EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005019392 (Gene tree)
Gene ID: 101482918
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 7412 bases
Position: chrLG7:9049915-9057326
Accession: 101482918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005026009	PRP4	PF08799.11	1.2e-13	1	1
ENSMZEP00005026004	PRP4	PF08799.11	1.3e-13	1	1
ENSMZEP00005026004	Prp18	PF02840.15	9.6e-63	1	1
ENSMZEP00005026009	Prp18	PF02840.15	9.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005026848	-	2577	XM_004553343	ENSMZEP00005026009	341 (aa)	XP_004553400	UPI000329DC3E
ENSMZET00005026843	-	2604	XM_004553342	ENSMZEP00005026004	350 (aa)	XP_004553399	UPI000329A678

Gene Model

Click here to download ENSMZEG00005019392's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005019392's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005019392	prpf18	100	85.088	ENSG00000165630	PRPF18	100	85.088	Homo_sapiens
ENSMZEG00005019392	prpf18	100	94.857	ENSAPOG00000024177	prpf18	100	94.857	Acanthochromis_polyacanthus
ENSMZEG00005019392	prpf18	100	84.503	ENSAMEG00000013591	-	100	84.503	Ailuropoda_melanoleuca
ENSMZEG00005019392	prpf18	100	96.481	ENSACIG00000001186	prpf18	100	96.481	Amphilophus_citrinellus
ENSMZEG00005019392	prpf18	98	94.910	ENSAOCG00000006572	prpf18	94	94.737	Amphiprion_ocellaris
ENSMZEG00005019392	prpf18	100	95.015	ENSAPEG00000004564	prpf18	100	95.015	Amphiprion_percula
ENSMZEG00005019392	prpf18	100	94.428	ENSATEG00000000303	prpf18	100	94.428	Anabas_testudineus
ENSMZEG00005019392	prpf18	99	82.941	ENSAPLG00000003387	-	99	82.941	Anas_platyrhynchos
ENSMZEG00005019392	prpf18	100	83.721	ENSACAG00000000818	-	100	83.721	Anolis_carolinensis
ENSMZEG00005019392	prpf18	100	84.795	ENSANAG00000037445	-	100	84.795	Aotus_nancymaae
ENSMZEG00005019392	prpf18	100	100.000	ENSACLG00000026296	prpf18	100	100.000	Astatotilapia_calliptera
ENSMZEG00005019392	prpf18	100	88.857	ENSAMXG00000012848	prpf18	100	88.857	Astyanax_mexicanus
ENSMZEG00005019392	prpf18	100	84.211	ENSBTAG00000017244	PRPF18	100	84.211	Bos_taurus
ENSMZEG00005019392	prpf18	98	40.517	WBGene00009320	F32B6.3	97	39.769	Caenorhabditis_elegans
ENSMZEG00005019392	prpf18	100	84.795	ENSCJAG00000009432	-	100	84.795	Callithrix_jacchus
ENSMZEG00005019392	prpf18	100	84.503	ENSCAFG00000004735	-	100	84.503	Canis_familiaris
ENSMZEG00005019392	prpf18	100	84.503	ENSCAFG00020007712	-	100	84.503	Canis_lupus_dingo
ENSMZEG00005019392	prpf18	100	84.211	ENSCHIG00000000499	-	100	84.211	Capra_hircus
ENSMZEG00005019392	prpf18	100	84.795	ENSTSYG00000003517	-	100	84.795	Carlito_syrichta
ENSMZEG00005019392	prpf18	100	85.088	ENSCPOG00000021069	-	100	85.088	Cavia_porcellus
