EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005017945 (Gene tree)
Gene ID: 101479866
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 5532 bases
Position: chrLG17:12107052-12112583
Accession: 101479866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005023989	RTC	PF01137.21	1.6e-87	1	1
ENSMZEP00005023989	RTC_insert	PF05189.13	1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024776	-	2045	XM_004569323	ENSMZEP00005023989	366 (aa)	XP_004569380	UPI0003296D02

Gene Model

Click here to download ENSMZEG00005017945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005017945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005017945	rtca	99	70.492	ENSG00000137996	RTCA	100	70.492	Homo_sapiens
ENSMZEG00005017945	rtca	100	92.350	ENSAPOG00000001345	rtca	100	92.350	Acanthochromis_polyacanthus
ENSMZEG00005017945	rtca	73	72.119	ENSAMEG00000008855	RTCA	100	72.119	Ailuropoda_melanoleuca
ENSMZEG00005017945	rtca	99	95.604	ENSACIG00000019643	rtca	100	95.604	Amphilophus_citrinellus
ENSMZEG00005017945	rtca	100	93.169	ENSAOCG00000014979	rtca	100	93.169	Amphiprion_ocellaris
ENSMZEG00005017945	rtca	100	92.896	ENSAPEG00000006945	rtca	100	92.896	Amphiprion_percula
ENSMZEG00005017945	rtca	95	91.977	ENSATEG00000006315	rtca	96	91.977	Anabas_testudineus
ENSMZEG00005017945	rtca	95	66.856	ENSAPLG00000015430	RTCA	100	66.856	Anas_platyrhynchos
ENSMZEG00005017945	rtca	98	70.914	ENSANAG00000025446	RTCA	99	70.914	Aotus_nancymaae
ENSMZEG00005017945	rtca	100	100.000	ENSACLG00000020770	rtca	100	100.000	Astatotilapia_calliptera
ENSMZEG00005017945	rtca	99	81.044	ENSAMXG00000043271	rtca	100	81.044	Astyanax_mexicanus
ENSMZEG00005017945	rtca	99	71.038	ENSBTAG00000006321	RTCA	100	71.038	Bos_taurus
ENSMZEG00005017945	rtca	99	70.219	ENSCJAG00000003398	RTCA	100	70.219	Callithrix_jacchus
ENSMZEG00005017945	rtca	99	70.219	ENSCAFG00000020010	RTCA	68	70.219	Canis_familiaris
ENSMZEG00005017945	rtca	99	70.219	ENSCAFG00020011528	RTCA	57	70.219	Canis_lupus_dingo
ENSMZEG00005017945	rtca	99	70.765	ENSCHIG00000018937	RTCA	100	70.765	Capra_hircus
ENSMZEG00005017945	rtca	99	70.027	ENSTSYG00000011305	RTCA	100	70.027	Carlito_syrichta
ENSMZEG00005017945	rtca	99	69.672	ENSCCAG00000021844	RTCA	100	69.672	Cebus_capucinus
ENSMZEG00005017945	rtca	99	68.074	ENSCATG00000019364	RTCA	100	70.550	Cercocebus_atys
ENSMZEG00005017945	rtca	86	71.835	ENSCLAG00000006125	RTCA	100	71.835	Chinchilla_lanigera
ENSMZEG00005017945	rtca	99	70.219	ENSCSAG00000001509	RTCA	100	70.219	Chlorocebus_sabaeus
ENSMZEG00005017945	rtca	98	69.806	ENSCHOG00000005211	RTCA	99	69.806	Choloepus_hoffmanni
