EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017834 (Gene tree)
Gene ID: 101474235
Gene Symbol: SFSWAP
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 44575 bases
Position: chrLG7:40684621-40729195
Accession: 101474235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023839	DRY_EERY	PF09750.9	1.5e-31	1	1
ENSMZEP00005023839	Surp	PF01805.20	3e-28	1	2
ENSMZEP00005023839	Surp	PF01805.20	3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024622	SFSWAP-201	3551	XM_004538236	ENSMZEP00005023839	950 (aa)	XP_004538293	-

Gene Model

Click here to download ENSMZEG00005017834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017834	SFSWAP	99	81.322	ENSAPOG00000005784	sfswap	76	85.972	Acanthochromis_polyacanthus
ENSMZEG00005017834	SFSWAP	68	59.078	ENSAMEG00000013818	SFSWAP	73	57.815	Ailuropoda_melanoleuca
ENSMZEG00005017834	SFSWAP	99	83.526	ENSAOCG00000016469	sfswap	75	86.408	Amphiprion_ocellaris
ENSMZEG00005017834	SFSWAP	99	83.526	ENSAPEG00000004965	sfswap	76	86.685	Amphiprion_percula
ENSMZEG00005017834	SFSWAP	76	81.843	ENSATEG00000021053	sfswap	75	81.843	Anabas_testudineus
ENSMZEG00005017834	SFSWAP	64	58.716	ENSACAG00000007220	SFSWAP	72	56.732	Anolis_carolinensis
ENSMZEG00005017834	SFSWAP	96	52.420	ENSANAG00000001518	SFSWAP	72	59.301	Aotus_nancymaae
ENSMZEG00005017834	SFSWAP	100	100.000	ENSACLG00000020159	sfswap	100	100.000	Astatotilapia_calliptera
ENSMZEG00005017834	SFSWAP	70	66.760	ENSAMXG00000008657	sfswap	72	65.915	Astyanax_mexicanus
ENSMZEG00005017834	SFSWAP	82	59.397	ENSBTAG00000000439	SFSWAP	77	58.587	Bos_taurus
ENSMZEG00005017834	SFSWAP	96	52.111	ENSCJAG00000003613	SFSWAP	77	58.678	Callithrix_jacchus
ENSMZEG00005017834	SFSWAP	96	49.949	ENSCAFG00000006625	SFSWAP	71	59.596	Canis_familiaris
ENSMZEG00005017834	SFSWAP	74	50.791	ENSCAFG00020011254	SFSWAP	68	52.660	Canis_lupus_dingo
ENSMZEG00005017834	SFSWAP	82	59.684	ENSCHIG00000008838	SFSWAP	72	60.086	Capra_hircus
ENSMZEG00005017834	SFSWAP	83	66.564	ENSCAPG00000004394	SFSWAP	69	59.153	Cavia_aperea
ENSMZEG00005017834	SFSWAP	90	65.039	ENSCPOG00000005280	SFSWAP	73	58.162	Cavia_porcellus
ENSMZEG00005017834	SFSWAP	89	67.925	ENSCCAG00000037255	SFSWAP	72	59.244	Cebus_capucinus
ENSMZEG00005017834	SFSWAP	89	67.925	ENSCATG00000031094	SFSWAP	73	59.034	Cercocebus_atys
ENSMZEG00005017834	SFSWAP	60	60.317	ENSCHOG00000003578	SFSWAP	64	60.317	Choloepus_hoffmanni
ENSMZEG00005017834	SFSWAP	83	59.463	ENSCPBG00000024757	SFSWAP	70	60.169	Chrysemys_picta_bellii
ENSMZEG00005017834	SFSWAP	89	67.655	ENSCANG00000036501	SFSWAP	73	58.897	Colobus_angolensis_palliatus
