EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017669 (Gene tree)
Gene ID: 101465744
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 20627 bases
Position: chrLG22:29147851-29168477
Accession: 101465744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023628	tRNA-synt_1g	PF09334.11	2.7e-14	1	1
ENSMZEP00005023628	Anticodon_1	PF08264.13	1e-35	1	1
ENSMZEP00005023628	tRNA-synt_1	PF00133.22	2.9e-194	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024402	-	3472	XM_004573646	ENSMZEP00005023628	1073 (aa)	XP_004573703	UPI00032A13B1

Gene Model

Click here to download ENSMZEG00005017669's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017669	vars2	100	78.947	ENSAPOG00000007396	vars2	100	79.132	Acanthochromis_polyacanthus
ENSMZEG00005017669	vars2	97	51.167	ENSAMEG00000012997	VARS2	95	51.167	Ailuropoda_melanoleuca
ENSMZEG00005017669	vars2	100	85.475	ENSACIG00000004344	vars2	99	85.475	Amphilophus_citrinellus
ENSMZEG00005017669	vars2	100	79.317	ENSAOCG00000000476	vars2	100	79.501	Amphiprion_ocellaris
ENSMZEG00005017669	vars2	100	78.947	ENSAPEG00000008646	vars2	97	79.132	Amphiprion_percula
ENSMZEG00005017669	vars2	99	80.694	ENSATEG00000012291	vars2	99	80.694	Anabas_testudineus
ENSMZEG00005017669	vars2	97	52.186	ENSACAG00000022093	VARS2	95	52.186	Anolis_carolinensis
ENSMZEG00005017669	vars2	99	49.766	ENSANAG00000038018	VARS2	97	49.766	Aotus_nancymaae
ENSMZEG00005017669	vars2	100	99.907	ENSACLG00000018673	vars2	100	99.907	Astatotilapia_calliptera
ENSMZEG00005017669	vars2	97	70.977	ENSAMXG00000017773	vars2	96	72.004	Astyanax_mexicanus
ENSMZEG00005017669	vars2	99	50.559	ENSBTAG00000010698	VARS2	98	50.559	Bos_taurus
ENSMZEG00005017669	vars2	99	49.579	ENSCJAG00000019826	VARS2	97	49.673	Callithrix_jacchus
ENSMZEG00005017669	vars2	99	51.020	ENSCAFG00000000454	VARS2	98	51.020	Canis_familiaris
ENSMZEG00005017669	vars2	86	55.806	ENSCAFG00020019387	VARS2	93	55.794	Canis_lupus_dingo
ENSMZEG00005017669	vars2	99	50.511	ENSCHIG00000007847	VARS2	98	50.885	Capra_hircus
ENSMZEG00005017669	vars2	98	51.251	ENSTSYG00000009904	VARS2	99	51.251	Carlito_syrichta
ENSMZEG00005017669	vars2	89	52.406	ENSCAPG00000017770	VARS2	99	52.510	Cavia_aperea
ENSMZEG00005017669	vars2	99	51.024	ENSCPOG00000021834	VARS2	98	51.024	Cavia_porcellus
ENSMZEG00005017669	vars2	99	49.486	ENSCCAG00000037907	VARS2	97	49.579	Cebus_capucinus
ENSMZEG00005017669	vars2	98	50.047	ENSCATG00000032554	VARS2	98	50.140	Cercocebus_atys
ENSMZEG00005017669	vars2	98	51.163	ENSCLAG00000002889	VARS2	99	51.163	Chinchilla_lanigera
ENSMZEG00005017669	vars2	98	50.327	ENSCSAG00000008327	VARS2	98	50.420	Chlorocebus_sabaeus
ENSMZEG00005017669	vars2	92	55.758	ENSCPBG00000021502	VARS2	96	55.758	Chrysemys_picta_bellii
ENSMZEG00005017669	vars2	98	49.860	ENSCANG00000014991	VARS2	97	49.953	Colobus_angolensis_palliatus
ENSMZEG00005017669	vars2	99	51.165	ENSCGRG00001021535	Vars2	98	51.117	Cricetulus_griseus_chok1gshd
ENSMZEG00005017669	vars2	99	51.165	ENSCGRG00000014112	Vars2	98	51.117	Cricetulus_griseus_crigri
