EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017865 (Gene tree)
Gene ID: 101478423
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 6273 bases
Position: chrLG15:31317750-31324022
Accession: 101478423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023877	MMR_HSR1	PF01926.23	5.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024661	-	1923	XM_004561952	ENSMZEP00005023877	640 (aa)	XP_004562009	-

Gene Model

Click here to download ENSMZEG00005017865's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017865	lsg1	99	63.881	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSMZEG00005017865	lsg1	100	81.607	ENSAPOG00000009694	lsg1	100	81.988	Acanthochromis_polyacanthus
ENSMZEG00005017865	lsg1	100	63.363	ENSAMEG00000009343	LSG1	100	63.174	Ailuropoda_melanoleuca
ENSMZEG00005017865	lsg1	98	90.779	ENSACIG00000012406	lsg1	100	90.654	Amphilophus_citrinellus
ENSMZEG00005017865	lsg1	100	81.481	ENSAOCG00000016066	lsg1	100	82.298	Amphiprion_ocellaris
ENSMZEG00005017865	lsg1	100	81.327	ENSAPEG00000003252	lsg1	100	82.143	Amphiprion_percula
ENSMZEG00005017865	lsg1	98	83.758	ENSATEG00000011794	lsg1	100	83.619	Anabas_testudineus
ENSMZEG00005017865	lsg1	95	61.526	ENSACAG00000004222	LSG1	100	61.356	Anolis_carolinensis
ENSMZEG00005017865	lsg1	99	65.198	ENSANAG00000021153	LSG1	99	64.307	Aotus_nancymaae
ENSMZEG00005017865	lsg1	100	98.457	ENSACLG00000000520	lsg1	100	98.457	Astatotilapia_calliptera
ENSMZEG00005017865	lsg1	100	73.570	ENSAMXG00000008271	lsg1	100	74.383	Astyanax_mexicanus
ENSMZEG00005017865	lsg1	99	64.350	ENSBTAG00000008461	LSG1	99	64.502	Bos_taurus
ENSMZEG00005017865	lsg1	80	43.893	WBGene00016907	C53H9.2	94	51.852	Caenorhabditis_elegans
ENSMZEG00005017865	lsg1	99	65.198	ENSCJAG00000013962	LSG1	99	64.103	Callithrix_jacchus
ENSMZEG00005017865	lsg1	95	64.331	ENSCAFG00000013445	LSG1	100	64.388	Canis_familiaris
ENSMZEG00005017865	lsg1	100	63.746	ENSCAFG00020002216	LSG1	100	63.650	Canis_lupus_dingo
ENSMZEG00005017865	lsg1	100	64.688	ENSCHIG00000015769	LSG1	100	64.536	Capra_hircus
ENSMZEG00005017865	lsg1	99	64.036	ENSTSYG00000001447	LSG1	99	64.006	Carlito_syrichta
ENSMZEG00005017865	lsg1	95	65.517	ENSCAPG00000009856	LSG1	99	65.846	Cavia_aperea
ENSMZEG00005017865	lsg1	99	64.992	ENSCCAG00000035744	LSG1	99	63.746	Cebus_capucinus
ENSMZEG00005017865	lsg1	99	63.731	ENSCATG00000042060	LSG1	99	62.443	Cercocebus_atys
ENSMZEG00005017865	lsg1	99	63.582	ENSCSAG00000008796	LSG1	92	63.499	Chlorocebus_sabaeus
