EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017838 (Gene tree)
Gene ID: 101484308
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 9657 bases
Position: chrLG17:11796838-11806494
Accession: 101484308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023843	PRP38	PF03371.15	3.7e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024626	-	2534	XM_004569339	ENSMZEP00005023843	309 (aa)	XP_004569396	UPI0003296E3D

Gene Model

Click here to download ENSMZEG00005017838's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017838	prpf38a	100	80.192	ENSG00000134748	PRPF38A	71	86.425	Homo_sapiens
ENSMZEG00005017838	prpf38a	100	97.087	ENSAPOG00000011652	prpf38a	100	97.087	Acanthochromis_polyacanthus
ENSMZEG00005017838	prpf38a	100	80.192	ENSAMEG00000009319	PRPF38A	71	86.425	Ailuropoda_melanoleuca
ENSMZEG00005017838	prpf38a	100	93.528	ENSACIG00000012292	prpf38a	72	93.665	Amphilophus_citrinellus
ENSMZEG00005017838	prpf38a	100	97.087	ENSAOCG00000018004	prpf38a	100	97.087	Amphiprion_ocellaris
ENSMZEG00005017838	prpf38a	100	97.087	ENSAPEG00000021414	prpf38a	100	97.087	Amphiprion_percula
ENSMZEG00005017838	prpf38a	72	93.665	ENSATEG00000004608	prpf38a	72	93.665	Anabas_testudineus
ENSMZEG00005017838	prpf38a	79	77.016	ENSAPLG00000005827	PRPF38A	63	83.974	Anas_platyrhynchos
ENSMZEG00005017838	prpf38a	100	80.831	ENSACAG00000008249	PRPF38A	71	87.330	Anolis_carolinensis
ENSMZEG00005017838	prpf38a	100	56.230	ENSANAG00000029204	-	70	55.111	Aotus_nancymaae
ENSMZEG00005017838	prpf38a	100	80.192	ENSANAG00000027839	PRPF38A	71	86.425	Aotus_nancymaae
ENSMZEG00005017838	prpf38a	100	100.000	ENSACLG00000021595	prpf38a	100	100.000	Astatotilapia_calliptera
ENSMZEG00005017838	prpf38a	100	84.345	ENSAMXG00000029274	prpf38a	71	93.665	Astyanax_mexicanus
ENSMZEG00005017838	prpf38a	100	80.192	ENSBTAG00000002720	PRPF38A	75	86.425	Bos_taurus
ENSMZEG00005017838	prpf38a	63	63.077	WBGene00008380	prp-38	59	64.894	Caenorhabditis_elegans
ENSMZEG00005017838	prpf38a	100	80.192	ENSCJAG00000021594	PRPF38A	74	86.425	Callithrix_jacchus
ENSMZEG00005017838	prpf38a	100	80.192	ENSCAFG00000003740	PRPF38A	71	86.425	Canis_familiaris
ENSMZEG00005017838	prpf38a	100	80.192	ENSCAFG00020010939	PRPF38A	71	86.425	Canis_lupus_dingo
ENSMZEG00005017838	prpf38a	100	80.192	ENSCHIG00000024730	PRPF38A	71	86.425	Capra_hircus
ENSMZEG00005017838	prpf38a	86	76.296	ENSTSYG00000031994	-	63	82.584	Carlito_syrichta
ENSMZEG00005017838	prpf38a	100	80.192	ENSTSYG00000009868	-	71	86.425	Carlito_syrichta
ENSMZEG00005017838	prpf38a	100	81.672	ENSCPOG00000005079	PRPF38A	71	86.425	Cavia_porcellus
ENSMZEG00005017838	prpf38a	100	77.885	ENSCCAG00000026502	PRPF38A	71	86.425	Cebus_capucinus
ENSMZEG00005017838	prpf38a	93	53.287	ENSCATG00000044190	-	57	55.319	Cercocebus_atys
ENSMZEG00005017838	prpf38a	100	80.192	ENSCATG00000032296	PRPF38A	71	86.425	Cercocebus_atys
ENSMZEG00005017838	prpf38a	100	80.192	ENSCLAG00000005816	PRPF38A	71	86.425	Chinchilla_lanigera
