EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005018489 (Gene tree)
Gene ID: 101473427
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 24313 bases
Position: chrLG17:33610918-33635230
Accession: 101473427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005024748	PIN_4	PF13638.6	4.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005025558	-	2755	XM_004553832	ENSMZEP00005024748	830 (aa)	XP_004553889	UPI000D2FC110

Gene Model

Click here to download ENSMZEG00005018489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005018489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005018489	swt1	67	32.993	ENSG00000116668	SWT1	60	32.993	Homo_sapiens
ENSMZEG00005018489	swt1	98	70.455	ENSAPOG00000014897	-	86	70.455	Acanthochromis_polyacanthus
ENSMZEG00005018489	swt1	68	33.223	ENSAMEG00000013585	SWT1	62	33.444	Ailuropoda_melanoleuca
ENSMZEG00005018489	swt1	98	62.154	ENSAOCG00000013932	swt1	88	66.722	Amphiprion_ocellaris
ENSMZEG00005018489	swt1	98	62.300	ENSAPEG00000009613	-	97	62.300	Amphiprion_percula
ENSMZEG00005018489	swt1	98	66.900	ENSATEG00000018946	swt1	85	65.841	Anabas_testudineus
ENSMZEG00005018489	swt1	67	36.887	ENSAPLG00000008607	SWT1	75	36.860	Anas_platyrhynchos
ENSMZEG00005018489	swt1	67	35.911	ENSACAG00000002276	SWT1	63	35.567	Anolis_carolinensis
ENSMZEG00005018489	swt1	68	32.881	ENSANAG00000027068	SWT1	61	33.220	Aotus_nancymaae
ENSMZEG00005018489	swt1	96	100.000	ENSACLG00000009742	swt1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005018489	swt1	70	46.218	ENSAMXG00000010971	swt1	59	46.701	Astyanax_mexicanus
ENSMZEG00005018489	swt1	68	32.215	ENSCJAG00000005544	SWT1	61	32.550	Callithrix_jacchus
ENSMZEG00005018489	swt1	68	33.445	ENSCAFG00000013543	SWT1	62	33.565	Canis_familiaris
ENSMZEG00005018489	swt1	68	33.445	ENSCAFG00020015648	SWT1	65	33.613	Canis_lupus_dingo
ENSMZEG00005018489	swt1	68	32.941	ENSCHIG00000023511	SWT1	95	32.446	Capra_hircus
ENSMZEG00005018489	swt1	69	32.609	ENSTSYG00000010470	SWT1	62	32.441	Carlito_syrichta
ENSMZEG00005018489	swt1	66	31.966	ENSCPOG00000014251	SWT1	68	31.615	Cavia_porcellus
ENSMZEG00005018489	swt1	68	33.613	ENSCCAG00000033926	SWT1	61	33.950	Cebus_capucinus
ENSMZEG00005018489	swt1	68	33.222	ENSCATG00000042210	SWT1	95	33.556	Cercocebus_atys
ENSMZEG00005018489	swt1	73	32.437	ENSCLAG00000013959	SWT1	67	31.962	Chinchilla_lanigera
ENSMZEG00005018489	swt1	67	32.823	ENSCSAG00000012895	SWT1	60	33.163	Chlorocebus_sabaeus
ENSMZEG00005018489	swt1	68	35.786	ENSCPBG00000015691	SWT1	62	36.000	Chrysemys_picta_bellii
ENSMZEG00005018489	swt1	71	32.588	ENSCANG00000032207	SWT1	95	33.221	Colobus_angolensis_palliatus
