EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005019166 (Gene tree)
Gene ID: 101469824
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 39768 bases
Position: chrLG16:4039436-4079203
Accession: 101469824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005025681	TUDOR	PF00567.24	6.1e-82	1	5
ENSMZEP00005025681	TUDOR	PF00567.24	6.1e-82	2	5
ENSMZEP00005025681	TUDOR	PF00567.24	6.1e-82	3	5
ENSMZEP00005025681	TUDOR	PF00567.24	6.1e-82	4	5
ENSMZEP00005025681	TUDOR	PF00567.24	6.1e-82	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005026514	-	8542	XM_004573029	ENSMZEP00005025681	1593 (aa)	XP_004573086	UPI000329BC6C

Gene Model

Click here to download ENSMZEG00005019166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005019166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005019166	rnf17	98	30.894	ENSG00000132972	RNF17	99	35.182	Homo_sapiens
ENSMZEG00005019166	rnf17	90	67.008	ENSAPOG00000017034	rnf17	97	67.008	Acanthochromis_polyacanthus
ENSMZEG00005019166	rnf17	98	31.053	ENSAMEG00000017340	RNF17	97	31.273	Ailuropoda_melanoleuca
ENSMZEG00005019166	rnf17	100	72.198	ENSAOCG00000018283	rnf17	100	72.198	Amphiprion_ocellaris
ENSMZEG00005019166	rnf17	89	65.315	ENSAPEG00000022338	rnf17	96	65.894	Amphiprion_percula
ENSMZEG00005019166	rnf17	90	66.115	ENSATEG00000002067	rnf17	99	66.115	Anabas_testudineus
ENSMZEG00005019166	rnf17	88	30.832	ENSAPLG00000003969	RNF17	99	30.969	Anas_platyrhynchos
ENSMZEG00005019166	rnf17	92	31.749	ENSACAG00000001418	RNF17	93	31.749	Anolis_carolinensis
ENSMZEG00005019166	rnf17	100	99.749	ENSACLG00000018279	rnf17	100	99.749	Astatotilapia_calliptera
ENSMZEG00005019166	rnf17	92	47.679	ENSAMXG00000011002	rnf17	100	46.970	Astyanax_mexicanus
ENSMZEG00005019166	rnf17	55	35.503	ENSBTAG00000000278	RNF17	99	35.503	Bos_taurus
ENSMZEG00005019166	rnf17	88	34.325	ENSCJAG00000018937	RNF17	99	35.693	Callithrix_jacchus
ENSMZEG00005019166	rnf17	96	31.572	ENSCAFG00000007418	RNF17	97	31.664	Canis_familiaris
ENSMZEG00005019166	rnf17	75	34.640	ENSCHIG00000026716	RNF17	99	36.041	Capra_hircus
ENSMZEG00005019166	rnf17	98	31.026	ENSTSYG00000000365	RNF17	99	35.294	Carlito_syrichta
ENSMZEG00005019166	rnf17	87	34.522	ENSCCAG00000026725	RNF17	99	35.493	Cebus_capucinus
ENSMZEG00005019166	rnf17	98	30.639	ENSCATG00000040352	RNF17	99	34.891	Cercocebus_atys
ENSMZEG00005019166	rnf17	98	31.695	ENSCLAG00000004127	RNF17	97	31.307	Chinchilla_lanigera
ENSMZEG00005019166	rnf17	98	30.779	ENSCSAG00000018019	RNF17	97	30.779	Chlorocebus_sabaeus
ENSMZEG00005019166	rnf17	52	45.926	ENSCHOG00000013310	RNF17	55	45.926	Choloepus_hoffmanni
ENSMZEG00005019166	rnf17	94	31.982	ENSCPBG00000020920	RNF17	98	31.995	Chrysemys_picta_bellii
ENSMZEG00005019166	rnf17	98	31.201	ENSCANG00000032927	RNF17	99	35.036	Colobus_angolensis_palliatus
ENSMZEG00005019166	rnf17	88	34.882	ENSCGRG00001022658	Rnf17	90	34.513	Cricetulus_griseus_chok1gshd
