EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005018358 (Gene tree)
Gene ID: 101472733
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2361 bases
Position: chrLG9:10225551-10227911
Accession: 101472733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005024552	GTP_EFTU	PF00009.27	1.8e-53	1	1
ENSMZEP00005024552	MMR_HSR1	PF01926.23	1.9e-07	1	1
ENSMZEP00005024552	GTP_EFTU_D2	PF03144.25	2e-11	1	1
ENSMZEP00005024552	GTP_EFTU_D3	PF03143.17	9.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005025355	-	1814	XM_004551986	ENSMZEP00005024552	456 (aa)	XP_004552043	UPI00032A341C

Gene Model

Click here to download ENSMZEG00005018358's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005018358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005018358	si:dkey-37o8.1	100	91.228	ENSAPOG00000016459	si:dkey-37o8.1	100	91.228	Acanthochromis_polyacanthus
ENSMZEG00005018358	si:dkey-37o8.1	99	91.150	ENSACIG00000020985	si:dkey-37o8.1	84	91.150	Amphilophus_citrinellus
ENSMZEG00005018358	si:dkey-37o8.1	100	92.560	ENSAOCG00000002663	si:dkey-37o8.1	100	92.560	Amphiprion_ocellaris
ENSMZEG00005018358	si:dkey-37o8.1	100	92.341	ENSAPEG00000012670	si:dkey-37o8.1	100	92.341	Amphiprion_percula
ENSMZEG00005018358	si:dkey-37o8.1	93	93.128	ENSATEG00000002217	si:dkey-37o8.1	99	93.128	Anabas_testudineus
ENSMZEG00005018358	si:dkey-37o8.1	100	100.000	ENSACLG00000003519	si:dkey-37o8.1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005018358	si:dkey-37o8.1	100	84.498	ENSAMXG00000002728	si:dkey-37o8.1	100	84.498	Astyanax_mexicanus
ENSMZEG00005018358	si:dkey-37o8.1	96	75.171	ENSCPBG00000020570	-	87	75.171	Chrysemys_picta_bellii
ENSMZEG00005018358	si:dkey-37o8.1	100	85.371	ENSCSEG00000019807	si:dkey-37o8.1	100	84.665	Cynoglossus_semilaevis
ENSMZEG00005018358	si:dkey-37o8.1	98	88.839	ENSCVAG00000009828	si:dkey-37o8.1	98	88.839	Cyprinodon_variegatus
ENSMZEG00005018358	si:dkey-37o8.1	97	82.393	ENSDARG00000071727	si:dkey-37o8.1	92	82.393	Danio_rerio
ENSMZEG00005018358	si:dkey-37o8.1	100	83.843	ENSELUG00000007495	si:dkey-37o8.1	100	83.843	Esox_lucius
ENSMZEG00005018358	si:dkey-37o8.1	98	89.509	ENSFHEG00000017452	si:dkey-37o8.1	98	89.509	Fundulus_heteroclitus
ENSMZEG00005018358	si:dkey-37o8.1	97	79.910	ENSGMOG00000006122	si:dkey-37o8.1	98	79.910	Gadus_morhua
ENSMZEG00005018358	si:dkey-37o8.1	98	82.366	ENSGAFG00000000367	si:dkey-37o8.1	99	82.366	Gambusia_affinis
ENSMZEG00005018358	si:dkey-37o8.1	100	88.403	ENSGACG00000004505	si:dkey-37o8.1	100	88.403	Gasterosteus_aculeatus
ENSMZEG00005018358	si:dkey-37o8.1	96	75.171	ENSGAGG00000007724	-	94	75.171	Gopherus_agassizii
ENSMZEG00005018358	si:dkey-37o8.1	100	99.781	ENSHBUG00000015515	si:dkey-37o8.1	100	99.781	Haplochromis_burtoni
ENSMZEG00005018358	si:dkey-37o8.1	99	80.044	ENSHCOG00000001215	si:dkey-37o8.1	100	80.044	Hippocampus_comes
ENSMZEG00005018358	si:dkey-37o8.1	100	82.314	ENSIPUG00000004067	si:dkey-37o8.1	100	82.314	Ictalurus_punctatus
ENSMZEG00005018358	si:dkey-37o8.1	100	89.497	ENSKMAG00000015910	si:dkey-37o8.1	100	89.497	Kryptolebias_marmoratus
ENSMZEG00005018358	si:dkey-37o8.1	100	91.667	ENSLBEG00000021334	si:dkey-37o8.1	90	91.667	Labrus_bergylta