ENSMZEG00005018489	swt1	73	32.283	ENSCGRG00001022955	Swt1	69	32.283	Cricetulus_griseus_chok1gshd
ENSMZEG00005018489	swt1	73	32.283	ENSCGRG00000010224	Swt1	67	32.283	Cricetulus_griseus_crigri
ENSMZEG00005018489	swt1	76	58.450	ENSCSEG00000017352	swt1	84	57.722	Cynoglossus_semilaevis
ENSMZEG00005018489	swt1	71	46.116	ENSDARG00000094010	swt1	69	42.446	Danio_rerio
ENSMZEG00005018489	swt1	67	32.247	ENSDNOG00000005254	SWT1	58	33.268	Dasypus_novemcinctus
ENSMZEG00005018489	swt1	68	31.926	ENSDORG00000010531	Swt1	66	32.328	Dipodomys_ordii
ENSMZEG00005018489	swt1	78	30.781	ENSEASG00005005530	SWT1	75	30.928	Equus_asinus_asinus
ENSMZEG00005018489	swt1	67	51.468	ENSELUG00000020565	swt1	56	51.979	Esox_lucius
ENSMZEG00005018489	swt1	68	32.718	ENSFCAG00000011286	SWT1	62	32.550	Felis_catus
ENSMZEG00005018489	swt1	68	34.899	ENSFALG00000003206	SWT1	62	34.899	Ficedula_albicollis
ENSMZEG00005018489	swt1	68	32.609	ENSFDAG00000007569	SWT1	62	32.609	Fukomys_damarensis
ENSMZEG00005018489	swt1	67	35.726	ENSGALG00000034230	SWT1	63	35.726	Gallus_gallus
ENSMZEG00005018489	swt1	86	62.892	ENSGAFG00000007803	-	79	61.672	Gambusia_affinis
ENSMZEG00005018489	swt1	68	35.374	ENSGAGG00000025050	SWT1	96	35.374	Gopherus_agassizii
ENSMZEG00005018489	swt1	65	32.513	ENSGGOG00000041167	-	95	32.513	Gorilla_gorilla
ENSMZEG00005018489	swt1	100	99.398	ENSHBUG00000006188	swt1	100	99.398	Haplochromis_burtoni
ENSMZEG00005018489	swt1	67	34.477	ENSHGLG00000006542	SWT1	64	34.477	Heterocephalus_glaber_female
ENSMZEG00005018489	swt1	67	34.477	ENSHGLG00100014408	SWT1	62	34.477	Heterocephalus_glaber_male
ENSMZEG00005018489	swt1	66	38.863	ENSHCOG00000016930	-	86	39.659	Hippocampus_comes
ENSMZEG00005018489	swt1	68	46.087	ENSIPUG00000009113	-	58	46.087	Ictalurus_punctatus
ENSMZEG00005018489	swt1	68	32.881	ENSSTOG00000010356	SWT1	62	32.881	Ictidomys_tridecemlineatus
ENSMZEG00005018489	swt1	67	33.562	ENSJJAG00000015927	Swt1	64	34.075	Jaculus_jaculus
ENSMZEG00005018489	swt1	100	66.725	ENSKMAG00000012533	swt1	81	66.550	Kryptolebias_marmoratus
ENSMZEG00005018489	swt1	95	65.597	ENSLBEG00000020663	-	84	65.597	Labrus_bergylta
ENSMZEG00005018489	swt1	69	35.630	ENSLACG00000009194	SWT1	81	35.630	Latimeria_chalumnae
ENSMZEG00005018489	swt1	66	43.003	ENSLOCG00000001749	swt1	100	42.531	Lepisosteus_oculatus
ENSMZEG00005018489	swt1	68	31.773	ENSLAFG00000004346	-	95	31.773	Loxodonta_africana
ENSMZEG00005018489	swt1	68	32.888	ENSMFAG00000031793	SWT1	95	33.222	Macaca_fascicularis
ENSMZEG00005018489	swt1	67	32.709	ENSMMUG00000013882	SWT1	94	33.049	Macaca_mulatta