ENSMZEG00005017945	rtca	99	66.849	ENSCPBG00000026658	RTCA	100	66.849	Chrysemys_picta_bellii
ENSMZEG00005017945	rtca	99	54.670	ENSCING00000007875	-	99	54.670	Ciona_intestinalis
ENSMZEG00005017945	rtca	99	53.846	ENSCSAVG00000007269	-	99	53.846	Ciona_savignyi
ENSMZEG00005017945	rtca	99	69.945	ENSCANG00000040106	RTCA	100	69.945	Colobus_angolensis_palliatus
ENSMZEG00005017945	rtca	73	70.632	ENSCGRG00001013163	Rtca	85	70.632	Cricetulus_griseus_chok1gshd
ENSMZEG00005017945	rtca	98	84.637	ENSCSEG00000000530	rtca	96	84.637	Cynoglossus_semilaevis
ENSMZEG00005017945	rtca	99	72.404	ENSCVAG00000021809	rtca	100	72.404	Cyprinodon_variegatus
ENSMZEG00005017945	rtca	99	79.670	ENSDARG00000002215	rtca	100	79.670	Danio_rerio
ENSMZEG00005017945	rtca	99	70.765	ENSDNOG00000000456	RTCA	100	70.765	Dasypus_novemcinctus
ENSMZEG00005017945	rtca	99	70.219	ENSDORG00000005448	Rtca	100	70.219	Dipodomys_ordii
ENSMZEG00005017945	rtca	99	40.496	FBgn0025630	Rtca	99	40.496	Drosophila_melanogaster
ENSMZEG00005017945	rtca	93	52.616	ENSEBUG00000008556	rtca	95	52.616	Eptatretus_burgeri
ENSMZEG00005017945	rtca	99	70.492	ENSEASG00005015926	RTCA	100	70.492	Equus_asinus_asinus
ENSMZEG00005017945	rtca	99	70.492	ENSECAG00000019831	RTCA	100	70.492	Equus_caballus
ENSMZEG00005017945	rtca	91	63.873	ENSEEUG00000001165	RTCA	100	63.873	Erinaceus_europaeus
ENSMZEG00005017945	rtca	98	78.552	ENSELUG00000003741	rtca	99	78.552	Esox_lucius
ENSMZEG00005017945	rtca	99	70.572	ENSFCAG00000024460	RTCA	100	70.572	Felis_catus
ENSMZEG00005017945	rtca	92	67.456	ENSFALG00000002443	RTCA	91	67.456	Ficedula_albicollis
ENSMZEG00005017945	rtca	99	69.399	ENSFDAG00000012070	-	100	69.399	Fukomys_damarensis
ENSMZEG00005017945	rtca	98	55.525	ENSFDAG00000016084	-	100	55.525	Fukomys_damarensis
ENSMZEG00005017945	rtca	55	88.500	ENSFHEG00000002868	rtca	92	83.256	Fundulus_heteroclitus
ENSMZEG00005017945	rtca	99	78.571	ENSGMOG00000013264	rtca	100	78.571	Gadus_morhua
ENSMZEG00005017945	rtca	99	67.397	ENSGALG00000005277	RTCA	100	67.397	Gallus_gallus
ENSMZEG00005017945	rtca	100	90.437	ENSGAFG00000011853	rtca	100	90.437	Gambusia_affinis
ENSMZEG00005017945	rtca	99	87.088	ENSGACG00000013497	rtca	100	87.088	Gasterosteus_aculeatus
ENSMZEG00005017945	rtca	80	66.212	ENSGAGG00000023306	RTCA	100	66.212	Gopherus_agassizii
ENSMZEG00005017945	rtca	99	69.399	ENSGGOG00000044018	-	100	69.399	Gorilla_gorilla
ENSMZEG00005017945	rtca	99	69.945	ENSGGOG00000009546	-	100	69.945	Gorilla_gorilla
ENSMZEG00005017945	rtca	100	99.727	ENSHBUG00000002114	rtca	100	99.727	Haplochromis_burtoni
ENSMZEG00005017945	rtca	99	69.672	ENSHGLG00000002617	RTCA	100	69.672	Heterocephalus_glaber_female
