EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017654 (Gene tree)
Gene ID: 101463626
Gene Symbol: ddx39b
Alias: bat1|zgc:63773
Full Name: spliceosome RNA helicase DDX39B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 22639 bases
Position: chrLG22:29106456-29129094
Accession: 101463626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023594	ResIII	PF04851.15	3.5e-08	1	1
ENSMZEP00005023594	DEAD	PF00270.29	2.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024368	-	2827	XM_004573633	ENSMZEP00005023594	437 (aa)	XP_004573690	UPI000D327205

Gene Model

Click here to download ENSMZEG00005017654's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG
mze03015	mRNA surveillance pathway	KEGG
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017654	ddx39b	99	90.783	ENSG00000198563	DDX39B	95	95.506	Homo_sapiens
ENSMZEG00005017654	ddx39b	99	90.553	ENSAMEG00000009508	DDX39B	99	90.553	Ailuropoda_melanoleuca
ENSMZEG00005017654	ddx39b	99	95.413	ENSACIG00000004534	ddx39b	99	95.183	Amphilophus_citrinellus
ENSMZEG00005017654	ddx39b	99	94.700	ENSATEG00000012366	ddx39b	99	94.700	Anabas_testudineus
ENSMZEG00005017654	ddx39b	99	90.805	ENSACAG00000012240	DDX39B	99	90.575	Anolis_carolinensis
ENSMZEG00005017654	ddx39b	99	90.783	ENSANAG00000030372	DDX39B	99	90.783	Aotus_nancymaae
ENSMZEG00005017654	ddx39b	100	99.771	ENSACLG00000018759	ddx39b	100	99.771	Astatotilapia_calliptera
ENSMZEG00005017654	ddx39b	99	92.414	ENSAMXG00000017837	ddx39b	99	91.954	Astyanax_mexicanus
ENSMZEG00005017654	ddx39b	99	90.783	ENSBTAG00000014490	DDX39B	99	90.783	Bos_taurus
ENSMZEG00005017654	ddx39b	99	90.783	ENSCJAG00000003152	DDX39B	99	90.783	Callithrix_jacchus
ENSMZEG00005017654	ddx39b	99	90.553	ENSCAFG00000000509	DDX39B	99	93.851	Canis_familiaris
ENSMZEG00005017654	ddx39b	99	90.553	ENSCAFG00020020530	DDX39B	99	90.783	Canis_lupus_dingo
ENSMZEG00005017654	ddx39b	99	90.783	ENSCHIG00000004579	DDX39B	99	90.783	Capra_hircus
ENSMZEG00005017654	ddx39b	99	79.032	ENSTSYG00000029741	-	94	76.562	Carlito_syrichta
ENSMZEG00005017654	ddx39b	99	90.783	ENSTSYG00000010226	-	99	90.783	Carlito_syrichta
ENSMZEG00005017654	ddx39b	99	90.553	ENSCAPG00000010066	DDX39B	99	90.553	Cavia_aperea
ENSMZEG00005017654	ddx39b	99	90.553	ENSCPOG00000002335	DDX39B	99	90.553	Cavia_porcellus
ENSMZEG00005017654	ddx39b	99	90.783	ENSCCAG00000027897	DDX39B	99	90.783	Cebus_capucinus
ENSMZEG00005017654	ddx39b	99	82.176	ENSCATG00000043709	DDX39B	99	82.176	Cercocebus_atys
ENSMZEG00005017654	ddx39b	99	90.553	ENSCLAG00000014555	DDX39B	99	90.553	Chinchilla_lanigera
