.813	ENSDARG00000002710	ncl	79	73.139	Danio_rerio
ENSMZEG00005017438	ncl	75	44.416	ENSDNOG00000031611	-	66	45.283	Dasypus_novemcinctus
ENSMZEG00005017438	ncl	61	47.907	ENSDNOG00000040257	-	72	46.991	Dasypus_novemcinctus
ENSMZEG00005017438	ncl	60	71.059	ENSELUG00000006033	ncl	60	68.734	Esox_lucius
ENSMZEG00005017438	ncl	58	48.403	ENSELUG00000022826	-	81	50.532	Esox_lucius
ENSMZEG00005017438	ncl	72	58.466	ENSFALG00000007592	-	55	57.963	Ficedula_albicollis
ENSMZEG00005017438	ncl	67	76.757	ENSFHEG00000018000	ncl	72	76.757	Fundulus_heteroclitus
ENSMZEG00005017438	ncl	54	66.667	ENSGMOG00000001341	ncl	59	66.310	Gadus_morhua
ENSMZEG00005017438	ncl	53	59.682	ENSGALG00000032930	NCL	55	59.162	Gallus_gallus
ENSMZEG00005017438	ncl	67	67.391	ENSGAFG00000015375	ncl	50	77.297	Gambusia_affinis
ENSMZEG00005017438	ncl	89	69.537	ENSGACG00000008970	ncl	60	77.419	Gasterosteus_aculeatus
ENSMZEG00005017438	ncl	89	49.847	ENSGAGG00000013330	-	56	61.478	Gopherus_agassizii
ENSMZEG00005017438	ncl	100	97.863	ENSHBUG00000006869	ncl	100	97.863	Haplochromis_burtoni
ENSMZEG00005017438	ncl	60	75.000	ENSHCOG00000010234	ncl	52	76.676	Hippocampus_comes
ENSMZEG00005017438	ncl	52	70.492	ENSIPUG00000024556	ncl	81	70.820	Ictalurus_punctatus
ENSMZEG00005017438	ncl	60	77.619	ENSKMAG00000008111	ncl	53	79.459	Kryptolebias_marmoratus
ENSMZEG00005017438	ncl	60	80.238	ENSLBEG00000019073	ncl	56	81.183	Labrus_bergylta
ENSMZEG00005017438	ncl	52	42.819	ENSLBEG00000014278	-	81	43.017	Labrus_bergylta
ENSMZEG00005017438	ncl	54	43.544	ENSLBEG00000007915	-	65	43.194	Labrus_bergylta
ENSMZEG00005017438	ncl	66	60.738	ENSLACG00000009328	ncl	57	64.362	Latimeria_chalumnae
ENSMZEG00005017438	ncl	58	51.100	ENSLACG00000022167	-	79	52.547	Latimeria_chalumnae
ENSMZEG00005017438	ncl	66	62.208	ENSLOCG00000004828	ncl	51	64.879	Lepisosteus_oculatus
ENSMZEG00005017438	ncl	61	41.480	ENSMAMG00000003479	-	69	42.448	Mastacembelus_armatus
ENSMZEG00005017438	ncl	52	59.079	ENSMGAG00000008147	-	86	58.760	Meleagris_gallopavo
ENSMZEG00005017438	ncl	53	80.769	ENSMMOG00000008553	ncl	83	82.051	Mola_mola
ENSMZEG00005017438	ncl	93	73.582	ENSMALG00000014827	ncl	58	79.293	Monopterus_albus
ENSMZEG00005017438	ncl	60	98.512	ENSNBRG00000000146	-	99	98.512	Neolamprologus_brichardi
ENSMZEG00005017438	ncl	63	98.596	ENSNBRG00000001232	ncl	100	98.596	Neolamprologus_brichardi
ENSMZEG00005017438	ncl	53	38.919	ENSONIG00000010631	-	95	39.024	Oreochromis_niloticus
ENSMZEG00005017438	ncl	100	96.893	ENSONIG00000012508	ncl	100	96.893	Oreochromis_niloticus