ENSMZEG00005017834	SFSWAP	76	76.223	ENSCSEG00000003773	sfswap	76	76.849	Cynoglossus_semilaevis
ENSMZEG00005017834	SFSWAP	61	67.462	ENSCVAG00000001205	-	70	72.360	Cyprinodon_variegatus
ENSMZEG00005017834	SFSWAP	70	69.275	ENSDARG00000005980	sfswap	73	67.416	Danio_rerio
ENSMZEG00005017834	SFSWAP	83	53.754	ENSDNOG00000018742	SFSWAP	69	59.155	Dasypus_novemcinctus
ENSMZEG00005017834	SFSWAP	96	47.477	ENSDORG00000010352	Sfswap	72	52.436	Dipodomys_ordii
ENSMZEG00005017834	SFSWAP	51	47.009	FBgn0003638	su(w[a])	56	57.303	Drosophila_melanogaster
ENSMZEG00005017834	SFSWAP	83	33.722	ENSEBUG00000016748	SFSWAP	76	36.932	Eptatretus_burgeri
ENSMZEG00005017834	SFSWAP	96	52.637	ENSEASG00005016502	SFSWAP	74	58.611	Equus_asinus_asinus
ENSMZEG00005017834	SFSWAP	96	52.469	ENSECAG00000007657	SFSWAP	74	58.611	Equus_caballus
ENSMZEG00005017834	SFSWAP	81	51.226	ENSEEUG00000001713	SFSWAP	71	49.750	Erinaceus_europaeus
ENSMZEG00005017834	SFSWAP	70	63.462	ENSELUG00000010942	sfswap	94	63.636	Esox_lucius
ENSMZEG00005017834	SFSWAP	96	52.012	ENSFCAG00000010778	SFSWAP	73	58.832	Felis_catus
ENSMZEG00005017834	SFSWAP	67	59.424	ENSFALG00000009577	SFSWAP	70	58.345	Ficedula_albicollis
ENSMZEG00005017834	SFSWAP	98	50.449	ENSFDAG00000017235	SFSWAP	73	58.807	Fukomys_damarensis
ENSMZEG00005017834	SFSWAP	77	79.296	ENSGAFG00000006272	sfswap	81	78.919	Gambusia_affinis
ENSMZEG00005017834	SFSWAP	70	89.655	ENSGACG00000017647	sfswap	90	68.314	Gasterosteus_aculeatus
ENSMZEG00005017834	SFSWAP	83	59.605	ENSGAGG00000002611	SFSWAP	70	59.831	Gopherus_agassizii
ENSMZEG00005017834	SFSWAP	61	68.464	ENSGGOG00000014877	SFSWAP	73	59.310	Gorilla_gorilla
ENSMZEG00005017834	SFSWAP	99	96.366	ENSHBUG00000005629	sfswap	99	97.828	Haplochromis_burtoni
ENSMZEG00005017834	SFSWAP	88	66.846	ENSHGLG00000019216	SFSWAP	73	59.639	Heterocephalus_glaber_female
ENSMZEG00005017834	SFSWAP	88	67.027	ENSHGLG00100019350	SFSWAP	73	59.778	Heterocephalus_glaber_male
ENSMZEG00005017834	SFSWAP	99	68.646	ENSHCOG00000009475	sfswap	77	72.715	Hippocampus_comes
ENSMZEG00005017834	SFSWAP	69	69.899	ENSIPUG00000010598	sfswap	82	65.912	Ictalurus_punctatus
ENSMZEG00005017834	SFSWAP	85	58.414	ENSJJAG00000006609	Sfswap	74	58.921	Jaculus_jaculus
ENSMZEG00005017834	SFSWAP	76	80.880	ENSKMAG00000013168	sfswap	75	81.018	Kryptolebias_marmoratus
ENSMZEG00005017834	SFSWAP	73	80.171	ENSLBEG00000010239	sfswap	78	80.456	Labrus_bergylta
ENSMZEG00005017834	SFSWAP	67	60.292	ENSLACG00000018678	SFSWAP	69	58.712	Latimeria_chalumnae
ENSMZEG00005017834	SFSWAP	98	55.100	ENSLOCG00000006202	sfswap	76	62.701	Lepisosteus_oculatus