ENSMZEG00005017838	prpf38a	100	80.511	ENSCPBG00000014791	PRPF38A	71	86.878	Chrysemys_picta_bellii
ENSMZEG00005017838	prpf38a	75	69.658	ENSCSAVG00000009580	-	71	71.889	Ciona_savignyi
ENSMZEG00005017838	prpf38a	75	85.714	ENSCANG00000032608	PRPF38A	74	86.425	Colobus_angolensis_palliatus
ENSMZEG00005017838	prpf38a	100	80.192	ENSCGRG00001018502	-	71	86.425	Cricetulus_griseus_chok1gshd
ENSMZEG00005017838	prpf38a	84	69.732	ENSCGRG00001002557	-	74	72.851	Cricetulus_griseus_chok1gshd
ENSMZEG00005017838	prpf38a	100	80.192	ENSCGRG00000014868	Prpf38a	71	86.425	Cricetulus_griseus_crigri
ENSMZEG00005017838	prpf38a	72	93.694	ENSCSEG00000001269	prpf38a	76	93.694	Cynoglossus_semilaevis
ENSMZEG00005017838	prpf38a	72	94.118	ENSCVAG00000012305	prpf38a	72	94.118	Cyprinodon_variegatus
ENSMZEG00005017838	prpf38a	100	83.387	ENSDARG00000039213	prpf38a	71	91.855	Danio_rerio
ENSMZEG00005017838	prpf38a	100	80.192	ENSDNOG00000042326	PRPF38A	72	86.425	Dasypus_novemcinctus
ENSMZEG00005017838	prpf38a	84	72.624	ENSDORG00000023691	-	75	78.899	Dipodomys_ordii
ENSMZEG00005017838	prpf38a	85	95.833	ENSDORG00000023857	-	64	95.833	Dipodomys_ordii
ENSMZEG00005017838	prpf38a	84	72.624	ENSDORG00000025371	-	75	78.899	Dipodomys_ordii
ENSMZEG00005017838	prpf38a	77	79.498	ENSEBUG00000012588	prpf38a	71	79.372	Eptatretus_burgeri
ENSMZEG00005017838	prpf38a	100	80.192	ENSEASG00005014427	PRPF38A	71	86.425	Equus_asinus_asinus
ENSMZEG00005017838	prpf38a	100	80.192	ENSECAG00000022628	PRPF38A	71	86.425	Equus_caballus
ENSMZEG00005017838	prpf38a	100	94.822	ENSELUG00000021094	prpf38a	100	94.822	Esox_lucius
ENSMZEG00005017838	prpf38a	100	80.192	ENSFCAG00000002518	PRPF38A	71	86.425	Felis_catus
ENSMZEG00005017838	prpf38a	99	75.484	ENSFALG00000003612	-	73	83.028	Ficedula_albicollis
ENSMZEG00005017838	prpf38a	87	78.676	ENSFALG00000005598	-	66	85.556	Ficedula_albicollis
ENSMZEG00005017838	prpf38a	100	81.350	ENSFDAG00000011287	PRPF38A	72	86.425	Fukomys_damarensis
ENSMZEG00005017838	prpf38a	90	82.437	ENSFHEG00000014317	prpf38a	75	93.665	Fundulus_heteroclitus
ENSMZEG00005017838	prpf38a	54	96.988	ENSGMOG00000011384	prpf38a	54	96.988	Gadus_morhua
ENSMZEG00005017838	prpf38a	100	81.150	ENSGALG00000010627	PRPF38A	71	87.783	Gallus_gallus
ENSMZEG00005017838	prpf38a	72	94.118	ENSGAFG00000012422	prpf38a	72	94.118	Gambusia_affinis
ENSMZEG00005017838	prpf38a	54	92.353	ENSGACG00000000182	-	100	92.353	Gasterosteus_aculeatus
ENSMZEG00005017838	prpf38a	72	93.722	ENSGACG00000005423	prpf38a	100	94.534	Gasterosteus_aculeatus
ENSMZEG00005017838	prpf38a	100	80.511	ENSGAGG00000020547	PRPF38A	71	86.878	Gopherus_agassizii
ENSMZEG00005017838	prpf38a	100	80.192	ENSGGOG00000003940	PRPF38A	71	86.425	Gorilla_gorilla
ENSMZEG00005017838	prpf38a	66	99.510	ENSHBUG00000020572	prpf38a	87	99.510	Haplochromis_burtoni
ENSMZEG00005017838	prpf38a	100	80.192	ENSHGLG00000000475	PRPF38A	71	86.425	Heterocephalus_glaber_female
ENSMZEG00005017838	prpf38a	100	72.669	ENSHGLG00000007918	-	71	74.208	Heterocephalus_glaber_female