ENSMZEG00005017865	lsg1	100	66.567	ENSCPBG00000015941	LSG1	83	65.782	Chrysemys_picta_bellii
ENSMZEG00005017865	lsg1	78	53.012	ENSCING00000007079	-	94	59.184	Ciona_intestinalis
ENSMZEG00005017865	lsg1	78	54.217	ENSCSAVG00000002514	-	97	54.217	Ciona_savignyi
ENSMZEG00005017865	lsg1	99	64.134	ENSCANG00000030709	LSG1	99	63.636	Colobus_angolensis_palliatus
ENSMZEG00005017865	lsg1	99	64.506	ENSCGRG00001019846	Lsg1	99	65.123	Cricetulus_griseus_chok1gshd
ENSMZEG00005017865	lsg1	99	64.055	ENSCGRG00000014617	Lsg1	99	64.340	Cricetulus_griseus_crigri
ENSMZEG00005017865	lsg1	98	78.019	ENSCSEG00000008522	lsg1	100	77.845	Cynoglossus_semilaevis
ENSMZEG00005017865	lsg1	98	81.600	ENSCVAG00000002484	lsg1	100	81.435	Cyprinodon_variegatus
ENSMZEG00005017865	lsg1	100	75.580	ENSDARG00000015352	lsg1	100	75.734	Danio_rerio
ENSMZEG00005017865	lsg1	99	63.952	ENSDNOG00000006224	LSG1	99	63.499	Dasypus_novemcinctus
ENSMZEG00005017865	lsg1	99	49.383	FBgn0266284	Ns3	99	49.383	Drosophila_melanogaster
ENSMZEG00005017865	lsg1	88	74.667	ENSETEG00000003888	LSG1	89	74.667	Echinops_telfairi
ENSMZEG00005017865	lsg1	88	55.724	ENSEBUG00000003119	lsg1	85	55.387	Eptatretus_burgeri
ENSMZEG00005017865	lsg1	99	63.150	ENSEASG00005000678	LSG1	99	63.582	Equus_asinus_asinus
ENSMZEG00005017865	lsg1	99	63.150	ENSECAG00000017659	LSG1	99	63.677	Equus_caballus
ENSMZEG00005017865	lsg1	87	58.974	ENSEEUG00000015217	LSG1	87	58.974	Erinaceus_europaeus
ENSMZEG00005017865	lsg1	100	72.366	ENSELUG00000023973	lsg1	100	72.366	Esox_lucius
ENSMZEG00005017865	lsg1	100	64.018	ENSFCAG00000024957	LSG1	100	64.168	Felis_catus
ENSMZEG00005017865	lsg1	99	60.061	ENSFALG00000007210	LSG1	99	60.030	Ficedula_albicollis
ENSMZEG00005017865	lsg1	99	62.997	ENSFDAG00000017373	LSG1	99	64.985	Fukomys_damarensis
ENSMZEG00005017865	lsg1	98	81.804	ENSFHEG00000003680	lsg1	100	81.972	Fundulus_heteroclitus
ENSMZEG00005017865	lsg1	98	70.142	ENSGMOG00000015834	lsg1	91	79.121	Gadus_morhua
ENSMZEG00005017865	lsg1	99	60.542	ENSGALG00000007058	LSG1	87	60.837	Gallus_gallus
ENSMZEG00005017865	lsg1	98	82.268	ENSGAFG00000015831	lsg1	100	82.399	Gambusia_affinis
ENSMZEG00005017865	lsg1	98	81.073	ENSGACG00000009323	lsg1	100	80.989	Gasterosteus_aculeatus
ENSMZEG00005017865	lsg1	99	63.881	ENSGGOG00000000520	LSG1	99	63.473	Gorilla_gorilla
ENSMZEG00005017865	lsg1	100	99.688	ENSHBUG00000005659	lsg1	100	99.688	Haplochromis_burtoni
ENSMZEG00005017865	lsg1	99	62.519	ENSHGLG00000017390	LSG1	99	62.691	Heterocephalus_glaber_female