ENSMZEG00005017834	SFSWAP	95	52.990	ENSMFAG00000037352	SFSWAP	70	58.897	Macaca_fascicularis
ENSMZEG00005017834	SFSWAP	96	53.038	ENSMMUG00000020343	SFSWAP	73	58.897	Macaca_mulatta
ENSMZEG00005017834	SFSWAP	96	53.038	ENSMNEG00000041002	SFSWAP	73	58.897	Macaca_nemestrina
ENSMZEG00005017834	SFSWAP	89	64.595	ENSMLEG00000035728	SFSWAP	73	57.618	Mandrillus_leucophaeus
ENSMZEG00005017834	SFSWAP	98	80.467	ENSMAMG00000006631	sfswap	76	84.078	Mastacembelus_armatus
ENSMZEG00005017834	SFSWAP	83	62.187	ENSMODG00000015581	SFSWAP	68	53.617	Monodelphis_domestica
ENSMZEG00005017834	SFSWAP	75	79.834	ENSMALG00000012603	sfswap	82	79.201	Monopterus_albus
ENSMZEG00005017834	SFSWAP	88	67.209	ENSMUSG00000029439	Sfswap	84	64.423	Mus_musculus
ENSMZEG00005017834	SFSWAP	90	64.706	MGP_PahariEiJ_G0024360	Sfswap	84	65.385	Mus_pahari
ENSMZEG00005017834	SFSWAP	68	59.942	ENSMLUG00000011296	SFSWAP	77	59.167	Myotis_lucifugus
ENSMZEG00005017834	SFSWAP	94	96.425	ENSNBRG00000020857	sfswap	99	96.425	Neolamprologus_brichardi
ENSMZEG00005017834	SFSWAP	68	60.201	ENSNLEG00000008386	SFSWAP	74	60.333	Nomascus_leucogenys
ENSMZEG00005017834	SFSWAP	71	60.750	ENSOPRG00000006983	-	68	53.055	Ochotona_princeps
ENSMZEG00005017834	SFSWAP	87	86.921	ENSONIG00000003757	sfswap	99	92.542	Oreochromis_niloticus
ENSMZEG00005017834	SFSWAP	75	79.586	ENSORLG00000010983	sfswap	77	79.448	Oryzias_latipes
ENSMZEG00005017834	SFSWAP	75	79.724	ENSORLG00020010779	sfswap	77	79.586	Oryzias_latipes_hni
ENSMZEG00005017834	SFSWAP	75	80.028	ENSORLG00015023093	sfswap	77	79.890	Oryzias_latipes_hsok
ENSMZEG00005017834	SFSWAP	75	81.145	ENSOMEG00000022065	sfswap	77	81.276	Oryzias_melastigma
ENSMZEG00005017834	SFSWAP	82	59.541	ENSOARG00000014314	SFSWAP	74	58.726	Ovis_aries
ENSMZEG00005017834	SFSWAP	89	68.464	ENSPPAG00000036706	SFSWAP	76	59.310	Pan_paniscus
ENSMZEG00005017834	SFSWAP	96	49.951	ENSPPRG00000017318	SFSWAP	69	58.110	Panthera_pardus
ENSMZEG00005017834	SFSWAP	96	49.635	ENSPTIG00000004304	SFSWAP	70	63.969	Panthera_tigris_altaica
ENSMZEG00005017834	SFSWAP	89	68.464	ENSPTRG00000005640	SFSWAP	76	59.310	Pan_troglodytes
ENSMZEG00005017834	SFSWAP	89	67.560	ENSPANG00000019737	SFSWAP	73	59.034	Papio_anubis
ENSMZEG00005017834	SFSWAP	73	65.241	ENSPKIG00000008327	sfswap	76	65.884	Paramormyrops_kingsleyae
ENSMZEG00005017834	SFSWAP	63	64.103	ENSPEMG00000001237	Sfswap	74	57.280	Peromyscus_maniculatus_bairdii
ENSMZEG00005017834	SFSWAP	96	49.640	ENSPCIG00000006062	SFSWAP	68	57.775	Phascolarctos_cinereus
ENSMZEG00005017834	SFSWAP	99	74.711	ENSPFOG00000019657	sfswap	79	79.865	Poecilia_formosa