ENSMZEG00005017838	prpf38a	100	72.669	ENSHGLG00100003928	-	71	74.208	Heterocephalus_glaber_male
ENSMZEG00005017838	prpf38a	100	80.192	ENSHGLG00100008935	PRPF38A	71	86.425	Heterocephalus_glaber_male
ENSMZEG00005017838	prpf38a	59	93.956	ENSHCOG00000020781	prpf38a	59	94.149	Hippocampus_comes
ENSMZEG00005017838	prpf38a	90	78.445	ENSIPUG00000005757	prpf38a	71	90.090	Ictalurus_punctatus
ENSMZEG00005017838	prpf38a	100	80.192	ENSSTOG00000015610	PRPF38A	71	86.425	Ictidomys_tridecemlineatus
ENSMZEG00005017838	prpf38a	100	79.872	ENSJJAG00000015811	Prpf38a	71	85.973	Jaculus_jaculus
ENSMZEG00005017838	prpf38a	72	94.118	ENSKMAG00000006588	prpf38a	72	94.118	Kryptolebias_marmoratus
ENSMZEG00005017838	prpf38a	100	94.498	ENSLBEG00000020585	prpf38a	100	94.498	Labrus_bergylta
ENSMZEG00005017838	prpf38a	100	81.470	ENSLACG00000011495	PRPF38A	71	87.330	Latimeria_chalumnae
ENSMZEG00005017838	prpf38a	100	90.968	ENSLOCG00000006262	prpf38a	72	88.739	Lepisosteus_oculatus
ENSMZEG00005017838	prpf38a	100	80.192	ENSLAFG00000025862	PRPF38A	71	86.425	Loxodonta_africana
ENSMZEG00005017838	prpf38a	100	80.192	ENSMFAG00000039449	PRPF38A	74	86.425	Macaca_fascicularis
ENSMZEG00005017838	prpf38a	87	77.206	ENSMMUG00000014333	PRPF38A	65	82.873	Macaca_mulatta
ENSMZEG00005017838	prpf38a	93	52.595	ENSMNEG00000040242	-	65	57.005	Macaca_nemestrina
ENSMZEG00005017838	prpf38a	100	80.192	ENSMNEG00000031221	PRPF38A	71	86.425	Macaca_nemestrina
ENSMZEG00005017838	prpf38a	100	80.192	ENSMLEG00000041105	PRPF38A	71	86.425	Mandrillus_leucophaeus
ENSMZEG00005017838	prpf38a	100	97.087	ENSMAMG00000015431	prpf38a	100	97.087	Mastacembelus_armatus
ENSMZEG00005017838	prpf38a	75	87.013	ENSMGAG00000011176	PRPF38A	74	87.783	Meleagris_gallopavo
ENSMZEG00005017838	prpf38a	85	81.061	ENSMAUG00000018029	-	84	81.900	Mesocricetus_auratus
ENSMZEG00005017838	prpf38a	100	80.192	ENSMICG00000014193	PRPF38A	71	86.425	Microcebus_murinus
ENSMZEG00005017838	prpf38a	100	80.192	ENSMOCG00000013080	Prpf38a	71	86.425	Microtus_ochrogaster
ENSMZEG00005017838	prpf38a	100	88.424	ENSMMOG00000016972	prpf38a	78	94.570	Mola_mola
ENSMZEG00005017838	prpf38a	100	78.662	ENSMODG00000000644	PRPF38A	71	84.234	Monodelphis_domestica
ENSMZEG00005017838	prpf38a	100	96.440	ENSMALG00000019363	prpf38a	97	96.440	Monopterus_albus
ENSMZEG00005017838	prpf38a	100	79.872	MGP_CAROLIEiJ_G0026269	Prpf38a	71	85.973	Mus_caroli
ENSMZEG00005017838	prpf38a	100	79.872	ENSMUSG00000063800	Prpf38a	71	85.973	Mus_musculus
ENSMZEG00005017838	prpf38a	100	79.872	MGP_PahariEiJ_G0028602	Prpf38a	71	85.973	Mus_pahari
ENSMZEG00005017838	prpf38a	100	79.553	MGP_SPRETEiJ_G0027238	Prpf38a	93	90.426	Mus_spretus
ENSMZEG00005017838	prpf38a	100	80.192	ENSMPUG00000006896	PRPF38A	71	86.425	Mustela_putorius_furo
ENSMZEG00005017838	prpf38a	100	81.994	ENSNGAG00000011884	Prpf38a	72	86.425	Nannospalax_galili
ENSMZEG00005017838	prpf38a	100	97.735	ENSNBRG00000004013	prpf38a	98	97.735	Neolamprologus_brichardi
ENSMZEG00005017838	prpf38a	93	78.966	ENSNLEG00000017999	PRPF38A	63	85.354	Nomascus_leucogenys