ENSMZEG00005019166	rnf17	88	34.882	ENSCGRG00000009924	Rnf17	90	34.513	Cricetulus_griseus_crigri
ENSMZEG00005019166	rnf17	95	55.621	ENSCSEG00000008626	rnf17	99	55.621	Cynoglossus_semilaevis
ENSMZEG00005019166	rnf17	76	59.116	ENSCVAG00000017008	rnf17	94	59.024	Cyprinodon_variegatus
ENSMZEG00005019166	rnf17	99	43.476	ENSDARG00000056387	rnf17	99	43.546	Danio_rerio
ENSMZEG00005019166	rnf17	98	30.845	ENSDNOG00000006115	RNF17	97	30.722	Dasypus_novemcinctus
ENSMZEG00005019166	rnf17	55	34.691	ENSEASG00005001421	-	99	34.691	Equus_asinus_asinus
ENSMZEG00005019166	rnf17	98	31.703	ENSECAG00000017152	RNF17	96	31.915	Equus_caballus
ENSMZEG00005019166	rnf17	99	48.592	ENSELUG00000005626	rnf17	99	48.422	Esox_lucius
ENSMZEG00005019166	rnf17	89	35.332	ENSFCAG00000004914	RNF17	99	35.493	Felis_catus
ENSMZEG00005019166	rnf17	74	33.116	ENSFALG00000008766	RNF17	79	33.116	Ficedula_albicollis
ENSMZEG00005019166	rnf17	88	33.414	ENSFDAG00000017857	RNF17	90	33.359	Fukomys_damarensis
ENSMZEG00005019166	rnf17	100	62.430	ENSFHEG00000014822	rnf17	99	62.492	Fundulus_heteroclitus
ENSMZEG00005019166	rnf17	58	47.977	ENSGMOG00000015560	-	100	47.977	Gadus_morhua
ENSMZEG00005019166	rnf17	81	73.684	ENSGAFG00000004463	rnf17	96	73.684	Gambusia_affinis
ENSMZEG00005019166	rnf17	93	30.689	ENSGAGG00000016999	RNF17	91	30.309	Gopherus_agassizii
ENSMZEG00005019166	rnf17	98	30.954	ENSGGOG00000014491	RNF17	99	35.036	Gorilla_gorilla
ENSMZEG00005019166	rnf17	100	98.870	ENSHBUG00000003554	rnf17	100	98.870	Haplochromis_burtoni
ENSMZEG00005019166	rnf17	87	34.631	ENSHGLG00000007270	RNF17	97	30.625	Heterocephalus_glaber_female
ENSMZEG00005019166	rnf17	87	34.550	ENSHGLG00100017393	RNF17	97	30.929	Heterocephalus_glaber_male
ENSMZEG00005019166	rnf17	81	64.865	ENSHCOG00000017676	rnf17	96	64.865	Hippocampus_comes
ENSMZEG00005019166	rnf17	86	49.662	ENSIPUG00000001087	rnf17	92	49.662	Ictalurus_punctatus
ENSMZEG00005019166	rnf17	50	33.234	ENSSTOG00000011255	-	98	33.531	Ictidomys_tridecemlineatus
ENSMZEG00005019166	rnf17	98	31.976	ENSJJAG00000016584	Rnf17	76	34.612	Jaculus_jaculus
ENSMZEG00005019166	rnf17	100	67.600	ENSKMAG00000013403	rnf17	99	67.786	Kryptolebias_marmoratus
ENSMZEG00005019166	rnf17	90	61.213	ENSLBEG00000014910	rnf17	96	61.213	Labrus_bergylta
ENSMZEG00005019166	rnf17	56	35.138	ENSLACG00000000323	RNF17	81	35.032	Latimeria_chalumnae
ENSMZEG00005019166	rnf17	99	37.285	ENSLOCG00000010768	rnf17	99	37.010	Lepisosteus_oculatus
ENSMZEG00005019166	rnf17	98	31.001	ENSMFAG00000032388	RNF17	99	35.036	Macaca_fascicularis
ENSMZEG00005019166	rnf17	98	31.066	ENSMMUG00000014610	RNF17	99	35.036	Macaca_mulatta
ENSMZEG00005019166	rnf17	98	31.001	ENSMNEG00000011234	RNF17	99	35.036	Macaca_nemestrina
ENSMZEG00005019166	rnf17	98	30.857	ENSMLEG00000030227	RNF17	97	30.857	Mandrillus_leucophaeus
ENSMZEG00005019166	rnf17	87	65.432	ENSMAMG00000020403	rnf17	98	65.432	Mastacembelus_armatus