ENSMZEG00005017834	SFSWAP	77	79.865	ENSPLAG00000008513	sfswap	79	79.865	Poecilia_latipinna
ENSMZEG00005017834	SFSWAP	75	80.753	ENSPMEG00000008716	sfswap	79	79.892	Poecilia_mexicana
ENSMZEG00005017834	SFSWAP	77	79.459	ENSPREG00000006692	sfswap	79	79.487	Poecilia_reticulata
ENSMZEG00005017834	SFSWAP	89	67.560	ENSPPYG00000005129	SFSWAP	74	59.034	Pongo_abelii
ENSMZEG00005017834	SFSWAP	51	61.460	ENSPCAG00000004977	-	59	57.115	Procavia_capensis
ENSMZEG00005017834	SFSWAP	88	66.577	ENSPCOG00000023786	SFSWAP	72	58.906	Propithecus_coquereli
ENSMZEG00005017834	SFSWAP	74	65.882	ENSPVAG00000014918	SFSWAP	61	65.882	Pteropus_vampyrus
ENSMZEG00005017834	SFSWAP	99	95.683	ENSPNYG00000012660	sfswap	99	95.478	Pundamilia_nyererei
ENSMZEG00005017834	SFSWAP	70	66.385	ENSPNAG00000007073	sfswap	73	69.048	Pygocentrus_nattereri
ENSMZEG00005017834	SFSWAP	78	62.044	ENSRNOG00000000931	Sfswap	98	43.952	Rattus_norvegicus
ENSMZEG00005017834	SFSWAP	89	67.925	ENSRBIG00000036330	SFSWAP	72	58.466	Rhinopithecus_bieti
ENSMZEG00005017834	SFSWAP	96	49.755	ENSSBOG00000026217	SFSWAP	74	58.016	Saimiri_boliviensis_boliviensis
ENSMZEG00005017834	SFSWAP	91	50.159	ENSSHAG00000014232	SFSWAP	73	56.749	Sarcophilus_harrisii
ENSMZEG00005017834	SFSWAP	66	69.055	ENSSFOG00015000766	sfswap	70	68.902	Scleropages_formosus
ENSMZEG00005017834	SFSWAP	76	79.098	ENSSMAG00000018718	sfswap	76	79.235	Scophthalmus_maximus
ENSMZEG00005017834	SFSWAP	76	84.848	ENSSDUG00000021680	sfswap	74	84.848	Seriola_dumerili
ENSMZEG00005017834	SFSWAP	76	84.573	ENSSLDG00000010835	sfswap	74	84.573	Seriola_lalandi_dorsalis
ENSMZEG00005017834	SFSWAP	64	59.119	ENSSARG00000000424	SFSWAP	74	59.366	Sorex_araneus
ENSMZEG00005017834	SFSWAP	72	53.731	ENSSPUG00000010272	SFSWAP	70	56.529	Sphenodon_punctatus
ENSMZEG00005017834	SFSWAP	75	85.000	ENSSPAG00000014310	sfswap	98	79.498	Stegastes_partitus
ENSMZEG00005017834	SFSWAP	83	61.151	ENSSSCG00000009744	SFSWAP	72	60.776	Sus_scrofa
ENSMZEG00005017834	SFSWAP	68	61.484	ENSTGUG00000004623	SFSWAP	73	61.245	Taeniopygia_guttata
ENSMZEG00005017834	SFSWAP	58	66.486	ENSTTRG00000013478	SFSWAP	73	54.558	Tursiops_truncatus
ENSMZEG00005017834	SFSWAP	54	66.220	ENSUAMG00000016807	SFSWAP	73	57.836	Ursus_americanus
ENSMZEG00005017834	SFSWAP	68	58.153	ENSUMAG00000002957	SFSWAP	75	56.328	Ursus_maritimus
ENSMZEG00005017834	SFSWAP	84	58.069	ENSVVUG00000010753	SFSWAP	71	59.596	Vulpes_vulpes
ENSMZEG00005017834	SFSWAP	67	56.604	ENSXETG00000009350	sfswap	88	58.129	Xenopus_tropicalis
ENSMZEG00005017834	SFSWAP	76	80.636	ENSXMAG00000009020	sfswap	79	80.135	Xiphophorus_maculatus