EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005019002 (Gene tree)
Gene ID: 101468577
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 10279 bases
Position: chrLG4:19720651-19730929
Accession: 101468577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005025478	RRM_1	PF00076.22	3.8e-29	1	2
ENSMZEP00005025478	RRM_1	PF00076.22	3.8e-29	2	2
ENSMZEP00005025462	RRM_1	PF00076.22	4.5e-29	1	2
ENSMZEP00005025462	RRM_1	PF00076.22	4.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005026304	-	2103	-	ENSMZEP00005025478	700 (aa)	-	-
ENSMZET00005026288	-	4070	XM_004552145	ENSMZEP00005025462	729 (aa)	XP_004552202	UPI000C2514C9

Gene Model

Click here to download ENSMZEG00005019002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005019002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005019002	raver1	91	52.427	ENSG00000161847	RAVER1	72	85.417	Homo_sapiens
ENSMZEG00005019002	raver1	98	87.465	ENSAPOG00000017267	raver1	92	87.260	Acanthochromis_polyacanthus
ENSMZEG00005019002	raver1	75	85.417	ENSAMEG00000011738	RAVER1	70	85.417	Ailuropoda_melanoleuca
ENSMZEG00005019002	raver1	98	88.703	ENSAOCG00000005128	raver1	97	88.477	Amphiprion_ocellaris
ENSMZEG00005019002	raver1	98	88.643	ENSAPEG00000010854	raver1	100	88.420	Amphiprion_percula
ENSMZEG00005019002	raver1	98	84.284	ENSATEG00000021004	raver1	100	83.973	Anabas_testudineus
ENSMZEG00005019002	raver1	67	55.800	ENSACAG00000008386	-	74	55.945	Anolis_carolinensis
ENSMZEG00005019002	raver1	75	85.417	ENSANAG00000028226	RAVER1	70	85.417	Aotus_nancymaae
ENSMZEG00005019002	raver1	100	99.863	ENSACLG00000018492	raver1	100	99.857	Astatotilapia_calliptera
ENSMZEG00005019002	raver1	98	66.712	ENSAMXG00000005132	raver1	100	65.422	Astyanax_mexicanus
ENSMZEG00005019002	raver1	92	52.733	ENSBTAG00000015721	RAVER1	91	60.494	Bos_taurus
ENSMZEG00005019002	raver1	75	85.417	ENSCJAG00000005671	RAVER1	70	85.417	Callithrix_jacchus
ENSMZEG00005019002	raver1	91	51.617	ENSCAFG00000017861	RAVER1	94	51.494	Canis_familiaris
ENSMZEG00005019002	raver1	91	51.617	ENSCAFG00020024449	RAVER1	96	51.351	Canis_lupus_dingo
ENSMZEG00005019002	raver1	91	51.189	ENSCHIG00000006718	RAVER1	73	61.905	Capra_hircus
ENSMZEG00005019002	raver1	51	68.785	ENSTSYG00000027107	RAVER1	100	50.698	Carlito_syrichta
ENSMZEG00005019002	raver1	76	85.417	ENSCAPG00000002269	RAVER1	74	85.417	Cavia_aperea
ENSMZEG00005019002	raver1	75	85.417	ENSCPOG00000001008	RAVER1	73	85.417	Cavia_porcellus
ENSMZEG00005019002	raver1	68	61.317	ENSCCAG00000031723	RAVER1	65	60.986	Cebus_capucinus
ENSMZEG00005019002	raver1	75	85.417	ENSCATG00000043863	RAVER1	70	85.417	Cercocebus_atys
ENSMZEG00005019002	raver1	75	85.417	ENSCSAG00000007317	RAVER1	60	85.417	Chlorocebus_sabaeus
ENSMZEG00005019002	raver1	91	52.203	ENSCPBG00000005349	-	96	51.812	Chrysemys_picta_bellii
