EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005018081 (Gene tree)
Gene ID: 101471052
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11606 bases
Position: chrLG17:12593021-12604626
Accession: 101471052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005024176	ResIII	PF04851.15	8e-10	1	1
ENSMZEP00005024174	ResIII	PF04851.15	9.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005024967	-	3307	XM_004569290	ENSMZEP00005024174	739 (aa)	XP_004569347	UPI000D2FDD78
ENSMZET00005024969	-	2160	-	ENSMZEP00005024176	719 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005018081's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005018081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005018081	rad54l	99	77.212	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSMZEG00005018081	rad54l	99	86.122	ENSAPOG00000011643	rad54l	99	86.122	Acanthochromis_polyacanthus
ENSMZEG00005018081	rad54l	99	76.376	ENSAMEG00000013902	RAD54L	99	76.376	Ailuropoda_melanoleuca
ENSMZEG00005018081	rad54l	99	90.921	ENSACIG00000001939	rad54l	99	90.921	Amphilophus_citrinellus
ENSMZEG00005018081	rad54l	99	89.266	ENSAOCG00000017576	rad54l	99	89.266	Amphiprion_ocellaris
ENSMZEG00005018081	rad54l	96	89.170	ENSAPEG00000020658	rad54l	98	89.170	Amphiprion_percula
ENSMZEG00005018081	rad54l	95	89.744	ENSATEG00000006767	rad54l	100	89.744	Anabas_testudineus
ENSMZEG00005018081	rad54l	97	80.115	ENSAPLG00000006389	RAD54L	99	81.545	Anas_platyrhynchos
ENSMZEG00005018081	rad54l	99	80.215	ENSACAG00000002312	RAD54L	99	80.215	Anolis_carolinensis
ENSMZEG00005018081	rad54l	99	76.913	ENSANAG00000035439	RAD54L	99	76.944	Aotus_nancymaae
ENSMZEG00005018081	rad54l	100	99.865	ENSACLG00000018711	rad54l	100	99.865	Astatotilapia_calliptera
ENSMZEG00005018081	rad54l	100	83.827	ENSAMXG00000012777	rad54l	100	83.827	Astyanax_mexicanus
ENSMZEG00005018081	rad54l	99	76.707	ENSBTAG00000019901	RAD54L	99	76.707	Bos_taurus
ENSMZEG00005018081	rad54l	99	56.546	WBGene00004298	rad-54	87	57.703	Caenorhabditis_elegans
ENSMZEG00005018081	rad54l	97	77.191	ENSCJAG00000021080	RAD54L	91	77.191	Callithrix_jacchus
ENSMZEG00005018081	rad54l	99	76.810	ENSCAFG00000004272	RAD54L	99	76.810	Canis_familiaris
ENSMZEG00005018081	rad54l	99	76.779	ENSCAFG00020015066	RAD54L	99	76.779	Canis_lupus_dingo
ENSMZEG00005018081	rad54l	99	76.542	ENSCHIG00000020118	RAD54L	99	76.542	Capra_hircus
ENSMZEG00005018081	rad54l	99	76.305	ENSTSYG00000002032	RAD54L	99	76.305	Carlito_syrichta
ENSMZEG00005018081	rad54l	99	77.212	ENSCPOG00000006768	RAD54L	99	77.212	Cavia_porcellus
ENSMZEG00005018081	rad54l	99	77.346	ENSCCAG00000025783	RAD54L	99	77.346	Cebus_capucinus
ENSMZEG00005018081	rad54l	99	76.810	ENSCATG00000030589	RAD54L	99	76.810	Cercocebus_atys
ENSMZEG00005018081	rad54l	99	77.212	ENSCLAG00000004645	RAD54L	99	77.212	Chinchilla_lanigera
ENSMZEG00005018081	rad54l	99	76.944	ENSCSAG00000001229	RAD54L	99	76.944	Chlorocebus_sabaeus
ENSMZEG00005018081	rad54l	99	79.677	ENSCPBG00000005675	RAD54L	99	79.677	Chrysemys_picta_bellii
ENSMZEG00005018081	rad54l	99	62.516	ENSCING00000024456	-	99	62.387	Ciona_intestinalis
ENSMZEG00005018081	rad54l	100	62.092	ENSCSAVG00000010859	-	100	62.353	Ciona_savignyi