ENSMZEG00005019392	prpf18	100	84.795	ENSCCAG00000036822	-	100	84.795	Cebus_capucinus
ENSMZEG00005019392	prpf18	100	74.561	ENSCATG00000016633	-	100	74.561	Cercocebus_atys
ENSMZEG00005019392	prpf18	100	84.503	ENSCLAG00000011770	-	100	84.503	Chinchilla_lanigera
ENSMZEG00005019392	prpf18	100	83.476	ENSCSAG00000013109	-	100	83.476	Chlorocebus_sabaeus
ENSMZEG00005019392	prpf18	100	80.618	ENSCPBG00000003100	-	100	81.461	Chrysemys_picta_bellii
ENSMZEG00005019392	prpf18	99	55.882	ENSCING00000020481	-	97	55.620	Ciona_intestinalis
ENSMZEG00005019392	prpf18	99	56.105	ENSCSAVG00000010546	-	99	55.394	Ciona_savignyi
ENSMZEG00005019392	prpf18	100	85.088	ENSCANG00000034900	-	100	85.088	Colobus_angolensis_palliatus
ENSMZEG00005019392	prpf18	100	84.503	ENSCGRG00001023665	Prpf18	100	84.503	Cricetulus_griseus_chok1gshd
ENSMZEG00005019392	prpf18	100	84.503	ENSCGRG00000014690	Prpf18	100	84.503	Cricetulus_griseus_crigri
ENSMZEG00005019392	prpf18	100	89.736	ENSCSEG00000005536	prpf18	99	89.736	Cynoglossus_semilaevis
ENSMZEG00005019392	prpf18	100	92.375	ENSCVAG00000012401	prpf18	100	92.375	Cyprinodon_variegatus
ENSMZEG00005019392	prpf18	100	90.058	ENSDARG00000058306	prpf18	100	90.058	Danio_rerio
ENSMZEG00005019392	prpf18	100	84.503	ENSDNOG00000035607	-	100	84.503	Dasypus_novemcinctus
ENSMZEG00005019392	prpf18	100	84.211	ENSDORG00000000858	Prpf18	100	84.211	Dipodomys_ordii
ENSMZEG00005019392	prpf18	99	51.775	FBgn0027784	Prp18	98	51.183	Drosophila_melanogaster
ENSMZEG00005019392	prpf18	100	76.608	ENSETEG00000015060	-	100	76.608	Echinops_telfairi
ENSMZEG00005019392	prpf18	100	70.605	ENSEBUG00000016502	prpf18	99	69.741	Eptatretus_burgeri
ENSMZEG00005019392	prpf18	100	84.795	ENSEASG00005019373	-	100	84.795	Equus_asinus_asinus
ENSMZEG00005019392	prpf18	100	84.795	ENSECAG00000006997	PRPF18	100	84.795	Equus_caballus
ENSMZEG00005019392	prpf18	92	51.266	ENSEEUG00000001171	-	100	51.266	Erinaceus_europaeus
ENSMZEG00005019392	prpf18	100	88.047	ENSELUG00000022190	prpf18	100	88.047	Esox_lucius
ENSMZEG00005019392	prpf18	100	84.211	ENSFCAG00000004436	-	100	84.211	Felis_catus
ENSMZEG00005019392	prpf18	93	80.000	ENSFALG00000001912	-	97	80.308	Ficedula_albicollis
ENSMZEG00005019392	prpf18	94	86.562	ENSFDAG00000014026	-	100	86.562	Fukomys_damarensis
ENSMZEG00005019392	prpf18	99	57.391	ENSFDAG00000010713	-	97	57.391	Fukomys_damarensis
ENSMZEG00005019392	prpf18	80	94.872	ENSFHEG00000020125	prpf18	98	94.757	Fundulus_heteroclitus
ENSMZEG00005019392	prpf18	99	86.765	ENSGMOG00000012210	prpf18	99	86.765	Gadus_morhua
ENSMZEG00005019392	prpf18	100	83.918	ENSGALG00000043593	-	100	83.918	Gallus_gallus
