EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005018942 (Gene tree)
Gene ID: 101478440
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4412 bases
Position: chrLG17:14026612-14031023
Accession: 101478440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005025381	RtcB	PF01139.17	9.9e-147	1	1
ENSMZEP00005025386	RtcB	PF01139.17	1e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005026203	-	2621	XM_004564869	ENSMZEP00005025381	505 (aa)	XP_004564926	UPI00032995DD
ENSMZET00005026208	-	2374	XM_012922887	ENSMZEP00005025386	508 (aa)	XP_012778341	UPI0003AFF69D

Gene Model

Click here to download ENSMZEG00005018942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005018942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005018942	rtcb	100	93.267	ENSG00000100220	RTCB	100	93.267	Homo_sapiens
ENSMZEG00005018942	rtcb	100	96.436	ENSAPOG00000006040	rtcb	100	96.436	Acanthochromis_polyacanthus
ENSMZEG00005018942	rtcb	100	93.267	ENSAMEG00000016152	RTCB	100	93.267	Ailuropoda_melanoleuca
ENSMZEG00005018942	rtcb	100	91.683	ENSACIG00000009083	rtcb	100	91.683	Amphilophus_citrinellus
ENSMZEG00005018942	rtcb	100	96.436	ENSAOCG00000005662	rtcb	100	97.174	Amphiprion_ocellaris
ENSMZEG00005018942	rtcb	96	91.581	ENSAPEG00000024653	rtcb	100	91.581	Amphiprion_percula
ENSMZEG00005018942	rtcb	100	96.436	ENSAPEG00000024701	rtcb	100	96.436	Amphiprion_percula
ENSMZEG00005018942	rtcb	100	95.644	ENSATEG00000000618	rtcb	100	95.644	Anabas_testudineus
ENSMZEG00005018942	rtcb	100	90.366	ENSACAG00000014817	RTCB	100	90.366	Anolis_carolinensis
ENSMZEG00005018942	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSMZEG00005018942	rtcb	100	79.406	ENSANAG00000018191	-	91	79.406	Aotus_nancymaae
ENSMZEG00005018942	rtcb	100	100.000	ENSACLG00000008367	rtcb	100	100.000	Astatotilapia_calliptera
ENSMZEG00005018942	rtcb	100	94.851	ENSAMXG00000042320	rtcb	100	94.851	Astyanax_mexicanus
ENSMZEG00005018942	rtcb	100	93.663	ENSBTAG00000011070	RTCB	100	93.663	Bos_taurus
ENSMZEG00005018942	rtcb	100	75.248	WBGene00008877	rtcb-1	100	75.248	Caenorhabditis_elegans
ENSMZEG00005018942	rtcb	100	93.069	ENSCJAG00000006128	RTCB	100	93.069	Callithrix_jacchus
ENSMZEG00005018942	rtcb	100	93.267	ENSCAFG00000001785	RTCB	100	93.267	Canis_familiaris
ENSMZEG00005018942	rtcb	100	89.109	ENSCAFG00000010789	-	100	89.109	Canis_familiaris
ENSMZEG00005018942	rtcb	87	89.091	ENSCAFG00020018953	-	99	89.091	Canis_lupus_dingo
ENSMZEG00005018942	rtcb	100	93.267	ENSCAFG00020004890	-	100	93.267	Canis_lupus_dingo
ENSMZEG00005018942	rtcb	100	93.465	ENSCHIG00000027009	-	100	93.465	Capra_hircus
ENSMZEG00005018942	rtcb	100	93.267	ENSTSYG00000012320	RTCB	100	93.267	Carlito_syrichta
ENSMZEG00005018942	rtcb	94	93.291	ENSCAPG00000011647	RTCB	96	93.882	Cavia_aperea
ENSMZEG00005018942	rtcb	100	93.069	ENSCCAG00000000618	RTCB	100	93.069	Cebus_capucinus