ENSMZEG00005017654	ddx39b	99	91.204	ENSCSAG00000008517	DDX39B	100	91.204	Chlorocebus_sabaeus
ENSMZEG00005017654	ddx39b	62	93.382	ENSCPBG00000014671	-	99	93.382	Chrysemys_picta_bellii
ENSMZEG00005017654	ddx39b	99	90.783	ENSCANG00000041217	DDX39B	99	90.783	Colobus_angolensis_palliatus
ENSMZEG00005017654	ddx39b	58	89.286	ENSCGRG00001017315	-	95	87.324	Cricetulus_griseus_chok1gshd
ENSMZEG00005017654	ddx39b	80	80.398	ENSCGRG00001021916	-	87	80.398	Cricetulus_griseus_chok1gshd
ENSMZEG00005017654	ddx39b	58	89.286	ENSCGRG00000012479	-	76	89.286	Cricetulus_griseus_crigri
ENSMZEG00005017654	ddx39b	99	92.857	ENSDARG00000036069	ddx39b	99	92.857	Danio_rerio
ENSMZEG00005017654	ddx39b	99	90.783	ENSDNOG00000010215	DDX39B	99	90.783	Dasypus_novemcinctus
ENSMZEG00005017654	ddx39b	87	91.601	ENSDORG00000004985	Ddx39b	100	91.601	Dipodomys_ordii
ENSMZEG00005017654	ddx39b	87	79.528	ENSETEG00000009649	DDX39B	87	79.265	Echinops_telfairi
ENSMZEG00005017654	ddx39b	99	90.783	ENSEASG00005017156	DDX39B	99	90.783	Equus_asinus_asinus
ENSMZEG00005017654	ddx39b	99	90.783	ENSECAG00000007750	DDX39B	99	90.783	Equus_caballus
ENSMZEG00005017654	ddx39b	99	91.055	ENSELUG00000017904	ddx39b	99	90.323	Esox_lucius
ENSMZEG00005017654	ddx39b	99	90.553	ENSFCAG00000004497	DDX39B	99	90.553	Felis_catus
ENSMZEG00005017654	ddx39b	99	90.553	ENSFDAG00000011074	DDX39B	99	90.553	Fukomys_damarensis
ENSMZEG00005017654	ddx39b	72	93.968	ENSGAGG00000001300	-	80	93.968	Gopherus_agassizii
ENSMZEG00005017654	ddx39b	99	90.783	ENSGGOG00000005989	DDX39B	99	90.783	Gorilla_gorilla
ENSMZEG00005017654	ddx39b	99	90.092	ENSHGLG00000019248	DDX39B	99	90.092	Heterocephalus_glaber_female
ENSMZEG00005017654	ddx39b	99	90.092	ENSHGLG00100011850	DDX39B	99	90.092	Heterocephalus_glaber_male
ENSMZEG00005017654	ddx39b	99	91.954	ENSIPUG00000015733	DDX39B	94	91.954	Ictalurus_punctatus
ENSMZEG00005017654	ddx39b	99	90.323	ENSSTOG00000012838	DDX39B	99	90.323	Ictidomys_tridecemlineatus
ENSMZEG00005017654	ddx39b	99	90.553	ENSJJAG00000005660	-	99	90.553	Jaculus_jaculus
ENSMZEG00005017654	ddx39b	99	80.510	ENSLBEG00000012254	ddx39b	99	80.510	Labrus_bergylta
ENSMZEG00005017654	ddx39b	64	81.495	ENSLBEG00000017177	-	81	81.495	Labrus_bergylta
ENSMZEG00005017654	ddx39b	99	82.955	ENSLACG00000002110	DDX39B	99	82.955	Latimeria_chalumnae
ENSMZEG00005017654	ddx39b	99	90.553	ENSLAFG00000014202	DDX39B	99	90.553	Loxodonta_africana
ENSMZEG00005017654	ddx39b	99	90.783	ENSMFAG00000034233	DDX39B	99	90.783	Macaca_fascicularis