ENSMZEG00005017669	vars2	88	77.605	ENSCSEG00000015432	vars2	98	77.605	Cynoglossus_semilaevis
ENSMZEG00005017669	vars2	66	78.873	ENSCVAG00000017765	vars2	98	78.873	Cyprinodon_variegatus
ENSMZEG00005017669	vars2	99	70.255	ENSDARG00000056717	vars2	98	70.255	Danio_rerio
ENSMZEG00005017669	vars2	81	49.714	ENSDORG00000008516	Vars2	93	49.714	Dipodomys_ordii
ENSMZEG00005017669	vars2	99	44.693	ENSETEG00000014844	VARS2	98	44.693	Echinops_telfairi
ENSMZEG00005017669	vars2	98	50.651	ENSEASG00005019997	VARS2	95	54.631	Equus_asinus_asinus
ENSMZEG00005017669	vars2	98	50.836	ENSECAG00000018202	VARS2	99	50.929	Equus_caballus
ENSMZEG00005017669	vars2	63	57.843	ENSEEUG00000012591	-	61	57.843	Erinaceus_europaeus
ENSMZEG00005017669	vars2	99	71.205	ENSELUG00000017824	vars2	99	71.205	Esox_lucius
ENSMZEG00005017669	vars2	99	50.278	ENSFCAG00000010531	VARS2	98	50.278	Felis_catus
ENSMZEG00005017669	vars2	99	50.186	ENSFDAG00000017216	VARS2	98	50.186	Fukomys_damarensis
ENSMZEG00005017669	vars2	93	72.736	ENSFHEG00000013932	vars2	98	72.736	Fundulus_heteroclitus
ENSMZEG00005017669	vars2	91	70.889	ENSGMOG00000018960	vars2	99	70.889	Gadus_morhua
ENSMZEG00005017669	vars2	93	74.424	ENSGAFG00000004737	vars2	100	74.424	Gambusia_affinis
ENSMZEG00005017669	vars2	94	76.999	ENSGACG00000001464	vars2	100	76.999	Gasterosteus_aculeatus
ENSMZEG00005017669	vars2	93	55.255	ENSGAGG00000011652	VARS2	98	55.255	Gopherus_agassizii
ENSMZEG00005017669	vars2	96	50.524	ENSGGOG00000014587	VARS2	96	50.766	Gorilla_gorilla
ENSMZEG00005017669	vars2	99	93.920	ENSHBUG00000002448	vars2	100	93.920	Haplochromis_burtoni
ENSMZEG00005017669	vars2	99	51.072	ENSHGLG00000012886	VARS2	94	51.165	Heterocephalus_glaber_female
ENSMZEG00005017669	vars2	99	50.979	ENSHGLG00100016535	VARS2	98	51.072	Heterocephalus_glaber_male
ENSMZEG00005017669	vars2	69	75.984	ENSHCOG00000017907	vars2	97	75.984	Hippocampus_comes
ENSMZEG00005017669	vars2	95	71.540	ENSIPUG00000015573	Vars2	99	69.465	Ictalurus_punctatus
ENSMZEG00005017669	vars2	99	49.349	ENSSTOG00000009924	VARS2	98	49.442	Ictidomys_tridecemlineatus
ENSMZEG00005017669	vars2	97	51.245	ENSJJAG00000011144	Vars2	95	51.341	Jaculus_jaculus
ENSMZEG00005017669	vars2	99	76.427	ENSKMAG00000001393	vars2	99	76.427	Kryptolebias_marmoratus
ENSMZEG00005017669	vars2	99	73.063	ENSLBEG00000011949	vars2	99	73.063	Labrus_bergylta
ENSMZEG00005017669	vars2	51	81.736	ENSLBEG00000005480	-	81	81.522	Labrus_bergylta
ENSMZEG00005017669	vars2	97	50.803	ENSLACG00000001576	-	99	50.803	Latimeria_chalumnae
ENSMZEG00005017669	vars2	99	50.559	ENSLAFG00000015183	VARS2	98	50.559	Loxodonta_africana
ENSMZEG00005017669	vars2	98	50.140	ENSMFAG00000042367	VARS2	98	50.233	Macaca_fascicularis
ENSMZEG00005017669	vars2	98	50.233	ENSMMUG00000018609	VARS2	98	50.327	Macaca_mulatta
ENSMZEG00005017669	vars2	98	50.233	ENSMNEG00000043163	VARS2	98	50.327	Macaca_nemestrina
ENSMZEG00005017669	vars2	95	50.958	ENSMLEG00000041728	VARS2	93	51.054	Mandrillus_leucophaeus
ENSMZEG00005017669	vars2	97	79.364	ENSMAMG00000020339	vars2	99	78.069	Mastacembelus_armatus