ENSMZEG00005018942	rtcb	100	93.267	ENSCATG00000033424	RTCB	100	93.267	Cercocebus_atys
ENSMZEG00005018942	rtcb	100	93.069	ENSCLAG00000007997	RTCB	100	93.069	Chinchilla_lanigera
ENSMZEG00005018942	rtcb	100	93.069	ENSCSAG00000008351	RTCB	100	93.069	Chlorocebus_sabaeus
ENSMZEG00005018942	rtcb	100	79.406	ENSCHOG00000009123	RTCB	100	79.406	Choloepus_hoffmanni
ENSMZEG00005018942	rtcb	100	92.871	ENSCPBG00000023184	RTCB	100	92.871	Chrysemys_picta_bellii
ENSMZEG00005018942	rtcb	100	82.574	ENSCING00000003830	-	100	82.574	Ciona_intestinalis
ENSMZEG00005018942	rtcb	100	82.772	ENSCSAVG00000008124	-	99	82.772	Ciona_savignyi
ENSMZEG00005018942	rtcb	100	89.703	ENSCANG00000001891	RTCB	100	89.703	Colobus_angolensis_palliatus
ENSMZEG00005018942	rtcb	100	93.267	ENSCGRG00001011173	Rtcb	100	93.267	Cricetulus_griseus_chok1gshd
ENSMZEG00005018942	rtcb	93	93.631	ENSCGRG00000009587	-	96	93.631	Cricetulus_griseus_crigri
ENSMZEG00005018942	rtcb	100	94.653	ENSCSEG00000003986	rtcb	100	94.653	Cynoglossus_semilaevis
ENSMZEG00005018942	rtcb	82	94.471	ENSCVAG00000000569	rtcb	95	94.471	Cyprinodon_variegatus
ENSMZEG00005018942	rtcb	100	95.050	ENSDARG00000101047	rtcb	100	95.050	Danio_rerio
ENSMZEG00005018942	rtcb	80	89.189	ENSDNOG00000012425	RTCB	99	89.189	Dasypus_novemcinctus
ENSMZEG00005018942	rtcb	100	93.267	ENSDORG00000010855	Rtcb	100	93.267	Dipodomys_ordii
ENSMZEG00005018942	rtcb	99	85.089	FBgn0032781	RtcB	99	85.089	Drosophila_melanogaster
ENSMZEG00005018942	rtcb	100	87.525	ENSETEG00000001988	RTCB	100	87.525	Echinops_telfairi
ENSMZEG00005018942	rtcb	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSMZEG00005018942	rtcb	100	93.465	ENSEASG00005019059	RTCB	100	93.465	Equus_asinus_asinus
ENSMZEG00005018942	rtcb	100	93.465	ENSECAG00000023998	RTCB	100	93.465	Equus_caballus
ENSMZEG00005018942	rtcb	89	84.787	ENSEEUG00000006251	RTCB	100	84.787	Erinaceus_europaeus
ENSMZEG00005018942	rtcb	100	82.420	ENSELUG00000009275	rtcb	100	82.420	Esox_lucius
ENSMZEG00005018942	rtcb	100	93.267	ENSFCAG00000026480	RTCB	100	93.267	Felis_catus
ENSMZEG00005018942	rtcb	100	93.465	ENSFALG00000013334	RTCB	100	93.465	Ficedula_albicollis
ENSMZEG00005018942	rtcb	100	93.069	ENSFDAG00000018150	RTCB	100	93.069	Fukomys_damarensis
ENSMZEG00005018942	rtcb	100	95.842	ENSFHEG00000009595	rtcb	100	95.842	Fundulus_heteroclitus
ENSMZEG00005018942	rtcb	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSMZEG00005018942	rtcb	100	92.871	ENSGALG00000012611	RTCB	100	92.871	Gallus_gallus
ENSMZEG00005018942	rtcb	100	96.238	ENSGAFG00000004198	rtcb	100	96.238	Gambusia_affinis
ENSMZEG00005018942	rtcb	100	94.059	ENSGACG00000000586	rtcb	100	94.059	Gasterosteus_aculeatus
ENSMZEG00005018942	rtcb	93	92.340	ENSGAGG00000019133	RTCB	98	92.340	Gopherus_agassizii
