EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005018327 (Gene tree)
Gene ID: 101472044
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 18892 bases
Position: chrLG11:19674197-19693088
Accession: 101472044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005024546	tRNA-synt_1g	PF09334.11	3.6e-13	1	1
ENSMZEP00005024525	tRNA-synt_1g	PF09334.11	5.2e-13	1	1
ENSMZEP00005024525	Anticodon_1	PF08264.13	3.7e-36	1	1
ENSMZEP00005024546	Anticodon_1	PF08264.13	8e-28	1	1
ENSMZEP00005024525	tRNA-synt_1	PF00133.22	5.7e-207	1	1
ENSMZEP00005024546	tRNA-synt_1	PF00133.22	6.5e-206	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005025328	-	7944	XM_004550866	ENSMZEP00005024525	1321 (aa)	XP_004550923	-
ENSMZET00005025349	-	3609	-	ENSMZEP00005024546	1202 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005018327's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005018327's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005018327	vars	100	64.325	ENSG00000204394	VARS	99	71.779	Homo_sapiens
ENSMZEG00005018327	vars	98	88.426	ENSAPOG00000020921	vars	97	91.215	Acanthochromis_polyacanthus
ENSMZEG00005018327	vars	98	88.426	ENSAPOG00000020691	vars	97	91.215	Acanthochromis_polyacanthus
ENSMZEG00005018327	vars	100	64.432	ENSAMEG00000006417	VARS	100	64.811	Ailuropoda_melanoleuca
ENSMZEG00005018327	vars	97	93.349	ENSACIG00000013752	vars	100	93.349	Amphilophus_citrinellus
ENSMZEG00005018327	vars	98	91.628	ENSAOCG00000002447	vars	100	91.628	Amphiprion_ocellaris
ENSMZEG00005018327	vars	98	91.550	ENSAPEG00000010638	vars	100	91.550	Amphiprion_percula
ENSMZEG00005018327	vars	100	87.318	ENSATEG00000020219	vars	100	87.334	Anabas_testudineus
ENSMZEG00005018327	vars	87	71.948	ENSACAG00000029133	-	99	71.948	Anolis_carolinensis
ENSMZEG00005018327	vars	100	64.455	ENSANAG00000015453	VARS	100	64.884	Aotus_nancymaae
ENSMZEG00005018327	vars	100	99.849	ENSACLG00000025699	vars	100	99.849	Astatotilapia_calliptera
ENSMZEG00005018327	vars	96	80.815	ENSAMXG00000017716	vars	96	81.563	Astyanax_mexicanus
ENSMZEG00005018327	vars	100	64.799	ENSBTAG00000005631	VARS	100	65.194	Bos_taurus
ENSMZEG00005018327	vars	100	64.088	ENSCJAG00000002604	VARS	100	64.729	Callithrix_jacchus
ENSMZEG00005018327	vars	100	64.246	ENSCAFG00000000636	VARS	100	64.551	Canis_familiaris
ENSMZEG00005018327	vars	93	65.543	ENSCAFG00020020790	VARS	96	65.842	Canis_lupus_dingo
ENSMZEG00005018327	vars	100	64.641	ENSCHIG00000011008	VARS	100	65.349	Capra_hircus
ENSMZEG00005018327	vars	100	64.167	ENSTSYG00000001567	VARS	100	64.651	Carlito_syrichta
ENSMZEG00005018327	vars	91	66.901	ENSCAPG00000013736	VARS	98	67.900	Cavia_aperea
ENSMZEG00005018327	vars	100	63.694	ENSCPOG00000000870	VARS	100	64.369	Cavia_porcellus
ENSMZEG00005018327	vars	100	64.325	ENSCCAG00000035656	VARS	100	64.934	Cebus_capucinus
ENSMZEG00005018327	vars	100	64.641	ENSCATG00000022394	VARS	100	65.116	Cercocebus_atys
ENSMZEG00005018327	vars	92	63.114	ENSCLAG00000009470	VARS	97	63.369	Chinchilla_lanigera
ENSMZEG00005018327	vars	100	64.404	ENSCSAG00000008784	VARS	100	64.961	Chlorocebus_sabaeus
ENSMZEG00005018327	vars	80	75.052	ENSCPBG00000007943	VARS	96	75.052	Chrysemys_picta_bellii
