EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005018014 (Gene tree)
Gene ID: 101473302
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 24379 bases
Position: chrLG17:12347543-12371921
Accession: 101473302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005024103	Surp	PF01805.20	1.3e-17	1	1
ENSMZEP00005024088	Surp	PF01805.20	5.4e-17	1	1
ENSMZEP00005024083	Surp	PF01805.20	5.5e-17	1	1
ENSMZEP00005024103	G-patch	PF01585.23	1.8e-10	1	1
ENSMZEP00005024088	G-patch	PF01585.23	1.8e-10	1	1
ENSMZEP00005024083	G-patch	PF01585.23	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024872	-	3858	XM_004569298	ENSMZEP00005024083	922 (aa)	XP_004569355	UPI00032A0FD4
ENSMZET00005024893	-	2628	-	ENSMZEP00005024103	875 (aa)	-	-
ENSMZET00005024877	-	3819	XM_004569300	ENSMZEP00005024088	909 (aa)	XP_004569357	UPI00032A2D6B

Gene Model

Click here to download ENSMZEG00005018014's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005018014's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005018014	cherp	79	67.557	ENSG00000085872	CHERP	99	65.916	Homo_sapiens
ENSMZEG00005018014	cherp	98	66.921	ENSAMEG00000010048	CHERP	99	66.015	Ailuropoda_melanoleuca
ENSMZEG00005018014	cherp	97	75.472	ENSACIG00000019242	cherp	79	80.833	Amphilophus_citrinellus
ENSMZEG00005018014	cherp	100	91.766	ENSAOCG00000017846	cherp	100	91.658	Amphiprion_ocellaris
ENSMZEG00005018014	cherp	100	91.757	ENSAPEG00000021128	cherp	100	91.866	Amphiprion_percula
ENSMZEG00005018014	cherp	100	89.838	ENSATEG00000006341	cherp	99	89.622	Anabas_testudineus
ENSMZEG00005018014	cherp	76	67.083	ENSAPLG00000010773	CHERP	99	63.938	Anas_platyrhynchos
ENSMZEG00005018014	cherp	51	66.802	ENSACAG00000011583	CHERP	99	68.519	Anolis_carolinensis
ENSMZEG00005018014	cherp	79	66.447	ENSANAG00000024284	CHERP	99	65.466	Aotus_nancymaae
ENSMZEG00005018014	cherp	100	99.675	ENSACLG00000020053	cherp	100	99.675	Astatotilapia_calliptera
ENSMZEG00005018014	cherp	79	74.768	ENSAMXG00000021637	cherp	94	71.962	Astyanax_mexicanus
ENSMZEG00005018014	cherp	99	66.238	ENSBTAG00000005289	CHERP	99	65.348	Bos_taurus
ENSMZEG00005018014	cherp	79	66.447	ENSCJAG00000040462	CHERP	99	65.466	Callithrix_jacchus
ENSMZEG00005018014	cherp	79	67.550	ENSCAFG00000015671	CHERP	99	65.989	Canis_familiaris
ENSMZEG00005018014	cherp	85	87.500	ENSCAFG00020009941	CHERP	99	65.433	Canis_lupus_dingo
ENSMZEG00005018014	cherp	87	80.851	ENSCHIG00000013765	CHERP	95	80.645	Capra_hircus
ENSMZEG00005018014	cherp	89	61.747	ENSCAPG00000000910	CHERP	68	66.820	Cavia_aperea
ENSMZEG00005018014	cherp	79	66.010	ENSCPOG00000019949	CHERP	99	65.111	Cavia_porcellus
ENSMZEG00005018014	cherp	79	66.579	ENSCCAG00000031534	CHERP	99	65.572	Cebus_capucinus
ENSMZEG00005018014	cherp	79	66.360	ENSCATG00000031409	CHERP	99	65.397	Cercocebus_atys
ENSMZEG00005018014	cherp	68	66.412	ENSCLAG00000005484	CHERP	93	65.476	Chinchilla_lanigera
ENSMZEG00005018014	cherp	79	67.690	ENSCSAG00000005740	CHERP	99	66.024	Chlorocebus_sabaeus