ENSMZEG00005017865	lsg1	99	62.519	ENSHGLG00100018587	LSG1	99	62.691	Heterocephalus_glaber_male
ENSMZEG00005017865	lsg1	98	79.147	ENSHCOG00000016848	lsg1	100	79.045	Hippocampus_comes
ENSMZEG00005017865	lsg1	100	74.109	ENSIPUG00000008631	lsg1	100	74.419	Ictalurus_punctatus
ENSMZEG00005017865	lsg1	75	58.847	ENSSTOG00000010234	LSG1	92	60.000	Ictidomys_tridecemlineatus
ENSMZEG00005017865	lsg1	99	65.432	ENSJJAG00000015513	Lsg1	99	65.741	Jaculus_jaculus
ENSMZEG00005017865	lsg1	98	77.460	ENSKMAG00000009681	lsg1	100	77.760	Kryptolebias_marmoratus
ENSMZEG00005017865	lsg1	98	79.173	ENSLBEG00000024261	lsg1	100	79.439	Labrus_bergylta
ENSMZEG00005017865	lsg1	100	66.265	ENSLACG00000013399	LSG1	100	66.265	Latimeria_chalumnae
ENSMZEG00005017865	lsg1	98	72.214	ENSLOCG00000004918	lsg1	100	72.672	Lepisosteus_oculatus
ENSMZEG00005017865	lsg1	99	64.048	ENSLAFG00000012919	-	99	64.438	Loxodonta_africana
ENSMZEG00005017865	lsg1	99	63.582	ENSMFAG00000039903	LSG1	99	62.576	Macaca_fascicularis
ENSMZEG00005017865	lsg1	99	63.582	ENSMMUG00000010708	LSG1	99	63.788	Macaca_mulatta
ENSMZEG00005017865	lsg1	99	63.582	ENSMNEG00000031538	LSG1	99	62.879	Macaca_nemestrina
ENSMZEG00005017865	lsg1	99	63.284	ENSMLEG00000041184	LSG1	99	63.499	Mandrillus_leucophaeus
ENSMZEG00005017865	lsg1	100	80.186	ENSMAMG00000000470	lsg1	100	80.186	Mastacembelus_armatus
ENSMZEG00005017865	lsg1	88	62.649	ENSMGAG00000007050	LSG1	99	62.017	Meleagris_gallopavo
ENSMZEG00005017865	lsg1	91	63.238	ENSMAUG00000016976	Lsg1	93	64.081	Mesocricetus_auratus
ENSMZEG00005017865	lsg1	99	63.567	ENSMICG00000049087	LSG1	99	62.310	Microcebus_murinus
ENSMZEG00005017865	lsg1	99	63.706	ENSMOCG00000022136	Lsg1	99	64.154	Microtus_ochrogaster
ENSMZEG00005017865	lsg1	85	91.250	ENSMMOG00000008884	lsg1	100	77.379	Mola_mola
ENSMZEG00005017865	lsg1	99	55.864	ENSMODG00000019828	LSG1	99	55.864	Monodelphis_domestica
ENSMZEG00005017865	lsg1	100	63.759	MGP_CAROLIEiJ_G0020648	Lsg1	100	65.237	Mus_caroli
ENSMZEG00005017865	lsg1	100	63.459	ENSMUSG00000022538	Lsg1	100	64.634	Mus_musculus
ENSMZEG00005017865	lsg1	98	62.766	MGP_PahariEiJ_G0016352	Lsg1	100	64.079	Mus_pahari
ENSMZEG00005017865	lsg1	100	63.308	MGP_SPRETEiJ_G0021544	Lsg1	100	64.643	Mus_spretus
ENSMZEG00005017865	lsg1	100	63.843	ENSMPUG00000003734	LSG1	100	63.939	Mustela_putorius_furo
ENSMZEG00005017865	lsg1	100	64.006	ENSMLUG00000012548	LSG1	100	64.555	Myotis_lucifugus
ENSMZEG00005017865	lsg1	99	64.142	ENSNGAG00000021872	Lsg1	99	64.198	Nannospalax_galili