ENSMZEG00005017945	rtca	99	69.672	ENSHGLG00100006056	RTCA	100	69.672	Heterocephalus_glaber_male
ENSMZEG00005017945	rtca	99	78.356	ENSHCOG00000020628	rtca	90	78.356	Hippocampus_comes
ENSMZEG00005017945	rtca	99	79.670	ENSIPUG00000024803	rtca	100	79.670	Ictalurus_punctatus
ENSMZEG00005017945	rtca	99	65.574	ENSSTOG00000013528	-	100	65.574	Ictidomys_tridecemlineatus
ENSMZEG00005017945	rtca	99	62.022	ENSSTOG00000033099	-	100	62.022	Ictidomys_tridecemlineatus
ENSMZEG00005017945	rtca	99	51.233	ENSJJAG00000016178	Rtca	100	51.233	Jaculus_jaculus
ENSMZEG00005017945	rtca	100	89.891	ENSKMAG00000006651	rtca	100	89.891	Kryptolebias_marmoratus
ENSMZEG00005017945	rtca	87	87.147	ENSLBEG00000002448	-	99	87.147	Labrus_bergylta
ENSMZEG00005017945	rtca	98	88.056	ENSLBEG00000028971	rtca	99	88.056	Labrus_bergylta
ENSMZEG00005017945	rtca	99	67.671	ENSLACG00000013666	RTCA	100	67.671	Latimeria_chalumnae
ENSMZEG00005017945	rtca	99	74.795	ENSLOCG00000000093	rtca	99	74.795	Lepisosteus_oculatus
ENSMZEG00005017945	rtca	99	69.672	ENSLAFG00000001473	RTCA	100	69.672	Loxodonta_africana
ENSMZEG00005017945	rtca	99	70.219	ENSMFAG00000034132	RTCA	100	70.219	Macaca_fascicularis
ENSMZEG00005017945	rtca	99	70.219	ENSMMUG00000019105	RTCA	100	70.219	Macaca_mulatta
ENSMZEG00005017945	rtca	84	70.227	ENSMNEG00000037163	RTCA	100	70.227	Macaca_nemestrina
ENSMZEG00005017945	rtca	99	57.923	ENSMLEG00000042151	RTCA	100	57.923	Mandrillus_leucophaeus
ENSMZEG00005017945	rtca	99	93.132	ENSMAMG00000016536	rtca	100	93.132	Mastacembelus_armatus
ENSMZEG00005017945	rtca	87	67.925	ENSMGAG00000006892	RTCA	99	67.925	Meleagris_gallopavo
ENSMZEG00005017945	rtca	99	70.219	ENSMAUG00000008488	Rtca	100	70.219	Mesocricetus_auratus
ENSMZEG00005017945	rtca	84	71.197	ENSMICG00000008643	RTCA	100	71.197	Microcebus_murinus
ENSMZEG00005017945	rtca	99	69.126	ENSMOCG00000016660	Rtca	100	69.126	Microtus_ochrogaster
ENSMZEG00005017945	rtca	84	89.577	ENSMMOG00000007750	rtca	100	89.577	Mola_mola
ENSMZEG00005017945	rtca	99	69.945	ENSMODG00000003557	RTCA	100	69.945	Monodelphis_domestica
ENSMZEG00005017945	rtca	99	91.758	ENSMALG00000020844	rtca	100	91.758	Monopterus_albus
ENSMZEG00005017945	rtca	99	69.126	MGP_CAROLIEiJ_G0025565	Rtca	100	69.126	Mus_caroli
ENSMZEG00005017945	rtca	99	68.852	ENSMUSG00000000339	Rtca	100	68.852	Mus_musculus
ENSMZEG00005017945	rtca	99	69.126	MGP_PahariEiJ_G0027011	Rtca	100	69.126	Mus_pahari
ENSMZEG00005017945	rtca	99	69.126	MGP_SPRETEiJ_G0026515	Rtca	100	69.126	Mus_spretus
ENSMZEG00005017945	rtca	99	70.492	ENSMPUG00000012119	RTCA	100	70.492	Mustela_putorius_furo