ENSMZEG00005018358	si:dkey-37o8.1	97	77.201	ENSLACG00000003948	si:dkey-37o8.1	96	77.201	Latimeria_chalumnae
ENSMZEG00005018358	si:dkey-37o8.1	98	81.879	ENSLOCG00000011245	si:dkey-37o8.1	97	81.879	Lepisosteus_oculatus
ENSMZEG00005018358	si:dkey-37o8.1	98	75.223	ENSMAMG00000009907	si:dkey-37o8.1	94	75.223	Mastacembelus_armatus
ENSMZEG00005018358	si:dkey-37o8.1	98	89.755	ENSMMOG00000004111	si:dkey-37o8.1	98	89.755	Mola_mola
ENSMZEG00005018358	si:dkey-37o8.1	96	81.963	ENSMALG00000017152	si:dkey-37o8.1	99	81.963	Monopterus_albus
ENSMZEG00005018358	si:dkey-37o8.1	100	99.561	ENSNBRG00000013552	si:dkey-37o8.1	100	99.561	Neolamprologus_brichardi
ENSMZEG00005018358	si:dkey-37o8.1	100	98.904	ENSONIG00000006165	si:dkey-37o8.1	100	98.904	Oreochromis_niloticus
ENSMZEG00005018358	si:dkey-37o8.1	100	90.789	ENSORLG00000019066	si:dkey-37o8.1	100	90.789	Oryzias_latipes
ENSMZEG00005018358	si:dkey-37o8.1	100	90.789	ENSORLG00020008094	si:dkey-37o8.1	100	90.789	Oryzias_latipes_hni
ENSMZEG00005018358	si:dkey-37o8.1	100	90.570	ENSORLG00015008410	si:dkey-37o8.1	100	90.570	Oryzias_latipes_hsok
ENSMZEG00005018358	si:dkey-37o8.1	100	90.132	ENSOMEG00000001868	si:dkey-37o8.1	100	90.132	Oryzias_melastigma
ENSMZEG00005018358	si:dkey-37o8.1	97	84.199	ENSPKIG00000017246	si:dkey-37o8.1	97	84.199	Paramormyrops_kingsleyae
ENSMZEG00005018358	si:dkey-37o8.1	58	68.382	ENSPSIG00000008080	-	96	68.382	Pelodiscus_sinensis
ENSMZEG00005018358	si:dkey-37o8.1	98	89.732	ENSPFOG00000013173	si:dkey-37o8.1	98	89.732	Poecilia_formosa
ENSMZEG00005018358	si:dkey-37o8.1	100	87.527	ENSPLAG00000010405	si:dkey-37o8.1	100	87.527	Poecilia_latipinna
ENSMZEG00005018358	si:dkey-37o8.1	98	89.955	ENSPMEG00000015233	si:dkey-37o8.1	98	89.955	Poecilia_mexicana
ENSMZEG00005018358	si:dkey-37o8.1	98	89.438	ENSPREG00000006280	si:dkey-37o8.1	98	89.438	Poecilia_reticulata
ENSMZEG00005018358	si:dkey-37o8.1	100	99.342	ENSPNYG00000002059	si:dkey-37o8.1	100	99.342	Pundamilia_nyererei
ENSMZEG00005018358	si:dkey-37o8.1	100	84.061	ENSPNAG00000009990	si:dkey-37o8.1	100	84.061	Pygocentrus_nattereri
ENSMZEG00005018358	si:dkey-37o8.1	98	82.812	ENSSFOG00015019070	si:dkey-37o8.1	98	82.812	Scleropages_formosus
ENSMZEG00005018358	si:dkey-37o8.1	100	92.544	ENSSMAG00000016143	si:dkey-37o8.1	100	92.544	Scophthalmus_maximus
ENSMZEG00005018358	si:dkey-37o8.1	100	91.904	ENSSDUG00000009163	si:dkey-37o8.1	100	91.904	Seriola_dumerili
ENSMZEG00005018358	si:dkey-37o8.1	100	91.685	ENSSLDG00000023761	si:dkey-37o8.1	100	91.685	Seriola_lalandi_dorsalis
ENSMZEG00005018358	si:dkey-37o8.1	99	71.179	ENSSPUG00000007467	-	99	71.179	Sphenodon_punctatus
ENSMZEG00005018358	si:dkey-37o8.1	100	91.904	ENSSPAG00000013856	si:dkey-37o8.1	100	91.904	Stegastes_partitus
ENSMZEG00005018358	si:dkey-37o8.1	99	90.728	ENSTRUG00000009006	si:dkey-37o8.1	100	90.728	Takifugu_rubripes
ENSMZEG00005018358	si:dkey-37o8.1	99	91.209	ENSTNIG00000017138	si:dkey-37o8.1	98	91.209	Tetraodon_nigroviridis
ENSMZEG00005018358	si:dkey-37o8.1	96	75.399	ENSXETG00000017744	42Sp50	96	74.775	Xenopus_tropicalis
ENSMZEG00005018358	si:dkey-37o8.1	98	89.888	ENSXCOG00000012296	si:dkey-37o8.1	98	89.888	Xiphophorus_couchianus
ENSMZEG00005018358	si:dkey-37o8.1	98	89.955	ENSXMAG00000001998	si:dkey-37o8.1	98	89.955	Xiphophorus_maculatus