ENSMZEG00005017654	ddx39b	99	90.783	ENSMMUG00000008839	DDX39B	99	90.783	Macaca_mulatta
ENSMZEG00005017654	ddx39b	99	90.783	ENSMNEG00000041059	DDX39B	99	90.783	Macaca_nemestrina
ENSMZEG00005017654	ddx39b	99	90.783	ENSMLEG00000043791	DDX39B	99	90.783	Mandrillus_leucophaeus
ENSMZEG00005017654	ddx39b	99	91.014	ENSMAUG00000008059	Ddx39b	99	91.014	Mesocricetus_auratus
ENSMZEG00005017654	ddx39b	99	90.783	ENSMICG00000017349	DDX39B	99	90.783	Microcebus_murinus
ENSMZEG00005017654	ddx39b	99	91.014	ENSMOCG00000011169	Ddx39b	99	91.014	Microtus_ochrogaster
ENSMZEG00005017654	ddx39b	88	91.645	ENSMODG00000015791	DDX39B	88	91.645	Monodelphis_domestica
ENSMZEG00005017654	ddx39b	99	90.553	ENSMUSG00000019432	Ddx39b	100	94.595	Mus_musculus
ENSMZEG00005017654	ddx39b	99	90.553	MGP_PahariEiJ_G0020513	Ddx39b	100	94.595	Mus_pahari
ENSMZEG00005017654	ddx39b	99	90.553	MGP_SPRETEiJ_G0022424	Ddx39b	99	90.553	Mus_spretus
ENSMZEG00005017654	ddx39b	99	90.553	ENSMPUG00000011407	DDX39B	99	90.553	Mustela_putorius_furo
ENSMZEG00005017654	ddx39b	71	93.871	ENSMLUG00000001681	DDX39B	99	93.871	Myotis_lucifugus
ENSMZEG00005017654	ddx39b	99	91.415	ENSNGAG00000022948	Ddx39b	99	90.783	Nannospalax_galili
ENSMZEG00005017654	ddx39b	83	93.310	ENSNLEG00000006094	DDX39B	99	93.310	Nomascus_leucogenys
ENSMZEG00005017654	ddx39b	85	94.570	ENSMEUG00000008264	DDX39B	85	94.570	Notamacropus_eugenii
ENSMZEG00005017654	ddx39b	99	90.553	ENSOPRG00000011923	DDX39B	99	90.553	Ochotona_princeps
ENSMZEG00005017654	ddx39b	99	90.553	ENSODEG00000018083	DDX39B	99	90.553	Octodon_degus
ENSMZEG00005017654	ddx39b	99	96.544	ENSONIG00000004740	ddx39b	99	96.544	Oreochromis_niloticus
ENSMZEG00005017654	ddx39b	56	87.705	ENSOANG00000008361	DDX39B	95	87.705	Ornithorhynchus_anatinus
ENSMZEG00005017654	ddx39b	99	87.305	ENSOCUG00000024126	DDX39B	99	87.305	Oryctolagus_cuniculus
ENSMZEG00005017654	ddx39b	82	86.327	ENSOGAG00000009067	-	100	93.210	Otolemur_garnettii
ENSMZEG00005017654	ddx39b	99	89.425	ENSOGAG00000028850	-	99	89.425	Otolemur_garnettii
ENSMZEG00005017654	ddx39b	99	90.783	ENSOARG00000008787	DDX39B	98	90.783	Ovis_aries
ENSMZEG00005017654	ddx39b	99	90.783	ENSPPAG00000043072	DDX39B	99	90.783	Pan_paniscus
ENSMZEG00005017654	ddx39b	99	90.553	ENSPPRG00000001913	DDX39B	99	90.553	Panthera_pardus
ENSMZEG00005017654	ddx39b	99	89.631	ENSPTIG00000017669	DDX39B	99	89.631	Panthera_tigris_altaica
ENSMZEG00005017654	ddx39b	99	90.783	ENSPTRG00000032509	DDX39B	99	90.783	Pan_troglodytes
ENSMZEG00005017654	ddx39b	99	90.783	ENSPANG00000018609	DDX39B	99	90.783	Papio_anubis