ENSMZEG00005017438	ncl	67	59.481	ENSOANG00000008732	-	61	60.000	Ornithorhynchus_anatinus
ENSMZEG00005017438	ncl	61	38.621	ENSORLG00000004645	-	83	40.526	Oryzias_latipes
ENSMZEG00005017438	ncl	54	40.256	ENSORLG00020003497	-	74	40.526	Oryzias_latipes_hni
ENSMZEG00005017438	ncl	50	76.923	ENSORLG00015013815	ncl	86	78.526	Oryzias_latipes_hsok
ENSMZEG00005017438	ncl	57	40.441	ENSORLG00015006613	-	77	41.053	Oryzias_latipes_hsok
ENSMZEG00005017438	ncl	55	40.750	ENSOMEG00000015864	-	82	41.316	Oryzias_melastigma
ENSMZEG00005017438	ncl	60	72.340	ENSPKIG00000002604	ncl	53	73.190	Paramormyrops_kingsleyae
ENSMZEG00005017438	ncl	66	55.306	ENSPSIG00000002361	-	53	60.677	Pelodiscus_sinensis
ENSMZEG00005017438	ncl	52	56.464	ENSPCIG00000003293	-	54	55.959	Phascolarctos_cinereus
ENSMZEG00005017438	ncl	66	75.484	ENSPFOG00000024205	ncl	57	77.672	Poecilia_formosa
ENSMZEG00005017438	ncl	66	74.678	ENSPLAG00000024026	ncl	58	69.340	Poecilia_latipinna
ENSMZEG00005017438	ncl	66	75.322	ENSPMEG00000006000	ncl	58	68.941	Poecilia_mexicana
ENSMZEG00005017438	ncl	100	99.425	ENSPNYG00000020494	ncl	100	99.425	Pundamilia_nyererei
ENSMZEG00005017438	ncl	60	68.246	ENSPNAG00000006192	ncl	56	68.704	Pygocentrus_nattereri
ENSMZEG00005017438	ncl	72	68.527	ENSSFOG00015008583	ncl	58	74.531	Scleropages_formosus
ENSMZEG00005017438	ncl	55	43.875	ENSSFOG00015013153	-	75	46.205	Scleropages_formosus
ENSMZEG00005017438	ncl	60	77.778	ENSSMAG00000021241	ncl	60	77.778	Scophthalmus_maximus
ENSMZEG00005017438	ncl	56	45.500	ENSSMAG00000007582	-	61	45.910	Scophthalmus_maximus
ENSMZEG00005017438	ncl	65	40.851	ENSSDUG00000010922	-	70	44.357	Seriola_dumerili
ENSMZEG00005017438	ncl	77	75.325	ENSSDUG00000006128	ncl	85	81.452	Seriola_dumerili
ENSMZEG00005017438	ncl	64	42.824	ENSSLDG00000015784	-	90	42.790	Seriola_lalandi_dorsalis
ENSMZEG00005017438	ncl	69	78.144	ENSSLDG00000002012	ncl	53	81.183	Seriola_lalandi_dorsalis
ENSMZEG00005017438	ncl	53	60.256	ENSSPUG00000008244	-	54	60.471	Sphenodon_punctatus
ENSMZEG00005017438	ncl	56	44.717	ENSSPAG00000001859	-	61	44.681	Stegastes_partitus
ENSMZEG00005017438	ncl	52	58.511	ENSTGUG00000009782	-	61	57.592	Taeniopygia_guttata
ENSMZEG00005017438	ncl	54	74.016	ENSTNIG00000012186	ncl	64	74.300	Tetraodon_nigroviridis
ENSMZEG00005017438	ncl	53	40.318	ENSXCOG00000007369	-	89	40.053	Xiphophorus_couchianus
ENSMZEG00005017438	ncl	54	47.785	ENSXCOG00000003524	ncl	85	61.702	Xiphophorus_couchianus
ENSMZEG00005017438	ncl	53	77.568	ENSXMAG00000005914	ncl	51	77.568	Xiphophorus_maculatus