ENSMZEG00005018081	rad54l	99	76.676	ENSCANG00000034891	RAD54L	99	76.676	Colobus_angolensis_palliatus
ENSMZEG00005018081	rad54l	99	76.510	ENSCGRG00001014807	Rad54l	99	76.510	Cricetulus_griseus_chok1gshd
ENSMZEG00005018081	rad54l	99	76.510	ENSCGRG00000016038	Rad54l	99	76.510	Cricetulus_griseus_crigri
ENSMZEG00005018081	rad54l	99	85.460	ENSCSEG00000001983	rad54l	99	85.460	Cynoglossus_semilaevis
ENSMZEG00005018081	rad54l	83	84.211	ENSCVAG00000019561	rad54l	100	84.211	Cyprinodon_variegatus
ENSMZEG00005018081	rad54l	100	82.679	ENSDARG00000018623	rad54l	100	82.679	Danio_rerio
ENSMZEG00005018081	rad54l	99	76.273	ENSDNOG00000003395	RAD54L	99	76.273	Dasypus_novemcinctus
ENSMZEG00005018081	rad54l	99	70.107	ENSDORG00000002632	Rad54l	99	70.107	Dipodomys_ordii
ENSMZEG00005018081	rad54l	99	54.606	FBgn0002989	okr	95	54.606	Drosophila_melanogaster
ENSMZEG00005018081	rad54l	78	76.035	ENSETEG00000000550	RAD54L	78	76.035	Echinops_telfairi
ENSMZEG00005018081	rad54l	99	76.510	ENSEASG00005004511	RAD54L	98	78.394	Equus_asinus_asinus
ENSMZEG00005018081	rad54l	99	77.171	ENSECAG00000008760	RAD54L	99	77.171	Equus_caballus
ENSMZEG00005018081	rad54l	99	73.861	ENSEEUG00000008113	RAD54L	99	73.861	Erinaceus_europaeus
ENSMZEG00005018081	rad54l	100	84.853	ENSELUG00000002295	rad54l	100	84.853	Esox_lucius
ENSMZEG00005018081	rad54l	99	76.005	ENSFCAG00000003444	RAD54L	99	76.005	Felis_catus
ENSMZEG00005018081	rad54l	99	79.273	ENSFALG00000009480	RAD54L	99	79.677	Ficedula_albicollis
ENSMZEG00005018081	rad54l	99	76.944	ENSFDAG00000007806	RAD54L	99	76.944	Fukomys_damarensis
ENSMZEG00005018081	rad54l	63	81.897	ENSFHEG00000009824	rad54l	80	81.897	Fundulus_heteroclitus
ENSMZEG00005018081	rad54l	99	83.356	ENSGMOG00000014568	rad54l	100	83.356	Gadus_morhua
ENSMZEG00005018081	rad54l	99	78.947	ENSGALG00000010356	RAD54L	92	78.947	Gallus_gallus
ENSMZEG00005018081	rad54l	91	84.866	ENSGAFG00000011110	rad54l	100	84.866	Gambusia_affinis
ENSMZEG00005018081	rad54l	100	87.179	ENSGACG00000003111	rad54l	98	87.179	Gasterosteus_aculeatus
ENSMZEG00005018081	rad54l	99	78.976	ENSGAGG00000014089	RAD54L	96	78.976	Gopherus_agassizii
ENSMZEG00005018081	rad54l	99	76.810	ENSGGOG00000010602	RAD54L	99	76.810	Gorilla_gorilla
ENSMZEG00005018081	rad54l	100	99.594	ENSHBUG00000007793	rad54l	100	99.594	Haplochromis_burtoni
ENSMZEG00005018081	rad54l	99	76.944	ENSHGLG00000000753	RAD54L	99	76.944	Heterocephalus_glaber_female
ENSMZEG00005018081	rad54l	99	76.542	ENSHGLG00100016987	RAD54L	99	76.542	Heterocephalus_glaber_male
ENSMZEG00005018081	rad54l	100	81.830	ENSIPUG00000015999	rad54l	100	84.648	Ictalurus_punctatus
ENSMZEG00005018081	rad54l	99	76.604	ENSSTOG00000029125	RAD54L	99	76.604	Ictidomys_tridecemlineatus
ENSMZEG00005018081	rad54l	99	63.539	ENSJJAG00000000235	-	99	63.405	Jaculus_jaculus
ENSMZEG00005018081	rad54l	100	86.216	ENSKMAG00000009944	rad54l	100	86.216	Kryptolebias_marmoratus
ENSMZEG00005018081	rad54l	99	88.043	ENSLBEG00000014617	rad54l	97	90.164	Labrus_bergylta
ENSMZEG00005018081	rad54l	100	83.042	ENSLOCG00000004144	rad54l	100	84.398	Lepisosteus_oculatus
ENSMZEG00005018081	rad54l	99	76.242	ENSLAFG00000007583	RAD54L	99	76.510	Loxodonta_africana