ENSMZEG00005019392	prpf18	100	92.082	ENSGAFG00000006034	prpf18	100	92.082	Gambusia_affinis
ENSMZEG00005019392	prpf18	100	89.443	ENSGACG00000012232	prpf18	100	89.443	Gasterosteus_aculeatus
ENSMZEG00005019392	prpf18	100	84.503	ENSGAGG00000016878	-	100	84.503	Gopherus_agassizii
ENSMZEG00005019392	prpf18	92	83.861	ENSGGOG00000025188	-	96	83.861	Gorilla_gorilla
ENSMZEG00005019392	prpf18	100	100.000	ENSHBUG00000010264	prpf18	100	100.000	Haplochromis_burtoni
ENSMZEG00005019392	prpf18	100	84.503	ENSHGLG00000018534	PRPF18	100	84.503	Heterocephalus_glaber_female
ENSMZEG00005019392	prpf18	94	86.250	ENSHGLG00100012161	-	98	86.250	Heterocephalus_glaber_male
ENSMZEG00005019392	prpf18	100	94.135	ENSHCOG00000015987	prpf18	100	94.135	Hippocampus_comes
ENSMZEG00005019392	prpf18	100	83.003	ENSIPUG00000007432	prpf18	100	83.853	Ictalurus_punctatus
ENSMZEG00005019392	prpf18	100	84.503	ENSSTOG00000008735	-	100	84.503	Ictidomys_tridecemlineatus
ENSMZEG00005019392	prpf18	100	62.974	ENSJJAG00000015191	-	100	62.974	Jaculus_jaculus
ENSMZEG00005019392	prpf18	100	85.088	ENSJJAG00000024041	-	100	85.088	Jaculus_jaculus
ENSMZEG00005019392	prpf18	100	92.962	ENSKMAG00000012124	prpf18	100	92.962	Kryptolebias_marmoratus
ENSMZEG00005019392	prpf18	97	90.149	ENSLBEG00000028466	prpf18	99	90.149	Labrus_bergylta
ENSMZEG00005019392	prpf18	100	84.211	ENSLACG00000009885	prpf18	100	85.088	Latimeria_chalumnae
ENSMZEG00005019392	prpf18	100	88.596	ENSLOCG00000016736	prpf18	100	88.596	Lepisosteus_oculatus
ENSMZEG00005019392	prpf18	100	85.088	ENSLAFG00000007753	-	100	85.088	Loxodonta_africana
ENSMZEG00005019392	prpf18	100	85.088	ENSMFAG00000000540	-	100	85.088	Macaca_fascicularis
ENSMZEG00005019392	prpf18	100	85.088	ENSMMUG00000015071	PRPF18	93	92.715	Macaca_mulatta
ENSMZEG00005019392	prpf18	100	85.088	ENSMNEG00000024679	-	100	85.088	Macaca_nemestrina
ENSMZEG00005019392	prpf18	100	69.883	ENSMLEG00000031715	-	100	69.883	Mandrillus_leucophaeus
ENSMZEG00005019392	prpf18	100	93.714	ENSMAMG00000006610	prpf18	100	93.714	Mastacembelus_armatus
ENSMZEG00005019392	prpf18	100	83.918	ENSMGAG00000005023	-	100	83.918	Meleagris_gallopavo
ENSMZEG00005019392	prpf18	100	84.795	ENSMICG00000006572	-	100	84.795	Microcebus_murinus
ENSMZEG00005019392	prpf18	100	85.088	ENSMOCG00000021468	Prpf18	100	85.088	Microtus_ochrogaster
ENSMZEG00005019392	prpf18	100	92.375	ENSMMOG00000013012	prpf18	100	92.375	Mola_mola
ENSMZEG00005019392	prpf18	96	78.994	ENSMODG00000016902	-	92	78.994	Monodelphis_domestica
ENSMZEG00005019392	prpf18	100	76.023	ENSMODG00000024043	-	100	76.023	Monodelphis_domestica
ENSMZEG00005019392	prpf18	100	82.609	ENSMALG00000005486	prpf18	100	85.756	Monopterus_albus