ENSMZEG00005019166	rnf17	77	31.391	ENSMGAG00000015138	RNF17	99	31.260	Meleagris_gallopavo
ENSMZEG00005019166	rnf17	88	34.413	ENSMAUG00000004788	Rnf17	90	33.881	Mesocricetus_auratus
ENSMZEG00005019166	rnf17	87	33.997	ENSMICG00000010364	RNF17	99	34.532	Microcebus_murinus
ENSMZEG00005019166	rnf17	60	34.889	ENSMOCG00000011818	-	99	34.961	Microtus_ochrogaster
ENSMZEG00005019166	rnf17	86	61.116	ENSMMOG00000019514	rnf17	98	61.116	Mola_mola
ENSMZEG00005019166	rnf17	98	32.110	ENSMODG00000007827	RNF17	96	32.128	Monodelphis_domestica
ENSMZEG00005019166	rnf17	89	60.608	ENSMALG00000016943	rnf17	99	60.014	Monopterus_albus
ENSMZEG00005019166	rnf17	90	34.550	MGP_CAROLIEiJ_G0019337	Rnf17	99	30.755	Mus_caroli
ENSMZEG00005019166	rnf17	90	34.388	ENSMUSG00000000365	Rnf17	99	30.871	Mus_musculus
ENSMZEG00005019166	rnf17	88	34.556	MGP_PahariEiJ_G0030355	Rnf17	90	34.146	Mus_pahari
ENSMZEG00005019166	rnf17	90	34.874	MGP_SPRETEiJ_G0020228	Rnf17	91	34.456	Mus_spretus
ENSMZEG00005019166	rnf17	98	31.544	ENSMPUG00000013305	RNF17	97	31.409	Mustela_putorius_furo
ENSMZEG00005019166	rnf17	98	30.995	ENSMLUG00000003903	RNF17	97	31.208	Myotis_lucifugus
ENSMZEG00005019166	rnf17	98	32.054	ENSNGAG00000013553	Rnf17	97	32.012	Nannospalax_galili
ENSMZEG00005019166	rnf17	80	82.436	ENSNBRG00000012006	rnf17	96	82.436	Neolamprologus_brichardi
ENSMZEG00005019166	rnf17	98	30.672	ENSNLEG00000013780	RNF17	99	34.751	Nomascus_leucogenys
ENSMZEG00005019166	rnf17	80	36.986	ENSOPRG00000016743	-	66	32.000	Ochotona_princeps
ENSMZEG00005019166	rnf17	100	95.480	ENSONIG00000015746	rnf17	100	95.480	Oreochromis_niloticus
ENSMZEG00005019166	rnf17	98	30.854	ENSOCUG00000007384	RNF17	97	30.901	Oryctolagus_cuniculus
ENSMZEG00005019166	rnf17	89	56.641	ENSORLG00000012818	rnf17	99	56.430	Oryzias_latipes
ENSMZEG00005019166	rnf17	100	56.207	ENSORLG00020009879	-	100	56.164	Oryzias_latipes_hni
ENSMZEG00005019166	rnf17	99	56.180	ENSORLG00015013027	-	99	56.012	Oryzias_latipes_hsok
ENSMZEG00005019166	rnf17	76	61.345	ENSOMEG00000009891	rnf17	97	60.976	Oryzias_melastigma
ENSMZEG00005019166	rnf17	98	30.591	ENSOGAG00000014803	RNF17	97	31.026	Otolemur_garnettii
ENSMZEG00005019166	rnf17	98	31.782	ENSOARG00000014641	RNF17	99	31.903	Ovis_aries
ENSMZEG00005019166	rnf17	77	33.566	ENSPPAG00000028779	RNF17	99	35.044	Pan_paniscus
ENSMZEG00005019166	rnf17	89	35.494	ENSPPRG00000009230	RNF17	99	35.346	Panthera_pardus
ENSMZEG00005019166	rnf17	89	35.494	ENSPTIG00000001738	RNF17	99	35.346	Panthera_tigris_altaica
ENSMZEG00005019166	rnf17	98	30.815	ENSPTRG00000005713	RNF17	99	35.044	Pan_troglodytes
ENSMZEG00005019166	rnf17	98	30.797	ENSPANG00000007640	RNF17	99	34.891	Papio_anubis
ENSMZEG00005019166	rnf17	79	43.726	ENSPKIG00000001648	rnf17	93	44.409	Paramormyrops_kingsleyae
ENSMZEG00005019166	rnf17	74	36.172	ENSPSIG00000011245	RNF17	99	36.746	Pelodiscus_sinensis
ENSMZEG00005019166	rnf17	90	34.765	ENSPEMG00000008693	Rnf17	91	34.272	Peromyscus_maniculatus_bairdii