ENSMZEG00005018081	rad54l	99	76.676	ENSMFAG00000031241	RAD54L	99	76.676	Macaca_fascicularis
ENSMZEG00005018081	rad54l	99	76.676	ENSMMUG00000011568	RAD54L	99	76.676	Macaca_mulatta
ENSMZEG00005018081	rad54l	99	76.676	ENSMNEG00000038562	RAD54L	99	76.676	Macaca_nemestrina
ENSMZEG00005018081	rad54l	99	76.810	ENSMLEG00000038145	RAD54L	99	76.810	Mandrillus_leucophaeus
ENSMZEG00005018081	rad54l	99	85.889	ENSMAMG00000022180	rad54l	99	88.018	Mastacembelus_armatus
ENSMZEG00005018081	rad54l	99	79.189	ENSMGAG00000010634	RAD54L	99	79.189	Meleagris_gallopavo
ENSMZEG00005018081	rad54l	99	76.747	ENSMAUG00000020076	Rad54l	99	76.747	Mesocricetus_auratus
ENSMZEG00005018081	rad54l	99	76.944	ENSMICG00000003266	RAD54L	99	76.944	Microcebus_murinus
ENSMZEG00005018081	rad54l	99	76.944	ENSMOCG00000001778	Rad54l	99	76.944	Microtus_ochrogaster
ENSMZEG00005018081	rad54l	99	84.771	ENSMALG00000021148	rad54l	99	84.771	Monopterus_albus
ENSMZEG00005018081	rad54l	99	72.490	MGP_CAROLIEiJ_G0026325	Rad54l	99	72.490	Mus_caroli
ENSMZEG00005018081	rad54l	99	76.408	ENSMUSG00000028702	Rad54l	99	76.408	Mus_musculus
ENSMZEG00005018081	rad54l	99	76.510	MGP_PahariEiJ_G0028657	Rad54l	99	76.510	Mus_pahari
ENSMZEG00005018081	rad54l	99	76.542	MGP_SPRETEiJ_G0027297	Rad54l	99	76.542	Mus_spretus
ENSMZEG00005018081	rad54l	99	76.408	ENSMPUG00000012883	RAD54L	99	76.408	Mustela_putorius_furo
ENSMZEG00005018081	rad54l	99	77.108	ENSMLUG00000003763	RAD54L	99	77.108	Myotis_lucifugus
ENSMZEG00005018081	rad54l	99	76.644	ENSNGAG00000024213	Rad54l	99	76.644	Nannospalax_galili
ENSMZEG00005018081	rad54l	99	76.810	ENSNLEG00000016548	RAD54L	99	76.810	Nomascus_leucogenys
ENSMZEG00005018081	rad54l	95	76.867	ENSMEUG00000006793	RAD54L	100	78.190	Notamacropus_eugenii
ENSMZEG00005018081	rad54l	90	79.791	ENSOPRG00000016016	RAD54L	90	79.791	Ochotona_princeps
ENSMZEG00005018081	rad54l	99	77.078	ENSODEG00000008519	RAD54L	99	77.078	Octodon_degus
ENSMZEG00005018081	rad54l	100	99.053	ENSONIG00000007659	rad54l	100	99.053	Oreochromis_niloticus
ENSMZEG00005018081	rad54l	99	76.841	ENSOCUG00000005229	RAD54L	99	76.841	Oryctolagus_cuniculus
ENSMZEG00005018081	rad54l	100	82.409	ENSORLG00000002958	rad54l	100	82.162	Oryzias_latipes
ENSMZEG00005018081	rad54l	99	82.409	ENSORLG00020006554	rad54l	99	85.441	Oryzias_latipes_hni
ENSMZEG00005018081	rad54l	100	82.162	ENSORLG00015002907	rad54l	100	82.297	Oryzias_latipes_hsok
ENSMZEG00005018081	rad54l	99	83.062	ENSOMEG00000007770	rad54l	99	83.062	Oryzias_melastigma
ENSMZEG00005018081	rad54l	99	76.471	ENSOARG00000002264	RAD54L	99	76.471	Ovis_aries
ENSMZEG00005018081	rad54l	99	76.944	ENSPPAG00000031222	RAD54L	99	76.944	Pan_paniscus
ENSMZEG00005018081	rad54l	99	76.005	ENSPPRG00000010317	RAD54L	99	76.005	Panthera_pardus
ENSMZEG00005018081	rad54l	99	76.005	ENSPTIG00000012200	RAD54L	99	76.005	Panthera_tigris_altaica
ENSMZEG00005018081	rad54l	99	76.944	ENSPTRG00000000689	RAD54L	99	76.944	Pan_troglodytes
ENSMZEG00005018081	rad54l	99	76.810	ENSPANG00000016295	RAD54L	99	76.810	Papio_anubis
ENSMZEG00005018081	rad54l	99	77.205	ENSPKIG00000016172	rad54l	99	77.205	Paramormyrops_kingsleyae