ENSMZEG00005017865	lsg1	99	64.145	ENSNLEG00000008293	LSG1	99	63.922	Nomascus_leucogenys
ENSMZEG00005017865	lsg1	68	68.041	ENSMEUG00000009041	-	84	68.041	Notamacropus_eugenii
ENSMZEG00005017865	lsg1	100	97.059	ENSONIG00000002635	lsg1	100	97.059	Oreochromis_niloticus
ENSMZEG00005017865	lsg1	95	67.038	ENSOANG00000012742	LSG1	99	66.879	Ornithorhynchus_anatinus
ENSMZEG00005017865	lsg1	99	64.599	ENSOCUG00000004817	LSG1	99	64.599	Oryctolagus_cuniculus
ENSMZEG00005017865	lsg1	98	79.140	ENSORLG00000007695	lsg1	100	79.563	Oryzias_latipes
ENSMZEG00005017865	lsg1	98	79.936	ENSORLG00020016286	lsg1	100	79.875	Oryzias_latipes_hni
ENSMZEG00005017865	lsg1	98	78.150	ENSORLG00015012025	lsg1	100	78.783	Oryzias_latipes_hsok
ENSMZEG00005017865	lsg1	98	78.378	ENSOMEG00000022379	lsg1	100	78.605	Oryzias_melastigma
ENSMZEG00005017865	lsg1	99	63.444	ENSOGAG00000003475	LSG1	99	63.501	Otolemur_garnettii
ENSMZEG00005017865	lsg1	100	64.608	ENSOARG00000020403	LSG1	100	63.855	Ovis_aries
ENSMZEG00005017865	lsg1	99	64.222	ENSPPAG00000029271	LSG1	99	63.623	Pan_paniscus
ENSMZEG00005017865	lsg1	100	63.205	ENSPPRG00000010281	LSG1	100	63.353	Panthera_pardus
ENSMZEG00005017865	lsg1	100	64.018	ENSPTIG00000010789	LSG1	100	64.168	Panthera_tigris_altaica
ENSMZEG00005017865	lsg1	99	64.072	ENSPTRG00000015760	LSG1	99	63.473	Pan_troglodytes
ENSMZEG00005017865	lsg1	99	63.433	ENSPANG00000018249	LSG1	99	62.424	Papio_anubis
ENSMZEG00005017865	lsg1	99	72.093	ENSPKIG00000002895	lsg1	99	72.952	Paramormyrops_kingsleyae
ENSMZEG00005017865	lsg1	96	60.796	ENSPSIG00000009821	LSG1	99	59.724	Pelodiscus_sinensis
ENSMZEG00005017865	lsg1	95	76.710	ENSPMGG00000000931	lsg1	100	76.710	Periophthalmus_magnuspinnatus
ENSMZEG00005017865	lsg1	99	63.957	ENSPEMG00000012082	-	99	63.278	Peromyscus_maniculatus_bairdii
ENSMZEG00005017865	lsg1	99	60.538	ENSPMAG00000007451	lsg1	99	59.940	Petromyzon_marinus
ENSMZEG00005017865	lsg1	98	66.667	ENSPCIG00000013890	LSG1	81	66.667	Phascolarctos_cinereus
ENSMZEG00005017865	lsg1	98	82.616	ENSPFOG00000021882	lsg1	100	82.737	Poecilia_formosa
ENSMZEG00005017865	lsg1	98	82.109	ENSPLAG00000019536	lsg1	100	81.931	Poecilia_latipinna
ENSMZEG00005017865	lsg1	98	81.558	ENSPMEG00000017281	lsg1	100	81.860	Poecilia_mexicana
ENSMZEG00005017865	lsg1	98	71.069	ENSPREG00000006048	lsg1	100	70.706	Poecilia_reticulata
ENSMZEG00005017865	lsg1	92	62.885	ENSPPYG00000014425	LSG1	100	62.237	Pongo_abelii