ENSMZEG00005019002	raver1	75	85.417	ENSCANG00000008337	RAVER1	70	85.417	Colobus_angolensis_palliatus
ENSMZEG00005019002	raver1	76	87.500	ENSCGRG00001013260	-	74	87.500	Cricetulus_griseus_chok1gshd
ENSMZEG00005019002	raver1	76	87.500	ENSCGRG00000015138	-	74	87.500	Cricetulus_griseus_crigri
ENSMZEG00005019002	raver1	98	76.406	ENSCSEG00000021092	raver1	100	76.113	Cynoglossus_semilaevis
ENSMZEG00005019002	raver1	100	79.372	ENSCVAG00000013971	raver1	100	79.372	Cyprinodon_variegatus
ENSMZEG00005019002	raver1	98	68.508	ENSDARG00000052617	raver1	100	65.986	Danio_rerio
ENSMZEG00005019002	raver1	52	83.333	ENSDNOG00000035742	-	52	83.333	Dasypus_novemcinctus
ENSMZEG00005019002	raver1	69	53.452	ENSDORG00000010106	-	96	47.099	Dipodomys_ordii
ENSMZEG00005019002	raver1	51	38.847	ENSEBUG00000003030	RAVER1	53	38.384	Eptatretus_burgeri
ENSMZEG00005019002	raver1	53	69.415	ENSEASG00005010544	-	68	68.966	Equus_asinus_asinus
ENSMZEG00005019002	raver1	91	59.635	ENSECAG00000024966	RAVER1	74	62.025	Equus_caballus
ENSMZEG00005019002	raver1	100	74.457	ENSELUG00000023287	raver1	100	73.469	Esox_lucius
ENSMZEG00005019002	raver1	63	85.417	ENSFCAG00000009435	RAVER1	70	85.417	Felis_catus
ENSMZEG00005019002	raver1	91	51.153	ENSFDAG00000015113	RAVER1	97	50.204	Fukomys_damarensis
ENSMZEG00005019002	raver1	93	70.697	ENSGMOG00000003649	raver1	78	93.750	Gadus_morhua
ENSMZEG00005019002	raver1	68	40.947	ENSGALG00000050608	-	51	40.947	Gallus_gallus
ENSMZEG00005019002	raver1	100	79.647	ENSGAFG00000015944	raver1	100	79.647	Gambusia_affinis
ENSMZEG00005019002	raver1	95	72.653	ENSGACG00000013818	raver1	100	74.422	Gasterosteus_aculeatus
ENSMZEG00005019002	raver1	80	68.633	ENSGAGG00000011748	-	96	68.633	Gopherus_agassizii
ENSMZEG00005019002	raver1	91	52.288	ENSGGOG00000006015	RAVER1	70	85.417	Gorilla_gorilla
ENSMZEG00005019002	raver1	100	98.864	ENSHBUG00000021210	raver1	100	98.864	Haplochromis_burtoni
ENSMZEG00005019002	raver1	91	50.612	ENSHGLG00000015460	RAVER1	73	85.417	Heterocephalus_glaber_female
ENSMZEG00005019002	raver1	91	50.612	ENSHGLG00100000812	RAVER1	73	85.417	Heterocephalus_glaber_male
ENSMZEG00005019002	raver1	100	76.327	ENSHCOG00000000449	raver1	98	76.294	Hippocampus_comes
ENSMZEG00005019002	raver1	98	68.326	ENSIPUG00000013153	raver1	100	67.755	Ictalurus_punctatus
ENSMZEG00005019002	raver1	91	51.857	ENSSTOG00000003241	RAVER1	66	60.861	Ictidomys_tridecemlineatus
ENSMZEG00005019002	raver1	91	51.078	ENSJJAG00000018219	-	72	87.500	Jaculus_jaculus
ENSMZEG00005019002	raver1	100	83.265	ENSKMAG00000017355	raver1	100	83.265	Kryptolebias_marmoratus
ENSMZEG00005019002	raver1	92	83.876	ENSLBEG00000008268	raver1	96	83.284	Labrus_bergylta
ENSMZEG00005019002	raver1	68	91.111	ENSLACG00000005809	-	74	91.111	Latimeria_chalumnae
ENSMZEG00005019002	raver1	98	61.578	ENSLOCG00000007500	raver1	100	61.588	Lepisosteus_oculatus
ENSMZEG00005019002	raver1	94	50.467	ENSLAFG00000003664	-	82	52.865	Loxodonta_africana