ENSMZEG00005018081	rad54l	99	79.564	ENSPSIG00000003258	RAD54L	99	79.564	Pelodiscus_sinensis
ENSMZEG00005018081	rad54l	99	80.488	ENSPMGG00000016335	rad54l	99	80.488	Periophthalmus_magnuspinnatus
ENSMZEG00005018081	rad54l	99	76.810	ENSPEMG00000011422	Rad54l	99	76.810	Peromyscus_maniculatus_bairdii
ENSMZEG00005018081	rad54l	99	68.378	ENSPMAG00000007719	rad54l	99	68.378	Petromyzon_marinus
ENSMZEG00005018081	rad54l	100	78.523	ENSPCIG00000029032	RAD54L	100	78.523	Phascolarctos_cinereus
ENSMZEG00005018081	rad54l	86	86.950	ENSPFOG00000013732	rad54l	100	86.950	Poecilia_formosa
ENSMZEG00005018081	rad54l	86	83.173	ENSPLAG00000023416	rad54l	99	84.903	Poecilia_latipinna
ENSMZEG00005018081	rad54l	91	85.163	ENSPMEG00000008299	rad54l	100	85.163	Poecilia_mexicana
ENSMZEG00005018081	rad54l	100	84.054	ENSPREG00000019955	rad54l	100	84.054	Poecilia_reticulata
ENSMZEG00005018081	rad54l	99	64.659	ENSPPYG00000001398	RAD54L	99	64.659	Pongo_abelii
ENSMZEG00005018081	rad54l	80	77.295	ENSPCAG00000005323	RAD54L	80	77.295	Procavia_capensis
ENSMZEG00005018081	rad54l	99	76.408	ENSPCOG00000015423	RAD54L	99	76.408	Propithecus_coquereli
ENSMZEG00005018081	rad54l	100	99.305	ENSPNYG00000002942	rad54l	100	99.305	Pundamilia_nyererei
ENSMZEG00005018081	rad54l	100	83.536	ENSPNAG00000012483	rad54l	100	83.536	Pygocentrus_nattereri
ENSMZEG00005018081	rad54l	99	76.542	ENSRNOG00000013148	Rad54l	99	76.542	Rattus_norvegicus
ENSMZEG00005018081	rad54l	99	76.944	ENSRBIG00000043495	RAD54L	99	76.944	Rhinopithecus_bieti
ENSMZEG00005018081	rad54l	99	76.810	ENSRROG00000020844	RAD54L	99	76.810	Rhinopithecus_roxellana
ENSMZEG00005018081	rad54l	84	48.694	YGL163C	RAD54	71	49.922	Saccharomyces_cerevisiae
ENSMZEG00005018081	rad54l	99	77.078	ENSSBOG00000024672	RAD54L	99	77.078	Saimiri_boliviensis_boliviensis
ENSMZEG00005018081	rad54l	100	77.882	ENSSHAG00000000110	RAD54L	100	77.882	Sarcophilus_harrisii
ENSMZEG00005018081	rad54l	100	88.649	ENSSDUG00000019147	rad54l	100	88.649	Seriola_dumerili
ENSMZEG00005018081	rad54l	100	88.649	ENSSLDG00000012330	rad54l	100	88.649	Seriola_lalandi_dorsalis
ENSMZEG00005018081	rad54l	84	76.726	ENSSARG00000006689	RAD54L	100	76.726	Sorex_araneus
ENSMZEG00005018081	rad54l	99	88.043	ENSSPAG00000011016	rad54l	99	88.043	Stegastes_partitus
ENSMZEG00005018081	rad54l	99	76.810	ENSSSCG00000003905	RAD54L	99	76.810	Sus_scrofa
ENSMZEG00005018081	rad54l	99	78.869	ENSTGUG00000008233	RAD54L	99	79.273	Taeniopygia_guttata
ENSMZEG00005018081	rad54l	99	83.148	ENSTRUG00000008410	rad54l	100	82.869	Takifugu_rubripes
ENSMZEG00005018081	rad54l	99	79.810	ENSTNIG00000004716	rad54l	99	79.810	Tetraodon_nigroviridis
ENSMZEG00005018081	rad54l	99	72.363	ENSTTRG00000006315	RAD54L	99	72.363	Tursiops_truncatus
ENSMZEG00005018081	rad54l	99	76.248	ENSUAMG00000011824	RAD54L	99	76.248	Ursus_americanus
ENSMZEG00005018081	rad54l	99	75.034	ENSUMAG00000023603	RAD54L	99	75.034	Ursus_maritimus
ENSMZEG00005018081	rad54l	99	76.944	ENSVVUG00000007201	RAD54L	99	76.944	Vulpes_vulpes
ENSMZEG00005018081	rad54l	96	75.035	ENSXETG00000004369	rad54l	99	75.035	Xenopus_tropicalis
ENSMZEG00005018081	rad54l	55	81.572	ENSXCOG00000016028	rad54l	82	84.127	Xiphophorus_couchianus