ENSMZEG00005018489	swt1	68	32.888	ENSMNEG00000035502	SWT1	95	33.222	Macaca_nemestrina
ENSMZEG00005018489	swt1	68	33.222	ENSMLEG00000038692	SWT1	95	33.222	Mandrillus_leucophaeus
ENSMZEG00005018489	swt1	67	35.775	ENSMGAG00000000973	SWT1	94	35.094	Meleagris_gallopavo
ENSMZEG00005018489	swt1	68	30.329	ENSMAUG00000007996	Swt1	58	30.503	Mesocricetus_auratus
ENSMZEG00005018489	swt1	71	33.441	ENSMICG00000014975	SWT1	64	33.603	Microcebus_murinus
ENSMZEG00005018489	swt1	68	33.558	ENSMOCG00000009776	Swt1	61	33.390	Microtus_ochrogaster
ENSMZEG00005018489	swt1	67	34.083	ENSMODG00000007472	SWT1	59	34.083	Monodelphis_domestica
ENSMZEG00005018489	swt1	98	67.196	ENSMALG00000019308	swt1	85	66.843	Monopterus_albus
ENSMZEG00005018489	swt1	74	32.919	MGP_CAROLIEiJ_G0014692	Swt1	68	42.442	Mus_caroli
ENSMZEG00005018489	swt1	74	32.298	ENSMUSG00000052748	Swt1	68	41.279	Mus_musculus
ENSMZEG00005018489	swt1	68	33.841	MGP_PahariEiJ_G0027928	Swt1	68	41.860	Mus_pahari
ENSMZEG00005018489	swt1	74	32.453	MGP_SPRETEiJ_G0015499	Swt1	68	41.860	Mus_spretus
ENSMZEG00005018489	swt1	68	34.118	ENSMPUG00000011913	SWT1	62	34.286	Mustela_putorius_furo
ENSMZEG00005018489	swt1	72	31.672	ENSMLUG00000001142	SWT1	64	31.029	Myotis_lucifugus
ENSMZEG00005018489	swt1	67	33.449	ENSNGAG00000021080	Swt1	61	33.220	Nannospalax_galili
ENSMZEG00005018489	swt1	68	32.773	ENSNLEG00000018031	SWT1	61	32.884	Nomascus_leucogenys
ENSMZEG00005018489	swt1	100	88.140	ENSONIG00000009994	swt1	100	88.140	Oreochromis_niloticus
ENSMZEG00005018489	swt1	67	33.959	ENSOANG00000001013	-	70	33.447	Ornithorhynchus_anatinus
ENSMZEG00005018489	swt1	68	33.841	ENSOCUG00000004901	SWT1	63	33.672	Oryctolagus_cuniculus
ENSMZEG00005018489	swt1	93	62.087	ENSORLG00000009682	swt1	84	61.458	Oryzias_latipes
ENSMZEG00005018489	swt1	98	62.738	ENSORLG00020011654	swt1	90	62.111	Oryzias_latipes_hni
ENSMZEG00005018489	swt1	91	61.565	ENSORLG00015007734	swt1	79	60.938	Oryzias_latipes_hsok
ENSMZEG00005018489	swt1	97	54.414	ENSOMEG00000006607	swt1	89	53.768	Oryzias_melastigma
ENSMZEG00005018489	swt1	68	32.881	ENSOGAG00000016195	SWT1	62	32.881	Otolemur_garnettii
ENSMZEG00005018489	swt1	68	32.941	ENSOARG00000004156	SWT1	60	32.941	Ovis_aries
ENSMZEG00005018489	swt1	68	33.054	ENSPPAG00000021400	SWT1	61	32.828	Pan_paniscus
ENSMZEG00005018489	swt1	68	33.221	ENSPPRG00000023754	SWT1	62	33.389	Panthera_pardus
ENSMZEG00005018489	swt1	68	33.221	ENSPTIG00000021889	SWT1	62	33.389	Panthera_tigris_altaica
ENSMZEG00005018489	swt1	68	32.828	ENSPTRG00000001777	SWT1	61	32.828	Pan_troglodytes
ENSMZEG00005018489	swt1	68	33.055	ENSPANG00000005099	SWT1	95	33.389	Papio_anubis