ENSMZEG00005017945	rtca	99	67.302	ENSMLUG00000009922	RTCA	100	67.302	Myotis_lucifugus
ENSMZEG00005017945	rtca	99	69.399	ENSNGAG00000011540	Rtca	99	69.399	Nannospalax_galili
ENSMZEG00005017945	rtca	100	99.180	ENSNBRG00000003062	rtca	100	99.180	Neolamprologus_brichardi
ENSMZEG00005017945	rtca	99	70.219	ENSNLEG00000031426	RTCA	100	70.219	Nomascus_leucogenys
ENSMZEG00005017945	rtca	73	67.407	ENSOPRG00000012092	RTCA	71	67.407	Ochotona_princeps
ENSMZEG00005017945	rtca	95	70.690	ENSODEG00000006990	RTCA	96	70.940	Octodon_degus
ENSMZEG00005017945	rtca	100	98.361	ENSONIG00000007753	rtca	100	98.361	Oreochromis_niloticus
ENSMZEG00005017945	rtca	86	70.978	ENSOANG00000012055	RTCA	98	70.978	Ornithorhynchus_anatinus
ENSMZEG00005017945	rtca	99	70.300	ENSOCUG00000014247	RTCA	100	70.300	Oryctolagus_cuniculus
ENSMZEG00005017945	rtca	99	89.286	ENSORLG00000013605	rtca	100	89.286	Oryzias_latipes
ENSMZEG00005017945	rtca	99	89.560	ENSORLG00020001904	rtca	100	89.560	Oryzias_latipes_hni
ENSMZEG00005017945	rtca	99	89.286	ENSORLG00015021064	rtca	100	89.286	Oryzias_latipes_hsok
ENSMZEG00005017945	rtca	99	88.462	ENSOMEG00000000756	rtca	100	88.462	Oryzias_melastigma
ENSMZEG00005017945	rtca	99	64.754	ENSOGAG00000005627	RTCA	100	64.754	Otolemur_garnettii
ENSMZEG00005017945	rtca	86	71.069	ENSOARG00000018122	RTCA	100	71.069	Ovis_aries
ENSMZEG00005017945	rtca	99	67.546	ENSPPAG00000035119	RTCA	100	69.903	Pan_paniscus
ENSMZEG00005017945	rtca	99	70.765	ENSPPRG00000000350	RTCA	100	70.765	Panthera_pardus
ENSMZEG00005017945	rtca	99	70.300	ENSPTIG00000012816	RTCA	100	70.300	Panthera_tigris_altaica
ENSMZEG00005017945	rtca	99	67.546	ENSPTRG00000001004	RTCA	100	69.903	Pan_troglodytes
ENSMZEG00005017945	rtca	99	70.219	ENSPANG00000000346	RTCA	100	70.219	Papio_anubis
ENSMZEG00005017945	rtca	99	80.495	ENSPKIG00000001653	rtca	100	80.495	Paramormyrops_kingsleyae
ENSMZEG00005017945	rtca	99	66.575	ENSPSIG00000011408	RTCA	100	66.575	Pelodiscus_sinensis
ENSMZEG00005017945	rtca	99	69.399	ENSPEMG00000018582	Rtca	100	69.399	Peromyscus_maniculatus_bairdii
ENSMZEG00005017945	rtca	99	56.164	ENSPMAG00000009110	rtca	99	56.164	Petromyzon_marinus
ENSMZEG00005017945	rtca	99	70.219	ENSPCIG00000007684	RTCA	100	70.219	Phascolarctos_cinereus
ENSMZEG00005017945	rtca	99	91.781	ENSPFOG00000004824	rtca	100	91.781	Poecilia_formosa
ENSMZEG00005017945	rtca	100	91.803	ENSPLAG00000011753	rtca	100	91.803	Poecilia_latipinna
ENSMZEG00005017945	rtca	100	91.803	ENSPMEG00000020469	rtca	100	91.803	Poecilia_mexicana
ENSMZEG00005017945	rtca	100	90.984	ENSPREG00000001365	rtca	100	90.984	Poecilia_reticulata