ENSMZEG00005019002	raver1	68	60.905	ENSMFAG00000037977	RAVER1	94	51.374	Macaca_fascicularis
ENSMZEG00005019002	raver1	75	85.417	ENSMMUG00000014897	RAVER1	70	85.417	Macaca_mulatta
ENSMZEG00005019002	raver1	75	85.417	ENSMNEG00000028390	RAVER1	70	85.417	Macaca_nemestrina
ENSMZEG00005019002	raver1	75	85.417	ENSMLEG00000041959	RAVER1	70	85.417	Mandrillus_leucophaeus
ENSMZEG00005019002	raver1	98	83.126	ENSMAMG00000012059	raver1	100	82.970	Mastacembelus_armatus
ENSMZEG00005019002	raver1	76	87.500	ENSMAUG00000017948	-	74	87.500	Mesocricetus_auratus
ENSMZEG00005019002	raver1	91	52.647	ENSMICG00000010326	RAVER1	96	51.739	Microcebus_murinus
ENSMZEG00005019002	raver1	76	87.500	ENSMOCG00000015553	-	73	87.500	Microtus_ochrogaster
ENSMZEG00005019002	raver1	98	83.679	ENSMMOG00000012093	raver1	100	83.106	Mola_mola
ENSMZEG00005019002	raver1	88	51.245	ENSMODG00000005584	-	85	51.114	Monodelphis_domestica
ENSMZEG00005019002	raver1	100	81.361	ENSMALG00000016569	raver1	100	81.361	Monopterus_albus
ENSMZEG00005019002	raver1	77	87.500	MGP_CAROLIEiJ_G0031860	-	74	87.500	Mus_caroli
ENSMZEG00005019002	raver1	76	87.500	ENSMUSG00000010205	Raver1	74	87.500	Mus_musculus
ENSMZEG00005019002	raver1	76	87.500	MGP_PahariEiJ_G0014726	-	74	87.500	Mus_pahari
ENSMZEG00005019002	raver1	76	87.500	MGP_SPRETEiJ_G0032984	-	74	87.500	Mus_spretus
ENSMZEG00005019002	raver1	74	85.417	ENSMPUG00000006712	RAVER1	70	85.417	Mustela_putorius_furo
ENSMZEG00005019002	raver1	91	51.199	ENSMLUG00000012328	RAVER1	96	51.127	Myotis_lucifugus
ENSMZEG00005019002	raver1	56	65.063	ENSNGAG00000001260	-	96	48.493	Nannospalax_galili
ENSMZEG00005019002	raver1	100	89.452	ENSNBRG00000010139	raver1	100	88.767	Neolamprologus_brichardi
ENSMZEG00005019002	raver1	75	85.417	ENSNLEG00000012181	RAVER1	70	85.417	Nomascus_leucogenys
ENSMZEG00005019002	raver1	70	91.667	ENSMEUG00000003281	-	76	91.667	Notamacropus_eugenii
ENSMZEG00005019002	raver1	64	85.417	ENSODEG00000016260	RAVER1	68	85.417	Octodon_degus
ENSMZEG00005019002	raver1	92	93.363	ENSONIG00000001559	raver1	99	94.805	Oreochromis_niloticus
ENSMZEG00005019002	raver1	75	85.417	ENSOCUG00000020918	RAVER1	73	85.417	Oryctolagus_cuniculus
ENSMZEG00005019002	raver1	100	80.355	ENSORLG00000005458	raver1	100	80.355	Oryzias_latipes
ENSMZEG00005019002	raver1	100	80.218	ENSORLG00020004392	raver1	100	80.218	Oryzias_latipes_hni
ENSMZEG00005019002	raver1	100	80.764	ENSORLG00015017222	raver1	100	80.764	Oryzias_latipes_hsok
ENSMZEG00005019002	raver1	100	76.136	ENSOMEG00000023956	raver1	100	93.878	Oryzias_melastigma
ENSMZEG00005019002	raver1	75	85.417	ENSOGAG00000011071	RAVER1	71	85.417	Otolemur_garnettii
ENSMZEG00005019002	raver1	75	85.417	ENSOARG00000015886	RAVER1	70	85.417	Ovis_aries
ENSMZEG00005019002	raver1	91	52.427	ENSPPAG00000002611	RAVER1	70	85.417	Pan_paniscus