ENSMZEG00005017865	lsg1	89	72.000	ENSPCAG00000005511	LSG1	90	72.000	Procavia_capensis
ENSMZEG00005017865	lsg1	99	63.705	ENSPCOG00000012360	LSG1	99	63.485	Propithecus_coquereli
ENSMZEG00005017865	lsg1	100	98.457	ENSPNYG00000021994	lsg1	100	98.457	Pundamilia_nyererei
ENSMZEG00005017865	lsg1	100	75.926	ENSPNAG00000015533	lsg1	100	75.772	Pygocentrus_nattereri
ENSMZEG00005017865	lsg1	100	63.142	ENSRNOG00000001727	Lsg1	100	64.384	Rattus_norvegicus
ENSMZEG00005017865	lsg1	99	63.378	ENSRBIG00000029053	LSG1	99	63.444	Rhinopithecus_bieti
ENSMZEG00005017865	lsg1	99	63.378	ENSRROG00000037702	LSG1	99	63.444	Rhinopithecus_roxellana
ENSMZEG00005017865	lsg1	82	35.609	YGL099W	LSG1	70	54.438	Saccharomyces_cerevisiae
ENSMZEG00005017865	lsg1	99	64.894	ENSSBOG00000034938	LSG1	99	64.307	Saimiri_boliviensis_boliviensis
ENSMZEG00005017865	lsg1	78	61.450	ENSSHAG00000003487	LSG1	100	62.023	Sarcophilus_harrisii
ENSMZEG00005017865	lsg1	98	73.450	ENSSFOG00015008955	lsg1	100	73.872	Scleropages_formosus
ENSMZEG00005017865	lsg1	98	86.667	ENSSDUG00000004622	lsg1	100	86.625	Seriola_dumerili
ENSMZEG00005017865	lsg1	98	84.286	ENSSLDG00000010869	lsg1	100	84.292	Seriola_lalandi_dorsalis
ENSMZEG00005017865	lsg1	82	66.568	ENSSARG00000012981	LSG1	84	62.810	Sorex_araneus
ENSMZEG00005017865	lsg1	100	66.465	ENSSPUG00000016347	LSG1	100	66.465	Sphenodon_punctatus
ENSMZEG00005017865	lsg1	100	81.960	ENSSPAG00000005508	lsg1	100	82.582	Stegastes_partitus
ENSMZEG00005017865	lsg1	100	62.348	ENSSSCG00000011827	LSG1	100	62.500	Sus_scrofa
ENSMZEG00005017865	lsg1	89	61.242	ENSTGUG00000009068	LSG1	100	60.465	Taeniopygia_guttata
ENSMZEG00005017865	lsg1	98	76.630	ENSTRUG00000017380	lsg1	100	76.899	Takifugu_rubripes
ENSMZEG00005017865	lsg1	98	80.732	ENSTNIG00000015570	lsg1	100	81.056	Tetraodon_nigroviridis
ENSMZEG00005017865	lsg1	100	60.090	ENSTTRG00000000559	LSG1	100	59.337	Tursiops_truncatus
ENSMZEG00005017865	lsg1	100	63.030	ENSUAMG00000012454	LSG1	100	63.308	Ursus_americanus
ENSMZEG00005017865	lsg1	100	63.030	ENSUMAG00000000855	LSG1	100	63.308	Ursus_maritimus
ENSMZEG00005017865	lsg1	95	61.551	ENSVPAG00000012400	LSG1	100	61.234	Vicugna_pacos
ENSMZEG00005017865	lsg1	95	64.320	ENSVVUG00000008956	LSG1	99	62.367	Vulpes_vulpes
ENSMZEG00005017865	lsg1	100	67.023	ENSXETG00000003451	lsg1	100	67.328	Xenopus_tropicalis
ENSMZEG00005017865	lsg1	98	83.200	ENSXCOG00000003239	lsg1	100	83.463	Xiphophorus_couchianus
ENSMZEG00005017865	lsg1	98	81.464	ENSXMAG00000005536	lsg1	100	81.611	Xiphophorus_maculatus