ENSMZEG00005018942	rtcb	100	93.267	ENSGGOG00000011402	RTCB	100	93.267	Gorilla_gorilla
ENSMZEG00005018942	rtcb	100	100.000	ENSHBUG00000020571	rtcb	100	100.000	Haplochromis_burtoni
ENSMZEG00005018942	rtcb	100	93.069	ENSHGLG00000004492	RTCB	100	93.069	Heterocephalus_glaber_female
ENSMZEG00005018942	rtcb	93	66.949	ENSHGLG00000001066	-	99	66.949	Heterocephalus_glaber_female
ENSMZEG00005018942	rtcb	100	93.069	ENSHGLG00100008965	RTCB	100	93.069	Heterocephalus_glaber_male
ENSMZEG00005018942	rtcb	100	92.505	ENSHCOG00000006450	rtcb	100	92.505	Hippocampus_comes
ENSMZEG00005018942	rtcb	100	95.248	ENSIPUG00000015443	rtcb	100	95.248	Ictalurus_punctatus
ENSMZEG00005018942	rtcb	100	92.871	ENSSTOG00000003878	RTCB	100	92.871	Ictidomys_tridecemlineatus
ENSMZEG00005018942	rtcb	100	93.663	ENSJJAG00000010667	Rtcb	100	93.663	Jaculus_jaculus
ENSMZEG00005018942	rtcb	100	94.851	ENSKMAG00000013178	rtcb	100	94.851	Kryptolebias_marmoratus
ENSMZEG00005018942	rtcb	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSMZEG00005018942	rtcb	100	94.851	ENSLBEG00000010566	RTCB	100	94.851	Labrus_bergylta
ENSMZEG00005018942	rtcb	100	93.069	ENSLACG00000013033	RTCB	100	93.069	Latimeria_chalumnae
ENSMZEG00005018942	rtcb	100	94.257	ENSLOCG00000016515	rtcb	99	94.257	Lepisosteus_oculatus
ENSMZEG00005018942	rtcb	100	92.673	ENSLAFG00000002082	RTCB	100	92.673	Loxodonta_africana
ENSMZEG00005018942	rtcb	100	93.069	ENSMFAG00000034419	RTCB	100	93.069	Macaca_fascicularis
ENSMZEG00005018942	rtcb	100	93.069	ENSMMUG00000006720	RTCB	100	93.069	Macaca_mulatta
ENSMZEG00005018942	rtcb	100	93.069	ENSMNEG00000040669	RTCB	100	93.069	Macaca_nemestrina
ENSMZEG00005018942	rtcb	100	93.267	ENSMLEG00000040505	RTCB	100	93.267	Mandrillus_leucophaeus
ENSMZEG00005018942	rtcb	100	95.842	ENSMAMG00000020676	rtcb	100	95.842	Mastacembelus_armatus
ENSMZEG00005018942	rtcb	100	92.505	ENSMGAG00000012805	RTCB	100	92.505	Meleagris_gallopavo
ENSMZEG00005018942	rtcb	60	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSMZEG00005018942	rtcb	100	74.455	ENSMICG00000036677	-	100	74.455	Microcebus_murinus
ENSMZEG00005018942	rtcb	100	93.069	ENSMICG00000013303	-	100	93.069	Microcebus_murinus
ENSMZEG00005018942	rtcb	100	93.663	ENSMOCG00000002440	Rtcb	100	93.663	Microtus_ochrogaster
ENSMZEG00005018942	rtcb	100	96.436	ENSMMOG00000005987	rtcb	100	96.436	Mola_mola
ENSMZEG00005018942	rtcb	100	93.267	ENSMODG00000001414	RTCB	100	93.267	Monodelphis_domestica
ENSMZEG00005018942	rtcb	100	94.851	ENSMALG00000007603	rtcb	100	94.851	Monopterus_albus
ENSMZEG00005018942	rtcb	100	93.267	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.267	Mus_caroli
ENSMZEG00005018942	rtcb	100	93.267	ENSMUSG00000001783	Rtcb	100	93.267	Mus_musculus
ENSMZEG00005018942	rtcb	100	93.267	MGP_PahariEiJ_G0031396	Rtcb	100	93.267	Mus_pahari
ENSMZEG00005018942	rtcb	100	93.267	MGP_SPRETEiJ_G0016507	Rtcb	100	93.267	Mus_spretus