ENSMZEG00005017669	vars2	99	51.407	ENSMAUG00000018946	Vars2	97	51.407	Mesocricetus_auratus
ENSMZEG00005017669	vars2	83	55.072	ENSMICG00000005365	VARS2	99	55.072	Microcebus_murinus
ENSMZEG00005017669	vars2	92	57.494	ENSMOCG00000014607	Vars2	98	57.494	Microtus_ochrogaster
ENSMZEG00005017669	vars2	95	76.863	ENSMMOG00000012122	vars2	100	74.862	Mola_mola
ENSMZEG00005017669	vars2	94	50.340	ENSMODG00000015848	VARS2	96	49.300	Monodelphis_domestica
ENSMZEG00005017669	vars2	96	77.756	ENSMALG00000009217	vars2	99	78.480	Monopterus_albus
ENSMZEG00005017669	vars2	99	50.651	MGP_CAROLIEiJ_G0021529	Vars2	97	54.059	Mus_caroli
ENSMZEG00005017669	vars2	99	50.652	ENSMUSG00000038838	Vars2	96	54.167	Mus_musculus
ENSMZEG00005017669	vars2	98	51.117	MGP_PahariEiJ_G0020523	Vars2	96	54.514	Mus_pahari
ENSMZEG00005017669	vars2	99	50.931	MGP_SPRETEiJ_G0022436	Vars2	97	53.368	Mus_spretus
ENSMZEG00005017669	vars2	98	52.101	ENSMPUG00000011643	VARS2	98	52.101	Mustela_putorius_furo
ENSMZEG00005017669	vars2	95	51.744	ENSMLUG00000002356	VARS2	91	51.744	Myotis_lucifugus
ENSMZEG00005017669	vars2	99	47.423	ENSNGAG00000020607	Vars2	97	47.423	Nannospalax_galili
ENSMZEG00005017669	vars2	67	92.857	ENSNBRG00000001624	vars2	63	92.857	Neolamprologus_brichardi
ENSMZEG00005017669	vars2	96	49.903	ENSNLEG00000005625	VARS2	94	49.569	Nomascus_leucogenys
ENSMZEG00005017669	vars2	77	57.333	ENSMEUG00000014475	VARS2	88	57.333	Notamacropus_eugenii
ENSMZEG00005017669	vars2	90	50.698	ENSOPRG00000000682	VARS2	88	50.698	Ochotona_princeps
ENSMZEG00005017669	vars2	99	50.890	ENSODEG00000017965	VARS2	97	50.984	Octodon_degus
ENSMZEG00005017669	vars2	94	71.316	ENSONIG00000004734	vars2	100	71.316	Oreochromis_niloticus
ENSMZEG00005017669	vars2	72	43.702	ENSOANG00000000398	-	91	43.702	Ornithorhynchus_anatinus
ENSMZEG00005017669	vars2	99	47.325	ENSOCUG00000021496	VARS2	63	47.878	Oryctolagus_cuniculus
ENSMZEG00005017669	vars2	99	72.468	ENSORLG00000010632	vars2	99	72.468	Oryzias_latipes
ENSMZEG00005017669	vars2	95	74.634	ENSORLG00020018584	vars2	99	72.560	Oryzias_latipes_hni
ENSMZEG00005017669	vars2	99	72.652	ENSORLG00015010408	vars2	99	72.652	Oryzias_latipes_hsok
ENSMZEG00005017669	vars2	96	74.708	ENSOMEG00000008360	vars2	99	72.627	Oryzias_melastigma
ENSMZEG00005017669	vars2	95	51.289	ENSOGAG00000006087	VARS2	93	51.289	Otolemur_garnettii
ENSMZEG00005017669	vars2	99	49.907	ENSOARG00000010844	VARS2	97	50.279	Ovis_aries
ENSMZEG00005017669	vars2	98	50.047	ENSPPAG00000041141	VARS2	98	50.047	Pan_paniscus
ENSMZEG00005017669	vars2	98	50.514	ENSPPRG00000006751	VARS2	96	50.514	Panthera_pardus
ENSMZEG00005017669	vars2	97	50.467	ENSPTIG00000017799	VARS2	96	52.338	Panthera_tigris_altaica
ENSMZEG00005017669	vars2	98	50.047	ENSPTRG00000034497	VARS2	98	50.047	Pan_troglodytes
ENSMZEG00005017669	vars2	98	50.233	ENSPANG00000018481	VARS2	97	51.509	Papio_anubis
ENSMZEG00005017669	vars2	97	69.770	ENSPKIG00000011372	vars2	97	69.253	Paramormyrops_kingsleyae
ENSMZEG00005017669	vars2	59	63.365	ENSPSIG00000006206	VARS2	92	62.946	Pelodiscus_sinensis
ENSMZEG00005017669	vars2	99	72.212	ENSPMGG00000000465	vars2	99	72.212	Periophthalmus_magnuspinnatus