ENSMZEG00005017945	rtca	99	70.492	ENSPPYG00000001115	RTCA	100	70.492	Pongo_abelii
ENSMZEG00005017945	rtca	99	67.575	ENSPCAG00000005076	RTCA	100	67.575	Procavia_capensis
ENSMZEG00005017945	rtca	99	70.765	ENSPCOG00000005603	RTCA	100	70.765	Propithecus_coquereli
ENSMZEG00005017945	rtca	99	66.316	ENSPVAG00000009478	RTCA	100	66.316	Pteropus_vampyrus
ENSMZEG00005017945	rtca	100	100.000	ENSPNYG00000004722	rtca	100	100.000	Pundamilia_nyererei
ENSMZEG00005017945	rtca	99	80.769	ENSPNAG00000022270	rtca	100	80.769	Pygocentrus_nattereri
ENSMZEG00005017945	rtca	99	68.579	ENSRNOG00000014575	Rtca	100	68.579	Rattus_norvegicus
ENSMZEG00005017945	rtca	99	67.282	ENSRBIG00000041180	RTCA	100	69.579	Rhinopithecus_bieti
ENSMZEG00005017945	rtca	99	69.672	ENSRROG00000024929	RTCA	100	69.672	Rhinopithecus_roxellana
ENSMZEG00005017945	rtca	99	69.399	ENSSBOG00000028626	RTCA	100	69.399	Saimiri_boliviensis_boliviensis
ENSMZEG00005017945	rtca	99	70.219	ENSSHAG00000001758	RTCA	100	70.219	Sarcophilus_harrisii
ENSMZEG00005017945	rtca	100	83.784	ENSSMAG00000014680	rtca	100	83.784	Scophthalmus_maximus
ENSMZEG00005017945	rtca	98	91.341	ENSSDUG00000015585	rtca	97	91.111	Seriola_dumerili
ENSMZEG00005017945	rtca	95	91.404	ENSSLDG00000018985	rtca	95	91.404	Seriola_lalandi_dorsalis
ENSMZEG00005017945	rtca	86	65.300	ENSSARG00000013993	RTCA	100	65.300	Sorex_araneus
ENSMZEG00005017945	rtca	100	92.623	ENSSPAG00000011938	rtca	100	92.623	Stegastes_partitus
ENSMZEG00005017945	rtca	99	70.765	ENSSSCG00000006865	RTCA	100	70.765	Sus_scrofa
ENSMZEG00005017945	rtca	99	68.493	ENSTGUG00000005154	RTCA	100	68.493	Taeniopygia_guttata
ENSMZEG00005017945	rtca	99	89.560	ENSTRUG00000008799	rtca	100	89.560	Takifugu_rubripes
ENSMZEG00005017945	rtca	99	85.714	ENSTNIG00000004725	rtca	100	85.714	Tetraodon_nigroviridis
ENSMZEG00005017945	rtca	59	54.545	ENSTBEG00000000943	RTCA	61	54.545	Tupaia_belangeri
ENSMZEG00005017945	rtca	99	68.338	ENSTTRG00000015327	RTCA	100	68.338	Tursiops_truncatus
ENSMZEG00005017945	rtca	93	69.679	ENSUAMG00000017265	RTCA	96	69.679	Ursus_americanus
ENSMZEG00005017945	rtca	99	69.945	ENSUMAG00000007881	RTCA	100	69.945	Ursus_maritimus
ENSMZEG00005017945	rtca	86	62.776	ENSVPAG00000001039	RTCA	84	62.776	Vicugna_pacos
ENSMZEG00005017945	rtca	99	70.219	ENSVVUG00000022041	RTCA	68	70.219	Vulpes_vulpes
ENSMZEG00005017945	rtca	99	58.038	ENSXETG00000031661	RTCA	99	58.038	Xenopus_tropicalis
ENSMZEG00005017945	rtca	99	79.396	ENSXCOG00000008002	rtca	100	79.396	Xiphophorus_couchianus
ENSMZEG00005017945	rtca	100	90.710	ENSXMAG00000005482	rtca	100	90.710	Xiphophorus_maculatus