ENSMZEG00005018327	vars	100	64.483	ENSCANG00000033570	VARS	100	65.116	Colobus_angolensis_palliatus
ENSMZEG00005018327	vars	100	63.773	ENSCGRG00001005686	Vars	100	64.341	Cricetulus_griseus_chok1gshd
ENSMZEG00005018327	vars	92	61.738	ENSCGRG00000013352	Vars	78	62.377	Cricetulus_griseus_crigri
ENSMZEG00005018327	vars	100	82.024	ENSCSEG00000019652	vars	100	82.929	Cynoglossus_semilaevis
ENSMZEG00005018327	vars	97	92.006	ENSCVAG00000022398	vars	100	92.006	Cyprinodon_variegatus
ENSMZEG00005018327	vars	97	84.182	ENSDARG00000044575	vars	100	84.182	Danio_rerio
ENSMZEG00005018327	vars	83	68.618	ENSDORG00000016433	Vars	94	70.427	Dipodomys_ordii
ENSMZEG00005018327	vars	67	74.088	ENSETEG00000003824	VARS	76	74.088	Echinops_telfairi
ENSMZEG00005018327	vars	54	71.404	ENSEBUG00000007086	vars	81	73.217	Eptatretus_burgeri
ENSMZEG00005018327	vars	59	64.472	ENSEBUG00000004637	vars	100	65.253	Eptatretus_burgeri
ENSMZEG00005018327	vars	100	64.957	ENSEASG00005015673	VARS	100	65.426	Equus_asinus_asinus
ENSMZEG00005018327	vars	100	64.905	ENSECAG00000014620	VARS	100	65.143	Equus_caballus
ENSMZEG00005018327	vars	70	71.178	ENSEEUG00000004116	VARS	73	71.178	Erinaceus_europaeus
ENSMZEG00005018327	vars	98	83.744	ENSELUG00000006550	vars	99	83.744	Esox_lucius
ENSMZEG00005018327	vars	100	64.720	ENSFCAG00000004510	VARS	100	64.961	Felis_catus
ENSMZEG00005018327	vars	83	68.687	ENSFDAG00000011401	VARS	100	69.299	Fukomys_damarensis
ENSMZEG00005018327	vars	97	90.204	ENSFHEG00000010672	vars	100	90.204	Fundulus_heteroclitus
ENSMZEG00005018327	vars	97	81.620	ENSGMOG00000014908	vars	100	81.620	Gadus_morhua
ENSMZEG00005018327	vars	97	91.301	ENSGAFG00000021630	vars	100	91.301	Gambusia_affinis
ENSMZEG00005018327	vars	90	90.764	ENSGACG00000009601	vars	100	86.385	Gasterosteus_aculeatus
ENSMZEG00005018327	vars	100	64.562	ENSGGOG00000011364	VARS	100	65.194	Gorilla_gorilla
ENSMZEG00005018327	vars	100	99.621	ENSHBUG00000017151	vars	100	99.621	Haplochromis_burtoni
ENSMZEG00005018327	vars	100	63.744	ENSHGLG00000011646	VARS	100	64.386	Heterocephalus_glaber_female
ENSMZEG00005018327	vars	93	61.629	ENSHGLG00100018062	VARS	99	61.713	Heterocephalus_glaber_male
ENSMZEG00005018327	vars	97	85.670	ENSHCOG00000012198	vars	99	85.670	Hippocampus_comes
ENSMZEG00005018327	vars	97	83.138	ENSIPUG00000005218	vars	100	83.216	Ictalurus_punctatus
ENSMZEG00005018327	vars	100	64.432	ENSSTOG00000013112	VARS	100	64.961	Ictidomys_tridecemlineatus
ENSMZEG00005018327	vars	100	63.715	ENSJJAG00000019749	-	100	64.103	Jaculus_jaculus
ENSMZEG00005018327	vars	100	52.392	ENSJJAG00000015343	-	98	54.739	Jaculus_jaculus
ENSMZEG00005018327	vars	100	84.788	ENSKMAG00000009455	vars	100	87.461	Kryptolebias_marmoratus
ENSMZEG00005018327	vars	100	86.829	ENSLBEG00000010341	vars	100	86.829	Labrus_bergylta
ENSMZEG00005018327	vars	91	66.530	ENSLACG00000015232	VARS	99	66.749	Latimeria_chalumnae
ENSMZEG00005018327	vars	97	75.274	ENSLOCG00000004240	vars	100	75.509	Lepisosteus_oculatus
ENSMZEG00005018327	vars	100	64.060	ENSLAFG00000023090	VARS	100	64.697	Loxodonta_africana