ENSMZEG00005019002	raver1	75	85.417	ENSPPRG00000009912	RAVER1	70	85.417	Panthera_pardus
ENSMZEG00005019002	raver1	91	52.427	ENSPTRG00000010466	RAVER1	70	85.417	Pan_troglodytes
ENSMZEG00005019002	raver1	75	85.417	ENSPANG00000004122	RAVER1	69	85.417	Papio_anubis
ENSMZEG00005019002	raver1	76	87.500	ENSPEMG00000016411	-	74	87.500	Peromyscus_maniculatus_bairdii
ENSMZEG00005019002	raver1	91	54.269	ENSPCIG00000018695	-	80	91.667	Phascolarctos_cinereus
ENSMZEG00005019002	raver1	100	77.170	ENSPFOG00000007016	raver1	100	78.772	Poecilia_formosa
ENSMZEG00005019002	raver1	95	78.632	ENSPLAG00000020793	raver1	99	78.490	Poecilia_latipinna
ENSMZEG00005019002	raver1	100	80.461	ENSPMEG00000011220	raver1	100	80.461	Poecilia_mexicana
ENSMZEG00005019002	raver1	100	78.390	ENSPREG00000006864	raver1	100	77.260	Poecilia_reticulata
ENSMZEG00005019002	raver1	91	51.867	ENSPPYG00000010514	RAVER1	80	51.524	Pongo_abelii
ENSMZEG00005019002	raver1	75	85.417	ENSPCOG00000026605	RAVER1	70	85.417	Propithecus_coquereli
ENSMZEG00005019002	raver1	74	85.417	ENSPVAG00000003689	RAVER1	72	85.417	Pteropus_vampyrus
ENSMZEG00005019002	raver1	100	92.730	ENSPNYG00000013284	raver1	100	92.730	Pundamilia_nyererei
ENSMZEG00005019002	raver1	98	70.548	ENSPNAG00000015476	raver1	100	68.801	Pygocentrus_nattereri
ENSMZEG00005019002	raver1	91	50.340	ENSRNOG00000020710	Raver1	68	58.171	Rattus_norvegicus
ENSMZEG00005019002	raver1	75	85.417	ENSRBIG00000034702	RAVER1	69	85.417	Rhinopithecus_bieti
ENSMZEG00005019002	raver1	75	85.417	ENSRROG00000031186	RAVER1	69	85.417	Rhinopithecus_roxellana
ENSMZEG00005019002	raver1	91	53.535	ENSSBOG00000023423	RAVER1	94	51.857	Saimiri_boliviensis_boliviensis
ENSMZEG00005019002	raver1	85	53.253	ENSSHAG00000008181	-	76	91.667	Sarcophilus_harrisii
ENSMZEG00005019002	raver1	98	84.414	ENSSMAG00000004546	raver1	100	84.239	Scophthalmus_maximus
ENSMZEG00005019002	raver1	98	87.414	ENSSDUG00000021063	raver1	100	87.193	Seriola_dumerili
ENSMZEG00005019002	raver1	98	87.414	ENSSLDG00000014505	raver1	100	87.193	Seriola_lalandi_dorsalis
ENSMZEG00005019002	raver1	98	88.797	ENSSPAG00000000688	raver1	100	88.692	Stegastes_partitus
ENSMZEG00005019002	raver1	73	77.193	ENSSSCG00000013650	-	78	77.193	Sus_scrofa
ENSMZEG00005019002	raver1	98	79.172	ENSTRUG00000025641	raver1	100	78.261	Takifugu_rubripes
ENSMZEG00005019002	raver1	63	85.417	ENSTTRG00000009552	RAVER1	72	85.417	Tursiops_truncatus
ENSMZEG00005019002	raver1	75	85.417	ENSUAMG00000020385	RAVER1	70	85.417	Ursus_americanus
ENSMZEG00005019002	raver1	91	51.617	ENSVVUG00000028976	RAVER1	94	51.351	Vulpes_vulpes
ENSMZEG00005019002	raver1	90	52.457	ENSXETG00000011622	raver1	94	50.877	Xenopus_tropicalis
ENSMZEG00005019002	raver1	100	80.868	ENSXCOG00000016368	raver1	100	80.868	Xiphophorus_couchianus
ENSMZEG00005019002	raver1	100	80.868	ENSXMAG00000000217	raver1	100	80.868	Xiphophorus_maculatus