ENSMZEG00005019166	rnf17	68	34.040	ENSPCIG00000009190	-	91	33.929	Phascolarctos_cinereus
ENSMZEG00005019166	rnf17	100	64.153	ENSPFOG00000007124	rnf17	100	64.356	Poecilia_formosa
ENSMZEG00005019166	rnf17	100	65.605	ENSPLAG00000006198	rnf17	99	65.750	Poecilia_latipinna
ENSMZEG00005019166	rnf17	100	65.605	ENSPMEG00000022432	rnf17	99	65.750	Poecilia_mexicana
ENSMZEG00005019166	rnf17	83	69.841	ENSPREG00000001414	rnf17	94	69.841	Poecilia_reticulata
ENSMZEG00005019166	rnf17	98	30.635	ENSPPYG00000005215	RNF17	88	33.897	Pongo_abelii
ENSMZEG00005019166	rnf17	61	38.072	ENSPCAG00000002665	RNF17	65	38.072	Procavia_capensis
ENSMZEG00005019166	rnf17	71	47.794	ENSPVAG00000013021	RNF17	73	47.794	Pteropus_vampyrus
ENSMZEG00005019166	rnf17	86	56.689	ENSPNAG00000027505	rnf17	99	51.561	Pygocentrus_nattereri
ENSMZEG00005019166	rnf17	98	31.049	ENSRNOG00000008059	Rnf17	97	30.957	Rattus_norvegicus
ENSMZEG00005019166	rnf17	98	30.303	ENSRBIG00000027010	RNF17	97	30.834	Rhinopithecus_bieti
ENSMZEG00005019166	rnf17	98	31.034	ENSRROG00000022801	RNF17	99	35.234	Rhinopithecus_roxellana
ENSMZEG00005019166	rnf17	87	34.569	ENSSBOG00000021661	RNF17	99	35.819	Saimiri_boliviensis_boliviensis
ENSMZEG00005019166	rnf17	98	31.793	ENSSHAG00000005609	RNF17	97	31.827	Sarcophilus_harrisii
ENSMZEG00005019166	rnf17	74	43.655	ENSSFOG00015023037	rnf17	89	43.655	Scleropages_formosus
ENSMZEG00005019166	rnf17	91	61.149	ENSSMAG00000007429	rnf17	98	61.055	Scophthalmus_maximus
ENSMZEG00005019166	rnf17	90	68.104	ENSSDUG00000013530	rnf17	100	68.104	Seriola_dumerili
ENSMZEG00005019166	rnf17	91	69.444	ENSSLDG00000019577	rnf17	99	69.444	Seriola_lalandi_dorsalis
ENSMZEG00005019166	rnf17	70	34.535	ENSSARG00000003016	RNF17	63	34.535	Sorex_araneus
ENSMZEG00005019166	rnf17	90	31.233	ENSSPUG00000008917	RNF17	96	31.301	Sphenodon_punctatus
ENSMZEG00005019166	rnf17	89	66.783	ENSSPAG00000001925	rnf17	99	66.853	Stegastes_partitus
ENSMZEG00005019166	rnf17	99	30.391	ENSSSCG00000009572	RNF17	98	30.902	Sus_scrofa
ENSMZEG00005019166	rnf17	58	32.956	ENSTGUG00000011267	-	100	32.956	Taeniopygia_guttata
ENSMZEG00005019166	rnf17	99	51.434	ENSTRUG00000015498	rnf17	99	51.434	Takifugu_rubripes
ENSMZEG00005019166	rnf17	74	54.317	ENSTNIG00000015681	rnf17	99	54.317	Tetraodon_nigroviridis
ENSMZEG00005019166	rnf17	77	40.417	ENSTBEG00000000282	RNF17	74	40.417	Tupaia_belangeri
ENSMZEG00005019166	rnf17	50	41.627	ENSUMAG00000013953	-	99	34.853	Ursus_maritimus
ENSMZEG00005019166	rnf17	84	45.070	ENSVPAG00000011388	RNF17	78	45.070	Vicugna_pacos
ENSMZEG00005019166	rnf17	98	31.660	ENSVVUG00000006226	RNF17	97	31.659	Vulpes_vulpes
ENSMZEG00005019166	rnf17	70	31.676	ENSXETG00000034020	RNF17	99	40.000	Xenopus_tropicalis
ENSMZEG00005019166	rnf17	90	60.231	ENSXCOG00000018295	rnf17	99	61.236	Xiphophorus_couchianus
ENSMZEG00005019166	rnf17	90	62.055	ENSXMAG00000014747	rnf17	99	62.534	Xiphophorus_maculatus