ENSMZEG00005018327	vars	100	64.483	ENSMFAG00000001032	VARS	100	64.961	Macaca_fascicularis
ENSMZEG00005018327	vars	100	64.483	ENSMMUG00000006828	VARS	100	64.961	Macaca_mulatta
ENSMZEG00005018327	vars	100	64.483	ENSMNEG00000042072	VARS	100	64.961	Macaca_nemestrina
ENSMZEG00005018327	vars	100	64.562	ENSMLEG00000039307	VARS	100	65.039	Mandrillus_leucophaeus
ENSMZEG00005018327	vars	97	90.831	ENSMAMG00000003949	vars	100	90.831	Mastacembelus_armatus
ENSMZEG00005018327	vars	100	63.457	ENSMAUG00000006715	Vars	100	64.186	Mesocricetus_auratus
ENSMZEG00005018327	vars	100	64.009	ENSMICG00000003548	VARS	100	64.496	Microcebus_murinus
ENSMZEG00005018327	vars	100	62.937	ENSMOCG00000015404	Vars	100	63.333	Microtus_ochrogaster
ENSMZEG00005018327	vars	100	87.378	ENSMMOG00000015801	vars	100	87.378	Mola_mola
ENSMZEG00005018327	vars	100	64.590	ENSMODG00000015204	-	100	65.194	Monodelphis_domestica
ENSMZEG00005018327	vars	97	90.603	ENSMALG00000022532	vars	99	90.603	Monopterus_albus
ENSMZEG00005018327	vars	100	64.376	MGP_CAROLIEiJ_G0021491	Vars	100	64.961	Mus_caroli
ENSMZEG00005018327	vars	100	64.297	ENSMUSG00000007029	Vars	100	64.806	Mus_musculus
ENSMZEG00005018327	vars	100	64.139	MGP_PahariEiJ_G0020486	Vars	100	64.619	Mus_pahari
ENSMZEG00005018327	vars	100	64.376	MGP_SPRETEiJ_G0022396	Vars	100	64.884	Mus_spretus
ENSMZEG00005018327	vars	100	64.325	ENSMPUG00000010821	VARS	100	64.628	Mustela_putorius_furo
ENSMZEG00005018327	vars	78	67.778	ENSMLUG00000013126	VARS	100	67.879	Myotis_lucifugus
ENSMZEG00005018327	vars	100	64.218	ENSNGAG00000012151	Vars	100	64.546	Nannospalax_galili
ENSMZEG00005018327	vars	97	99.373	ENSNBRG00000020520	vars	100	99.373	Neolamprologus_brichardi
ENSMZEG00005018327	vars	100	64.325	ENSNLEG00000006351	VARS	100	64.961	Nomascus_leucogenys
ENSMZEG00005018327	vars	97	71.779	ENSMEUG00000011378	VARS	100	63.219	Notamacropus_eugenii
ENSMZEG00005018327	vars	100	64.720	ENSOPRG00000003607	VARS	100	65.194	Ochotona_princeps
ENSMZEG00005018327	vars	100	63.341	ENSODEG00000017681	VARS	100	63.608	Octodon_degus
ENSMZEG00005018327	vars	97	97.270	ENSONIG00000013064	vars	100	99.129	Oreochromis_niloticus
ENSMZEG00005018327	vars	75	67.292	ENSOANG00000005400	VARS	98	67.213	Ornithorhynchus_anatinus
ENSMZEG00005018327	vars	100	62.846	ENSOCUG00000022463	VARS	100	63.391	Oryctolagus_cuniculus
ENSMZEG00005018327	vars	97	89.494	ENSORLG00000013063	vars	100	89.650	Oryzias_latipes
ENSMZEG00005018327	vars	97	90.149	ENSORLG00020003504	vars	100	90.227	Oryzias_latipes_hni
ENSMZEG00005018327	vars	97	90.376	ENSORLG00015009001	vars	100	90.376	Oryzias_latipes_hsok
ENSMZEG00005018327	vars	97	90.610	ENSOMEG00000015016	vars	100	90.610	Oryzias_melastigma
ENSMZEG00005018327	vars	100	64.353	ENSOGAG00000007515	VARS	100	64.432	Otolemur_garnettii
ENSMZEG00005018327	vars	100	64.325	ENSPPAG00000034012	VARS	100	64.884	Pan_paniscus
ENSMZEG00005018327	vars	100	64.720	ENSPPRG00000014855	VARS	100	64.961	Panthera_pardus
ENSMZEG00005018327	vars	84	68.908	ENSPTIG00000010462	VARS	94	68.479	Panthera_tigris_altaica
ENSMZEG00005018327	vars	100	64.246	ENSPTRG00000017985	VARS	100	64.806	Pan_troglodytes
ENSMZEG00005018327	vars	100	62.995	ENSPANG00000014565	VARS	100	63.482	Papio_anubis