ENSMZEG00005017838	prpf38a	97	61.513	ENSNLEG00000012592	-	67	57.014	Nomascus_leucogenys
ENSMZEG00005017838	prpf38a	93	54.983	ENSNLEG00000033398	-	60	50.228	Nomascus_leucogenys
ENSMZEG00005017838	prpf38a	100	77.636	ENSMEUG00000003860	PRPF38A	71	82.805	Notamacropus_eugenii
ENSMZEG00005017838	prpf38a	74	85.965	ENSOPRG00000008985	PRPF38A	92	86.425	Ochotona_princeps
ENSMZEG00005017838	prpf38a	100	80.192	ENSODEG00000005869	PRPF38A	71	86.425	Octodon_degus
ENSMZEG00005017838	prpf38a	100	99.029	ENSONIG00000007816	prpf38a	100	99.029	Oreochromis_niloticus
ENSMZEG00005017838	prpf38a	75	44.206	ENSOANG00000009541	-	71	42.857	Ornithorhynchus_anatinus
ENSMZEG00005017838	prpf38a	100	80.192	ENSOCUG00000000963	PRPF38A	71	86.425	Oryctolagus_cuniculus
ENSMZEG00005017838	prpf38a	99	93.831	ENSORLG00000013485	prpf38a	79	92.760	Oryzias_latipes
ENSMZEG00005017838	prpf38a	99	93.831	ENSORLG00020002130	prpf38a	79	92.760	Oryzias_latipes_hni
ENSMZEG00005017838	prpf38a	99	93.506	ENSORLG00015021393	prpf38a	75	92.308	Oryzias_latipes_hsok
ENSMZEG00005017838	prpf38a	100	93.851	ENSOMEG00000016333	prpf38a	72	93.213	Oryzias_melastigma
ENSMZEG00005017838	prpf38a	100	80.192	ENSOGAG00000005423	PRPF38A	71	86.425	Otolemur_garnettii
ENSMZEG00005017838	prpf38a	100	80.192	ENSOARG00000005373	PRPF38A	71	86.425	Ovis_aries
ENSMZEG00005017838	prpf38a	100	80.192	ENSPPAG00000030905	PRPF38A	71	86.425	Pan_paniscus
ENSMZEG00005017838	prpf38a	93	66.667	ENSPPAG00000033867	-	68	67.421	Pan_paniscus
ENSMZEG00005017838	prpf38a	100	80.192	ENSPPRG00000013268	PRPF38A	71	86.425	Panthera_pardus
ENSMZEG00005017838	prpf38a	100	80.192	ENSPTIG00000015419	PRPF38A	71	86.425	Panthera_tigris_altaica
ENSMZEG00005017838	prpf38a	100	80.192	ENSPTRG00000000739	PRPF38A	74	86.425	Pan_troglodytes
ENSMZEG00005017838	prpf38a	100	80.192	ENSPANG00000015483	PRPF38A	71	86.425	Papio_anubis
ENSMZEG00005017838	prpf38a	100	93.204	ENSPKIG00000011439	prpf38a	72	92.308	Paramormyrops_kingsleyae
ENSMZEG00005017838	prpf38a	100	80.831	ENSPSIG00000017487	PRPF38A	71	87.330	Pelodiscus_sinensis
ENSMZEG00005017838	prpf38a	100	78.413	ENSPEMG00000011212	-	70	79.372	Peromyscus_maniculatus_bairdii
ENSMZEG00005017838	prpf38a	100	80.192	ENSPEMG00000023277	-	71	86.425	Peromyscus_maniculatus_bairdii
ENSMZEG00005017838	prpf38a	100	78.344	ENSPCIG00000022369	-	71	83.784	Phascolarctos_cinereus
ENSMZEG00005017838	prpf38a	100	86.218	ENSPFOG00000004248	prpf38a	72	94.118	Poecilia_formosa
ENSMZEG00005017838	prpf38a	92	80.623	ENSPLAG00000010328	prpf38a	72	94.118	Poecilia_latipinna
ENSMZEG00005017838	prpf38a	92	80.623	ENSPMEG00000011804	prpf38a	72	94.118	Poecilia_mexicana
ENSMZEG00005017838	prpf38a	94	79.195	ENSPREG00000002835	prpf38a	58	96.277	Poecilia_reticulata
ENSMZEG00005017838	prpf38a	100	72.327	ENSPPYG00000001348	PRPF38A	71	75.221	Pongo_abelii
ENSMZEG00005017838	prpf38a	100	80.511	ENSPCAG00000013328	PRPF38A	71	86.878	Procavia_capensis
ENSMZEG00005017838	prpf38a	100	65.696	ENSPCOG00000020709	-	73	72.851	Propithecus_coquereli