ENSMZEG00005018489	swt1	67	49.033	ENSPKIG00000005979	swt1	58	48.601	Paramormyrops_kingsleyae
ENSMZEG00005018489	swt1	68	35.655	ENSPSIG00000008961	SWT1	61	36.167	Pelodiscus_sinensis
ENSMZEG00005018489	swt1	68	33.390	ENSPEMG00000008208	Swt1	61	33.841	Peromyscus_maniculatus_bairdii
ENSMZEG00005018489	swt1	93	63.194	ENSPFOG00000010988	-	97	50.704	Poecilia_formosa
ENSMZEG00005018489	swt1	93	63.368	ENSPLAG00000022908	-	79	62.284	Poecilia_latipinna
ENSMZEG00005018489	swt1	93	63.194	ENSPMEG00000006943	-	79	62.111	Poecilia_mexicana
ENSMZEG00005018489	swt1	57	64.312	ENSPREG00000014723	-	65	63.736	Poecilia_reticulata
ENSMZEG00005018489	swt1	69	33.056	ENSPPYG00000000415	SWT1	62	33.389	Pongo_abelii
ENSMZEG00005018489	swt1	100	99.518	ENSPNYG00000012934	swt1	100	99.518	Pundamilia_nyererei
ENSMZEG00005018489	swt1	68	46.886	ENSPNAG00000017795	swt1	58	46.967	Pygocentrus_nattereri
ENSMZEG00005018489	swt1	73	32.698	ENSRNOG00000032258	Swt1	79	31.181	Rattus_norvegicus
ENSMZEG00005018489	swt1	68	32.773	ENSRBIG00000040630	SWT1	95	32.773	Rhinopithecus_bieti
ENSMZEG00005018489	swt1	68	32.881	ENSSBOG00000028825	SWT1	62	33.619	Saimiri_boliviensis_boliviensis
ENSMZEG00005018489	swt1	71	33.926	ENSSHAG00000009241	SWT1	64	34.087	Sarcophilus_harrisii
ENSMZEG00005018489	swt1	68	48.021	ENSSFOG00015004895	swt1	56	48.027	Scleropages_formosus
ENSMZEG00005018489	swt1	89	66.025	ENSSMAG00000020761	-	62	66.025	Scophthalmus_maximus
ENSMZEG00005018489	swt1	98	70.261	ENSSDUG00000012345	swt1	85	70.261	Seriola_dumerili
ENSMZEG00005018489	swt1	98	67.550	ENSSLDG00000003821	swt1	88	67.550	Seriola_lalandi_dorsalis
ENSMZEG00005018489	swt1	68	35.500	ENSSPUG00000003899	SWT1	61	35.333	Sphenodon_punctatus
ENSMZEG00005018489	swt1	92	70.087	ENSSPAG00000001030	swt1	85	70.087	Stegastes_partitus
ENSMZEG00005018489	swt1	76	31.908	ENSSSCG00000015569	SWT1	69	32.519	Sus_scrofa
ENSMZEG00005018489	swt1	66	36.568	ENSTGUG00000003718	-	98	36.111	Taeniopygia_guttata
ENSMZEG00005018489	swt1	70	59.191	ENSTRUG00000006420	swt1	63	58.054	Takifugu_rubripes
ENSMZEG00005018489	swt1	69	32.570	ENSTTRG00000005914	SWT1	63	32.733	Tursiops_truncatus
ENSMZEG00005018489	swt1	68	33.833	ENSUAMG00000020937	SWT1	67	34.000	Ursus_americanus
ENSMZEG00005018489	swt1	68	33.833	ENSUMAG00000021918	SWT1	62	34.000	Ursus_maritimus
ENSMZEG00005018489	swt1	61	34.694	ENSVPAG00000011855	SWT1	55	34.694	Vicugna_pacos
ENSMZEG00005018489	swt1	68	33.445	ENSVVUG00000009182	SWT1	64	33.613	Vulpes_vulpes
ENSMZEG00005018489	swt1	93	64.000	ENSXMAG00000023472	-	79	62.957	Xiphophorus_maculatus