ENSMZEG00005018327	vars	97	81.401	ENSPKIG00000016304	vars	100	81.401	Paramormyrops_kingsleyae
ENSMZEG00005018327	vars	100	83.535	ENSPMGG00000023909	vars	100	83.621	Periophthalmus_magnuspinnatus
ENSMZEG00005018327	vars	100	64.167	ENSPEMG00000006639	Vars	100	64.651	Peromyscus_maniculatus_bairdii
ENSMZEG00005018327	vars	100	64.325	ENSPCIG00000018553	VARS	100	64.884	Phascolarctos_cinereus
ENSMZEG00005018327	vars	97	91.223	ENSPFOG00000015690	vars	100	91.223	Poecilia_formosa
ENSMZEG00005018327	vars	97	91.066	ENSPLAG00000009590	vars	100	91.066	Poecilia_latipinna
ENSMZEG00005018327	vars	97	91.144	ENSPMEG00000004708	vars	100	91.144	Poecilia_mexicana
ENSMZEG00005018327	vars	100	86.814	ENSPREG00000013264	vars	100	86.814	Poecilia_reticulata
ENSMZEG00005018327	vars	100	63.154	ENSPPYG00000016460	VARS	100	63.158	Pongo_abelii
ENSMZEG00005018327	vars	85	65.771	ENSPCAG00000013565	VARS	86	65.897	Procavia_capensis
ENSMZEG00005018327	vars	100	64.590	ENSPCOG00000010942	VARS	100	64.833	Propithecus_coquereli
ENSMZEG00005018327	vars	100	62.352	ENSPVAG00000012403	VARS	100	62.946	Pteropus_vampyrus
ENSMZEG00005018327	vars	97	99.843	ENSPNYG00000022511	vars	100	99.843	Pundamilia_nyererei
ENSMZEG00005018327	vars	97	83.997	ENSPNAG00000020962	vars	100	84.075	Pygocentrus_nattereri
ENSMZEG00005018327	vars	100	64.088	ENSRNOG00000000867	Vars	100	64.396	Rattus_norvegicus
ENSMZEG00005018327	vars	100	64.483	ENSRBIG00000041669	VARS	100	65.039	Rhinopithecus_bieti
ENSMZEG00005018327	vars	100	64.483	ENSRROG00000045490	VARS	100	65.039	Rhinopithecus_roxellana
ENSMZEG00005018327	vars	100	64.088	ENSSBOG00000035402	VARS	100	64.574	Saimiri_boliviensis_boliviensis
ENSMZEG00005018327	vars	100	63.522	ENSSHAG00000006937	VARS	100	64.390	Sarcophilus_harrisii
ENSMZEG00005018327	vars	97	80.904	ENSSFOG00015014272	vars	100	80.904	Scleropages_formosus
ENSMZEG00005018327	vars	97	89.437	ENSSMAG00000009596	vars	99	89.437	Scophthalmus_maximus
ENSMZEG00005018327	vars	97	92.723	ENSSDUG00000014177	vars	100	92.723	Seriola_dumerili
ENSMZEG00005018327	vars	97	92.488	ENSSLDG00000025316	vars	100	92.488	Seriola_lalandi_dorsalis
ENSMZEG00005018327	vars	97	91.301	ENSSPAG00000017068	vars	100	91.458	Stegastes_partitus
ENSMZEG00005018327	vars	100	64.117	ENSSSCG00000038950	VARS	100	64.446	Sus_scrofa
ENSMZEG00005018327	vars	81	81.683	ENSTRUG00000012307	vars	98	81.387	Takifugu_rubripes
ENSMZEG00005018327	vars	97	86.933	ENSTNIG00000008011	vars	100	86.933	Tetraodon_nigroviridis
ENSMZEG00005018327	vars	100	59.669	ENSTTRG00000014128	VARS	100	59.669	Tursiops_truncatus
ENSMZEG00005018327	vars	100	62.774	ENSUAMG00000010424	VARS	100	63.166	Ursus_americanus
ENSMZEG00005018327	vars	100	59.230	ENSUMAG00000013486	VARS	98	64.253	Ursus_maritimus
ENSMZEG00005018327	vars	100	64.729	ENSVVUG00000021323	VARS	100	64.729	Vulpes_vulpes
ENSMZEG00005018327	vars	100	62.983	ENSXETG00000024076	vars	100	64.424	Xenopus_tropicalis
ENSMZEG00005018327	vars	97	88.715	ENSXCOG00000019172	vars	100	88.715	Xiphophorus_couchianus
ENSMZEG00005018327	vars	97	91.223	ENSXMAG00000010927	vars	100	91.223	Xiphophorus_maculatus