ENSMZEG00005018014	cherp	99	65.693	ENSCPBG00000014970	CHERP	88	76.418	Chrysemys_picta_bellii
ENSMZEG00005018014	cherp	89	36.012	ENSCING00000004814	-	54	76.923	Ciona_intestinalis
ENSMZEG00005018014	cherp	54	62.097	ENSCSAVG00000002455	-	51	73.958	Ciona_savignyi
ENSMZEG00005018014	cherp	79	68.091	ENSCANG00000032053	CHERP	99	65.916	Colobus_angolensis_palliatus
ENSMZEG00005018014	cherp	79	65.666	ENSCGRG00001023316	Cherp	99	65.195	Cricetulus_griseus_chok1gshd
ENSMZEG00005018014	cherp	78	66.889	ENSCGRG00000015901	Cherp	99	66.060	Cricetulus_griseus_crigri
ENSMZEG00005018014	cherp	80	84.730	ENSCSEG00000019700	cherp	100	84.459	Cynoglossus_semilaevis
ENSMZEG00005018014	cherp	75	83.673	ENSCVAG00000003622	cherp	97	80.926	Cyprinodon_variegatus
ENSMZEG00005018014	cherp	100	73.742	ENSDARG00000021812	cherp	100	79.767	Danio_rerio
ENSMZEG00005018014	cherp	79	66.622	ENSDORG00000027623	Cherp	90	81.720	Dipodomys_ordii
ENSMZEG00005018014	cherp	58	75.926	ENSETEG00000019543	CHERP	83	75.221	Echinops_telfairi
ENSMZEG00005018014	cherp	79	66.887	ENSEASG00005000428	CHERP	92	65.989	Equus_asinus_asinus
ENSMZEG00005018014	cherp	78	68.273	ENSECAG00000012713	CHERP	99	65.989	Equus_caballus
ENSMZEG00005018014	cherp	99	75.248	ENSELUG00000023026	cherp	98	75.470	Esox_lucius
ENSMZEG00005018014	cherp	79	65.755	ENSFCAG00000013172	CHERP	99	65.190	Felis_catus
ENSMZEG00005018014	cherp	79	67.742	ENSFALG00000013410	CHERP	86	65.189	Ficedula_albicollis
ENSMZEG00005018014	cherp	77	58.943	ENSFDAG00000015981	CHERP	100	57.379	Fukomys_damarensis
ENSMZEG00005018014	cherp	92	89.552	ENSFHEG00000009720	cherp	77	98.246	Fundulus_heteroclitus
ENSMZEG00005018014	cherp	98	79.868	ENSGMOG00000008654	cherp	99	79.846	Gadus_morhua
ENSMZEG00005018014	cherp	79	67.833	ENSGALG00000003824	CHERP	88	64.432	Gallus_gallus
ENSMZEG00005018014	cherp	99	84.125	ENSGACG00000002053	cherp	99	83.693	Gasterosteus_aculeatus
ENSMZEG00005018014	cherp	88	81.720	ENSGAGG00000014208	CHERP	88	76.418	Gopherus_agassizii
ENSMZEG00005018014	cherp	100	98.915	ENSHBUG00000007405	cherp	100	98.915	Haplochromis_burtoni
ENSMZEG00005018014	cherp	79	66.976	ENSHGLG00000002993	CHERP	99	66.559	Heterocephalus_glaber_female
ENSMZEG00005018014	cherp	79	81.181	ENSHCOG00000007691	cherp	100	79.487	Hippocampus_comes
ENSMZEG00005018014	cherp	79	77.442	ENSIPUG00000025008	cherp	100	72.234	Ictalurus_punctatus
ENSMZEG00005018014	cherp	78	68.250	ENSSTOG00000012089	CHERP	99	66.342	Ictidomys_tridecemlineatus
ENSMZEG00005018014	cherp	99	62.142	ENSJJAG00000017982	Cherp	81	66.445	Jaculus_jaculus
ENSMZEG00005018014	cherp	100	87.076	ENSKMAG00000009101	cherp	100	87.076	Kryptolebias_marmoratus
ENSMZEG00005018014	cherp	78	87.430	ENSLBEG00000007586	cherp	91	88.434	Labrus_bergylta
ENSMZEG00005018014	cherp	79	66.710	ENSLACG00000018221	CHERP	80	86.111	Latimeria_chalumnae
ENSMZEG00005018014	cherp	99	73.262	ENSLOCG00000003654	cherp	99	72.650	Lepisosteus_oculatus
ENSMZEG00005018014	cherp	79	66.667	ENSLAFG00000009096	CHERP	100	67.135	Loxodonta_africana