ENSMZEG00005017838	prpf38a	100	80.192	ENSPCOG00000016387	-	71	86.425	Propithecus_coquereli
ENSMZEG00005017838	prpf38a	100	80.192	ENSPVAG00000009803	PRPF38A	71	86.425	Pteropus_vampyrus
ENSMZEG00005017838	prpf38a	100	100.000	ENSPNYG00000005571	prpf38a	100	100.000	Pundamilia_nyererei
ENSMZEG00005017838	prpf38a	100	84.026	ENSPNAG00000010399	prpf38a	71	93.213	Pygocentrus_nattereri
ENSMZEG00005017838	prpf38a	100	80.511	ENSRNOG00000009451	Prpf38a	71	86.878	Rattus_norvegicus
ENSMZEG00005017838	prpf38a	100	80.192	ENSRBIG00000036442	PRPF38A	74	86.425	Rhinopithecus_bieti
ENSMZEG00005017838	prpf38a	100	80.192	ENSRROG00000032788	PRPF38A	71	86.425	Rhinopithecus_roxellana
ENSMZEG00005017838	prpf38a	98	68.852	ENSRROG00000040003	-	72	70.136	Rhinopithecus_roxellana
ENSMZEG00005017838	prpf38a	100	80.192	ENSSBOG00000019515	PRPF38A	71	86.425	Saimiri_boliviensis_boliviensis
ENSMZEG00005017838	prpf38a	96	65.552	ENSSHAG00000006029	-	74	75.566	Sarcophilus_harrisii
ENSMZEG00005017838	prpf38a	86	75.368	ENSSHAG00000006906	-	66	80.556	Sarcophilus_harrisii
ENSMZEG00005017838	prpf38a	100	92.581	ENSSFOG00015013572	prpf38a	72	89.189	Scleropages_formosus
ENSMZEG00005017838	prpf38a	72	94.570	ENSSMAG00000015379	prpf38a	72	94.570	Scophthalmus_maximus
ENSMZEG00005017838	prpf38a	100	96.440	ENSSDUG00000001324	prpf38a	100	96.440	Seriola_dumerili
ENSMZEG00005017838	prpf38a	100	96.440	ENSSLDG00000014803	prpf38a	100	96.440	Seriola_lalandi_dorsalis
ENSMZEG00005017838	prpf38a	100	63.898	ENSSARG00000014458	PRPF38A	71	63.348	Sorex_araneus
ENSMZEG00005017838	prpf38a	100	82.109	ENSSPUG00000013259	PRPF38A	71	89.140	Sphenodon_punctatus
ENSMZEG00005017838	prpf38a	83	72.656	ENSSPAG00000010449	prpf38a	68	77.376	Stegastes_partitus
ENSMZEG00005017838	prpf38a	100	80.192	ENSSSCG00000028288	PRPF38A	71	86.425	Sus_scrofa
ENSMZEG00005017838	prpf38a	100	77.636	ENSTGUG00000008995	PRPF38A	71	82.805	Taeniopygia_guttata
ENSMZEG00005017838	prpf38a	72	93.213	ENSTRUG00000003374	prpf38a	68	93.213	Takifugu_rubripes
ENSMZEG00005017838	prpf38a	100	93.569	ENSTNIG00000005533	prpf38a	100	93.569	Tetraodon_nigroviridis
ENSMZEG00005017838	prpf38a	100	79.553	ENSTBEG00000000725	PRPF38A	71	86.425	Tupaia_belangeri
ENSMZEG00005017838	prpf38a	100	80.192	ENSTTRG00000016139	PRPF38A	71	86.425	Tursiops_truncatus
ENSMZEG00005017838	prpf38a	100	80.192	ENSUAMG00000000625	PRPF38A	71	86.425	Ursus_americanus
ENSMZEG00005017838	prpf38a	100	80.192	ENSUMAG00000022674	PRPF38A	71	86.425	Ursus_maritimus
ENSMZEG00005017838	prpf38a	75	85.281	ENSVPAG00000000907	PRPF38A	71	85.973	Vicugna_pacos
ENSMZEG00005017838	prpf38a	100	80.192	ENSVVUG00000004475	PRPF38A	71	86.425	Vulpes_vulpes
ENSMZEG00005017838	prpf38a	100	80.573	ENSXETG00000008060	prpf38a	71	86.425	Xenopus_tropicalis
ENSMZEG00005017838	prpf38a	72	91.928	ENSXCOG00000007393	prpf38a	74	91.928	Xiphophorus_couchianus
ENSMZEG00005017838	prpf38a	72	94.118	ENSXMAG00000026143	prpf38a	72	94.118	Xiphophorus_maculatus