ENSMZEG00005017654	ddx39b	99	91.284	ENSPKIG00000011324	ddx39b	99	91.284	Paramormyrops_kingsleyae
ENSMZEG00005017654	ddx39b	99	90.783	ENSPEMG00000016905	Ddx39b	99	90.783	Peromyscus_maniculatus_bairdii
ENSMZEG00005017654	ddx39b	99	90.783	ENSPCIG00000017572	DDX39B	99	90.783	Phascolarctos_cinereus
ENSMZEG00005017654	ddx39b	99	90.783	ENSPPYG00000016433	DDX39B	99	90.783	Pongo_abelii
ENSMZEG00005017654	ddx39b	65	93.286	ENSPCAG00000003484	DDX39B	99	93.286	Procavia_capensis
ENSMZEG00005017654	ddx39b	99	90.783	ENSPCOG00000018656	DDX39B	99	90.783	Propithecus_coquereli
ENSMZEG00005017654	ddx39b	99	90.783	ENSPVAG00000004653	DDX39B	99	90.783	Pteropus_vampyrus
ENSMZEG00005017654	ddx39b	98	87.354	ENSPNYG00000010382	ddx39b	100	87.414	Pundamilia_nyererei
ENSMZEG00005017654	ddx39b	99	92.414	ENSPNAG00000026926	ddx39b	99	91.954	Pygocentrus_nattereri
ENSMZEG00005017654	ddx39b	99	90.553	ENSRNOG00000000841	Ddx39b	99	90.553	Rattus_norvegicus
ENSMZEG00005017654	ddx39b	99	80.876	ENSRBIG00000031309	DDX39B	99	80.876	Rhinopithecus_bieti
ENSMZEG00005017654	ddx39b	99	90.783	ENSRROG00000039517	DDX39B	99	90.783	Rhinopithecus_roxellana
ENSMZEG00005017654	ddx39b	99	80.876	ENSSBOG00000035513	-	99	80.876	Saimiri_boliviensis_boliviensis
ENSMZEG00005017654	ddx39b	99	90.783	ENSSHAG00000003209	DDX39B	99	90.783	Sarcophilus_harrisii
ENSMZEG00005017654	ddx39b	99	92.627	ENSSFOG00015016107	ddx39b	99	92.202	Scleropages_formosus
ENSMZEG00005017654	ddx39b	99	95.622	ENSSDUG00000011557	ddx39b	99	95.622	Seriola_dumerili
ENSMZEG00005017654	ddx39b	99	94.931	ENSSLDG00000015763	ddx39b	99	94.931	Seriola_lalandi_dorsalis
ENSMZEG00005017654	ddx39b	87	80.315	ENSSARG00000005245	DDX39B	100	80.315	Sorex_araneus
ENSMZEG00005017654	ddx39b	99	91.014	ENSSPUG00000012805	DDX39B	99	90.553	Sphenodon_punctatus
ENSMZEG00005017654	ddx39b	99	90.783	ENSSSCG00000001400	DDX39B	99	94.203	Sus_scrofa
ENSMZEG00005017654	ddx39b	99	68.433	ENSTBEG00000003721	DDX39B	99	68.433	Tupaia_belangeri
ENSMZEG00005017654	ddx39b	99	82.916	ENSTTRG00000014074	DDX39B	99	82.916	Tursiops_truncatus
ENSMZEG00005017654	ddx39b	99	78.670	ENSUAMG00000027335	DDX39B	99	78.670	Ursus_americanus
ENSMZEG00005017654	ddx39b	99	81.797	ENSUMAG00000015124	DDX39B	99	81.797	Ursus_maritimus
ENSMZEG00005017654	ddx39b	62	82.500	ENSVPAG00000009167	-	74	82.500	Vicugna_pacos
ENSMZEG00005017654	ddx39b	99	90.553	ENSVVUG00000019518	DDX39B	99	90.783	Vulpes_vulpes
ENSMZEG00005017654	ddx39b	99	79.727	ENSXETG00000002498	ddx39b	99	79.499	Xenopus_tropicalis