ENSMZEG00005018014	cherp	79	66.447	ENSMFAG00000033267	CHERP	99	65.466	Macaca_fascicularis
ENSMZEG00005018014	cherp	99	62.500	ENSMMUG00000012958	CHERP	82	65.921	Macaca_mulatta
ENSMZEG00005018014	cherp	79	66.447	ENSMNEG00000004125	CHERP	99	65.466	Macaca_nemestrina
ENSMZEG00005018014	cherp	69	83.444	ENSMLEG00000044337	CHERP	99	72.477	Mandrillus_leucophaeus
ENSMZEG00005018014	cherp	100	89.243	ENSMAMG00000022269	cherp	100	89.572	Mastacembelus_armatus
ENSMZEG00005018014	cherp	68	69.449	ENSMGAG00000005571	CHERP	93	65.644	Meleagris_gallopavo
ENSMZEG00005018014	cherp	79	65.576	ENSMAUG00000015856	Cherp	99	65.121	Mesocricetus_auratus
ENSMZEG00005018014	cherp	78	67.608	ENSMICG00000004577	CHERP	99	65.591	Microcebus_murinus
ENSMZEG00005018014	cherp	79	67.154	ENSMOCG00000014697	Cherp	99	66.134	Microtus_ochrogaster
ENSMZEG00005018014	cherp	99	87.652	ENSMMOG00000008525	cherp	97	86.990	Mola_mola
ENSMZEG00005018014	cherp	100	88.997	ENSMALG00000020688	cherp	100	89.752	Monopterus_albus
ENSMZEG00005018014	cherp	79	66.271	MGP_CAROLIEiJ_G0031220	Cherp	99	65.820	Mus_caroli
ENSMZEG00005018014	cherp	99	64.687	ENSMUSG00000052488	Cherp	99	64.376	Mus_musculus
ENSMZEG00005018014	cherp	79	66.755	MGP_PahariEiJ_G0021685	Cherp	99	66.738	Mus_pahari
ENSMZEG00005018014	cherp	79	66.446	MGP_SPRETEiJ_G0032341	Cherp	99	65.960	Mus_spretus
ENSMZEG00005018014	cherp	79	66.843	ENSMPUG00000016023	CHERP	77	66.223	Mustela_putorius_furo
ENSMZEG00005018014	cherp	99	61.294	ENSMLUG00000013881	CHERP	99	60.554	Myotis_lucifugus
ENSMZEG00005018014	cherp	79	65.059	ENSNGAG00000023323	Cherp	99	65.510	Nannospalax_galili
ENSMZEG00005018014	cherp	100	92.625	ENSNBRG00000001914	cherp	100	92.625	Neolamprologus_brichardi
ENSMZEG00005018014	cherp	79	67.690	ENSNLEG00000005536	CHERP	99	66.024	Nomascus_leucogenys
ENSMZEG00005018014	cherp	68	82.418	ENSMEUG00000010840	CHERP	91	76.451	Notamacropus_eugenii
ENSMZEG00005018014	cherp	78	67.930	ENSODEG00000001528	CHERP	81	66.576	Octodon_degus
ENSMZEG00005018014	cherp	100	98.373	ENSONIG00000007686	cherp	100	98.373	Oreochromis_niloticus
ENSMZEG00005018014	cherp	99	85.226	ENSORLG00000000138	cherp	100	83.956	Oryzias_latipes
ENSMZEG00005018014	cherp	99	85.006	ENSORLG00020013142	cherp	100	83.736	Oryzias_latipes_hni
ENSMZEG00005018014	cherp	99	84.785	ENSORLG00015008911	cherp	100	83.516	Oryzias_latipes_hsok
ENSMZEG00005018014	cherp	99	85.525	ENSOMEG00000016947	cherp	99	84.530	Oryzias_melastigma
ENSMZEG00005018014	cherp	79	66.534	ENSOGAG00000005834	CHERP	99	65.064	Otolemur_garnettii
ENSMZEG00005018014	cherp	79	58.988	ENSOARG00000018876	CHERP	78	59.170	Ovis_aries
ENSMZEG00005018014	cherp	79	66.229	ENSPPAG00000029195	CHERP	99	65.291	Pan_paniscus
ENSMZEG00005018014	cherp	79	65.755	ENSPPRG00000003275	CHERP	99	65.190	Panthera_pardus
ENSMZEG00005018014	cherp	97	57.180	ENSPTIG00000019778	CHERP	99	53.304	Panthera_tigris_altaica
ENSMZEG00005018014	cherp	79	67.333	ENSPTRG00000010647	CHERP	99	65.846	Pan_troglodytes