ENSMZEG00005017669	vars2	99	50.699	ENSPEMG00000014691	Vars2	98	50.699	Peromyscus_maniculatus_bairdii
ENSMZEG00005017669	vars2	96	51.003	ENSPCIG00000015040	VARS2	97	50.614	Phascolarctos_cinereus
ENSMZEG00005017669	vars2	98	73.839	ENSPFOG00000017616	vars2	97	73.839	Poecilia_formosa
ENSMZEG00005017669	vars2	99	74.022	ENSPLAG00000019778	vars2	99	74.022	Poecilia_latipinna
ENSMZEG00005017669	vars2	99	73.562	ENSPMEG00000011123	vars2	99	73.562	Poecilia_mexicana
ENSMZEG00005017669	vars2	97	66.158	ENSPREG00000014998	vars2	99	66.158	Poecilia_reticulata
ENSMZEG00005017669	vars2	99	49.906	ENSPPYG00000016424	VARS2	97	50.000	Pongo_abelii
ENSMZEG00005017669	vars2	63	54.667	ENSPCAG00000006946	VARS2	78	54.667	Procavia_capensis
ENSMZEG00005017669	vars2	99	49.582	ENSPCOG00000014839	VARS2	95	49.582	Propithecus_coquereli
ENSMZEG00005017669	vars2	97	51.054	ENSPVAG00000004197	VARS2	95	51.054	Pteropus_vampyrus
ENSMZEG00005017669	vars2	87	96.496	ENSPNYG00000010314	vars2	100	96.496	Pundamilia_nyererei
ENSMZEG00005017669	vars2	99	68.618	ENSPNAG00000026793	vars2	100	68.893	Pygocentrus_nattereri
ENSMZEG00005017669	vars2	99	50.372	ENSRNOG00000000833	Vars2	98	50.372	Rattus_norvegicus
ENSMZEG00005017669	vars2	98	50.140	ENSRBIG00000032725	VARS2	98	50.233	Rhinopithecus_bieti
ENSMZEG00005017669	vars2	98	50.047	ENSRROG00000043847	VARS2	98	50.140	Rhinopithecus_roxellana
ENSMZEG00005017669	vars2	99	48.897	ENSSBOG00000033240	VARS2	95	48.897	Saimiri_boliviensis_boliviensis
ENSMZEG00005017669	vars2	99	50.279	ENSSHAG00000009307	VARS2	98	50.279	Sarcophilus_harrisii
ENSMZEG00005017669	vars2	98	68.685	ENSSFOG00015016187	vars2	98	68.067	Scleropages_formosus
ENSMZEG00005017669	vars2	100	77.726	ENSSMAG00000020842	vars2	99	77.819	Scophthalmus_maximus
ENSMZEG00005017669	vars2	100	81.106	ENSSDUG00000011598	vars2	100	81.290	Seriola_dumerili
ENSMZEG00005017669	vars2	100	78.033	ENSSLDG00000015492	vars2	100	78.309	Seriola_lalandi_dorsalis
ENSMZEG00005017669	vars2	79	59.555	ENSSPUG00000014700	VARS2	87	59.555	Sphenodon_punctatus
ENSMZEG00005017669	vars2	99	76.111	ENSSPAG00000004654	vars2	99	76.111	Stegastes_partitus
ENSMZEG00005017669	vars2	97	51.549	ENSSSCG00000001384	VARS2	97	53.273	Sus_scrofa
ENSMZEG00005017669	vars2	99	71.695	ENSTRUG00000005264	vars2	99	72.023	Takifugu_rubripes
ENSMZEG00005017669	vars2	97	71.854	ENSTNIG00000005916	vars2	97	71.132	Tetraodon_nigroviridis
ENSMZEG00005017669	vars2	91	49.528	ENSTTRG00000012243	VARS2	91	49.528	Tursiops_truncatus
ENSMZEG00005017669	vars2	99	50.929	ENSUAMG00000026124	VARS2	99	52.804	Ursus_americanus
ENSMZEG00005017669	vars2	99	51.070	ENSUMAG00000019894	VARS2	98	51.070	Ursus_maritimus
ENSMZEG00005017669	vars2	99	50.928	ENSVVUG00000010754	VARS2	93	50.928	Vulpes_vulpes
ENSMZEG00005017669	vars2	89	52.479	ENSXETG00000003036	vars2	98	52.479	Xenopus_tropicalis
ENSMZEG00005017669	vars2	97	74.929	ENSXCOG00000003455	vars2	99	74.929	Xiphophorus_couchianus
ENSMZEG00005017669	vars2	99	75.417	ENSXMAG00000013523	vars2	99	75.417	Xiphophorus_maculatus