ENSMZEG00005018942	rtcb	100	93.267	ENSMPUG00000012285	RTCB	100	93.267	Mustela_putorius_furo
ENSMZEG00005018942	rtcb	100	90.335	ENSMLUG00000007803	RTCB	100	90.335	Myotis_lucifugus
ENSMZEG00005018942	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSMZEG00005018942	rtcb	100	99.604	ENSNBRG00000017202	rtcb	100	99.604	Neolamprologus_brichardi
ENSMZEG00005018942	rtcb	100	93.267	ENSNLEG00000004960	RTCB	100	93.267	Nomascus_leucogenys
ENSMZEG00005018942	rtcb	88	98.214	ENSMEUG00000007809	-	88	98.214	Notamacropus_eugenii
ENSMZEG00005018942	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSMZEG00005018942	rtcb	100	62.178	ENSODEG00000005042	-	100	62.178	Octodon_degus
ENSMZEG00005018942	rtcb	82	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSMZEG00005018942	rtcb	100	98.218	ENSONIG00000007474	rtcb	100	98.218	Oreochromis_niloticus
ENSMZEG00005018942	rtcb	100	92.871	ENSOANG00000005524	RTCB	100	92.871	Ornithorhynchus_anatinus
ENSMZEG00005018942	rtcb	93	92.766	ENSOCUG00000008270	RTCB	96	92.766	Oryctolagus_cuniculus
ENSMZEG00005018942	rtcb	100	96.040	ENSORLG00000020093	rtcb	100	96.040	Oryzias_latipes
ENSMZEG00005018942	rtcb	100	95.644	ENSORLG00020003706	rtcb	100	95.644	Oryzias_latipes_hni
ENSMZEG00005018942	rtcb	100	95.842	ENSORLG00015002968	rtcb	100	95.842	Oryzias_latipes_hsok
ENSMZEG00005018942	rtcb	100	95.446	ENSOMEG00000021278	rtcb	100	95.446	Oryzias_melastigma
ENSMZEG00005018942	rtcb	100	92.475	ENSOGAG00000001425	RTCB	100	92.475	Otolemur_garnettii
ENSMZEG00005018942	rtcb	100	93.465	ENSOARG00000018008	RTCB	100	93.465	Ovis_aries
ENSMZEG00005018942	rtcb	100	93.267	ENSPPAG00000028667	RTCB	100	93.267	Pan_paniscus
ENSMZEG00005018942	rtcb	100	93.267	ENSPPRG00000004038	RTCB	100	93.267	Panthera_pardus
ENSMZEG00005018942	rtcb	94	89.263	ENSPTIG00000020499	RTCB	98	89.937	Panthera_tigris_altaica
ENSMZEG00005018942	rtcb	100	93.267	ENSPTRG00000014287	RTCB	100	93.267	Pan_troglodytes
ENSMZEG00005018942	rtcb	100	93.069	ENSPANG00000016035	RTCB	100	93.069	Papio_anubis
ENSMZEG00005018942	rtcb	100	94.653	ENSPKIG00000001881	rtcb	100	94.653	Paramormyrops_kingsleyae
ENSMZEG00005018942	rtcb	91	93.478	ENSPSIG00000011690	RTCB	100	93.478	Pelodiscus_sinensis
ENSMZEG00005018942	rtcb	100	95.248	ENSPMGG00000016672	rtcb	100	95.248	Periophthalmus_magnuspinnatus
ENSMZEG00005018942	rtcb	100	93.267	ENSPEMG00000019548	Rtcb	100	93.267	Peromyscus_maniculatus_bairdii
ENSMZEG00005018942	rtcb	100	91.089	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSMZEG00005018942	rtcb	100	93.267	ENSPCIG00000009467	RTCB	100	93.267	Phascolarctos_cinereus
ENSMZEG00005018942	rtcb	100	96.436	ENSPFOG00000003058	rtcb	100	96.436	Poecilia_formosa
ENSMZEG00005018942	rtcb	100	96.238	ENSPLAG00000017663	rtcb	100	96.238	Poecilia_latipinna