ENSMZEG00005018014	cherp	79	66.447	ENSPANG00000011698	CHERP	99	65.466	Papio_anubis
ENSMZEG00005018014	cherp	78	67.353	ENSPKIG00000000423	cherp	99	67.427	Paramormyrops_kingsleyae
ENSMZEG00005018014	cherp	98	66.377	ENSPSIG00000011974	CHERP	100	64.390	Pelodiscus_sinensis
ENSMZEG00005018014	cherp	98	70.753	ENSPMGG00000023606	cherp	99	64.207	Periophthalmus_magnuspinnatus
ENSMZEG00005018014	cherp	79	62.338	ENSPEMG00000011238	Cherp	99	65.272	Peromyscus_maniculatus_bairdii
ENSMZEG00005018014	cherp	77	55.817	ENSPCIG00000019615	CHERP	95	65.928	Phascolarctos_cinereus
ENSMZEG00005018014	cherp	99	85.382	ENSPFOG00000016899	cherp	99	85.271	Poecilia_formosa
ENSMZEG00005018014	cherp	85	83.548	ENSPMEG00000002214	cherp	98	69.948	Poecilia_mexicana
ENSMZEG00005018014	cherp	99	85.920	ENSPREG00000020774	cherp	99	85.809	Poecilia_reticulata
ENSMZEG00005018014	cherp	79	65.317	ENSPPYG00000009691	CHERP	99	64.401	Pongo_abelii
ENSMZEG00005018014	cherp	89	79.787	ENSPCAG00000001337	CHERP	90	79.570	Procavia_capensis
ENSMZEG00005018014	cherp	89	79.787	ENSPVAG00000004320	CHERP	90	79.570	Pteropus_vampyrus
ENSMZEG00005018014	cherp	100	99.241	ENSPNYG00000003942	cherp	100	99.241	Pundamilia_nyererei
ENSMZEG00005018014	cherp	79	76.267	ENSPNAG00000017179	cherp	100	71.762	Pygocentrus_nattereri
ENSMZEG00005018014	cherp	79	66.271	ENSRNOG00000012323	Cherp	99	65.820	Rattus_norvegicus
ENSMZEG00005018014	cherp	79	67.690	ENSRBIG00000038621	CHERP	99	66.094	Rhinopithecus_bieti
ENSMZEG00005018014	cherp	79	66.447	ENSRROG00000040770	CHERP	99	65.466	Rhinopithecus_roxellana
ENSMZEG00005018014	cherp	99	61.164	ENSSBOG00000014492	CHERP	99	65.397	Saimiri_boliviensis_boliviensis
ENSMZEG00005018014	cherp	78	54.569	ENSSHAG00000010752	CHERP	98	65.648	Sarcophilus_harrisii
ENSMZEG00005018014	cherp	62	83.951	ENSSFOG00015008022	cherp	88	83.951	Scleropages_formosus
ENSMZEG00005018014	cherp	100	86.681	ENSSMAG00000005362	cherp	100	87.325	Scophthalmus_maximus
ENSMZEG00005018014	cherp	100	91.605	ENSSDUG00000019712	cherp	100	91.711	Seriola_dumerili
ENSMZEG00005018014	cherp	100	92.176	ENSSLDG00000012659	cherp	100	92.283	Seriola_lalandi_dorsalis
ENSMZEG00005018014	cherp	99	66.958	ENSSPUG00000008901	CHERP	99	66.448	Sphenodon_punctatus
ENSMZEG00005018014	cherp	100	92.091	ENSSPAG00000010681	cherp	100	92.637	Stegastes_partitus
ENSMZEG00005018014	cherp	79	66.887	ENSSSCG00000013860	CHERP	99	66.453	Sus_scrofa
ENSMZEG00005018014	cherp	79	67.517	ENSTGUG00000000680	CHERP	99	65.804	Taeniopygia_guttata
ENSMZEG00005018014	cherp	100	80.556	ENSTRUG00000007429	cherp	100	81.624	Takifugu_rubripes
ENSMZEG00005018014	cherp	99	81.264	ENSTNIG00000003363	cherp	88	86.022	Tetraodon_nigroviridis
ENSMZEG00005018014	cherp	68	66.406	ENSTTRG00000015006	CHERP	89	68.462	Tursiops_truncatus
ENSMZEG00005018014	cherp	99	61.588	ENSUAMG00000017295	CHERP	80	64.932	Ursus_americanus
ENSMZEG00005018014	cherp	99	61.338	ENSVVUG00000016546	CHERP	99	65.158	Vulpes_vulpes