ENSMZEG00005018942	rtcb	100	96.436	ENSPMEG00000006227	rtcb	100	96.436	Poecilia_mexicana
ENSMZEG00005018942	rtcb	100	96.040	ENSPREG00000018467	rtcb	100	96.040	Poecilia_reticulata
ENSMZEG00005018942	rtcb	100	93.267	ENSPPYG00000011752	RTCB	100	93.267	Pongo_abelii
ENSMZEG00005018942	rtcb	93	76.695	ENSPCAG00000013641	RTCB	100	76.695	Procavia_capensis
ENSMZEG00005018942	rtcb	100	93.267	ENSPCOG00000017243	RTCB	100	93.267	Propithecus_coquereli
ENSMZEG00005018942	rtcb	93	92.340	ENSPVAG00000002380	RTCB	100	92.340	Pteropus_vampyrus
ENSMZEG00005018942	rtcb	100	100.000	ENSPNYG00000022760	rtcb	100	100.000	Pundamilia_nyererei
ENSMZEG00005018942	rtcb	100	95.050	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSMZEG00005018942	rtcb	100	93.267	ENSRNOG00000004813	Rtcb	100	93.267	Rattus_norvegicus
ENSMZEG00005018942	rtcb	100	85.178	ENSRBIG00000042090	RTCB	100	85.178	Rhinopithecus_bieti
ENSMZEG00005018942	rtcb	100	88.713	ENSSBOG00000020085	-	100	88.713	Saimiri_boliviensis_boliviensis
ENSMZEG00005018942	rtcb	94	93.882	ENSSHAG00000016277	RTCB	100	93.882	Sarcophilus_harrisii
ENSMZEG00005018942	rtcb	100	94.851	ENSSFOG00015000763	rtcb	100	94.851	Scleropages_formosus
ENSMZEG00005018942	rtcb	100	93.663	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSMZEG00005018942	rtcb	100	91.881	ENSSMAG00000005096	rtcb	100	91.881	Scophthalmus_maximus
ENSMZEG00005018942	rtcb	100	94.059	ENSSDUG00000012605	rtcb	100	94.059	Seriola_dumerili
ENSMZEG00005018942	rtcb	100	94.257	ENSSLDG00000019458	rtcb	100	94.257	Seriola_lalandi_dorsalis
ENSMZEG00005018942	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSMZEG00005018942	rtcb	100	92.277	ENSSPUG00000012814	RTCB	100	92.277	Sphenodon_punctatus
ENSMZEG00005018942	rtcb	100	96.436	ENSSPAG00000004623	rtcb	100	96.436	Stegastes_partitus
ENSMZEG00005018942	rtcb	100	93.267	ENSSSCG00000000158	RTCB	100	93.267	Sus_scrofa
ENSMZEG00005018942	rtcb	100	93.465	ENSTGUG00000010947	RTCB	99	93.465	Taeniopygia_guttata
ENSMZEG00005018942	rtcb	91	96.522	ENSTRUG00000009880	rtcb	100	96.522	Takifugu_rubripes
ENSMZEG00005018942	rtcb	100	94.455	ENSTNIG00000002484	rtcb	100	94.455	Tetraodon_nigroviridis
ENSMZEG00005018942	rtcb	100	80.396	ENSTBEG00000004418	RTCB	100	80.396	Tupaia_belangeri
ENSMZEG00005018942	rtcb	93	92.128	ENSTTRG00000006417	RTCB	100	92.128	Tursiops_truncatus
ENSMZEG00005018942	rtcb	100	93.267	ENSUAMG00000022792	RTCB	100	93.267	Ursus_americanus
ENSMZEG00005018942	rtcb	100	93.267	ENSUMAG00000017225	RTCB	100	93.267	Ursus_maritimus
ENSMZEG00005018942	rtcb	100	93.069	ENSVPAG00000005375	RTCB	100	93.069	Vicugna_pacos
ENSMZEG00005018942	rtcb	100	93.267	ENSVVUG00000023408	RTCB	100	93.857	Vulpes_vulpes
ENSMZEG00005018942	rtcb	100	92.475	ENSXETG00000011523	rtcb	100	92.475	Xenopus_tropicalis
ENSMZEG00005018942	rtcb	100	96.040	ENSXMAG00000002855	rtcb	100	96.040	Xiphophorus_maculatus