ENSMZEG00005019392	prpf18	100	84.503	MGP_CAROLIEiJ_G0023143	Prpf18	100	93.151	Mus_caroli
ENSMZEG00005019392	prpf18	100	84.503	ENSMUSG00000039449	Prpf18	100	93.151	Mus_musculus
ENSMZEG00005019392	prpf18	100	84.795	MGP_PahariEiJ_G0019203	Prpf18	100	93.151	Mus_pahari
ENSMZEG00005019392	prpf18	100	84.795	MGP_SPRETEiJ_G0024061	Prpf18	100	93.151	Mus_spretus
ENSMZEG00005019392	prpf18	100	84.211	ENSMPUG00000000938	-	100	84.211	Mustela_putorius_furo
ENSMZEG00005019392	prpf18	100	84.211	ENSMLUG00000009200	-	100	84.211	Myotis_lucifugus
ENSMZEG00005019392	prpf18	100	85.088	ENSNGAG00000012500	-	100	85.088	Nannospalax_galili
ENSMZEG00005019392	prpf18	68	81.897	ENSNGAG00000023550	-	82	82.609	Nannospalax_galili
ENSMZEG00005019392	prpf18	100	99.707	ENSNBRG00000001778	prpf18	100	99.707	Neolamprologus_brichardi
ENSMZEG00005019392	prpf18	100	85.088	ENSNLEG00000012186	-	100	85.088	Nomascus_leucogenys
ENSMZEG00005019392	prpf18	76	72.201	ENSMEUG00000005032	-	75	70.656	Notamacropus_eugenii
ENSMZEG00005019392	prpf18	77	65.660	ENSOPRG00000002153	-	100	65.660	Ochotona_princeps
ENSMZEG00005019392	prpf18	100	84.211	ENSODEG00000003770	-	100	84.211	Octodon_degus
ENSMZEG00005019392	prpf18	98	98.503	ENSONIG00000014854	prpf18	96	98.503	Oreochromis_niloticus
ENSMZEG00005019392	prpf18	100	84.211	ENSOANG00000015404	-	100	84.211	Ornithorhynchus_anatinus
ENSMZEG00005019392	prpf18	100	84.795	ENSOCUG00000027756	-	96	85.321	Oryctolagus_cuniculus
ENSMZEG00005019392	prpf18	100	92.857	ENSORLG00000010293	prpf18	100	92.857	Oryzias_latipes
ENSMZEG00005019392	prpf18	100	92.962	ENSORLG00020001530	prpf18	100	92.962	Oryzias_latipes_hni
ENSMZEG00005019392	prpf18	100	92.669	ENSORLG00015013705	prpf18	100	92.669	Oryzias_latipes_hsok
ENSMZEG00005019392	prpf18	100	94.135	ENSOMEG00000009167	prpf18	100	94.135	Oryzias_melastigma
ENSMZEG00005019392	prpf18	100	83.918	ENSOGAG00000007294	-	100	83.918	Otolemur_garnettii
ENSMZEG00005019392	prpf18	100	82.621	ENSOARG00000006243	-	100	82.621	Ovis_aries
ENSMZEG00005019392	prpf18	100	85.088	ENSPPAG00000041959	-	100	85.088	Pan_paniscus
ENSMZEG00005019392	prpf18	100	84.211	ENSPPRG00000000107	-	100	84.211	Panthera_pardus
ENSMZEG00005019392	prpf18	100	84.211	ENSPTIG00000021094	-	100	84.211	Panthera_tigris_altaica
ENSMZEG00005019392	prpf18	100	85.088	ENSPTRG00000002306	PRPF18	100	85.088	Pan_troglodytes
ENSMZEG00005019392	prpf18	100	84.795	ENSPANG00000023346	-	100	84.795	Papio_anubis
ENSMZEG00005019392	prpf18	100	86.610	ENSPKIG00000014128	prpf18	96	86.610	Paramormyrops_kingsleyae
ENSMZEG00005019392	prpf18	100	83.918	ENSPSIG00000016064	-	100	83.918	Pelodiscus_sinensis
ENSMZEG00005019392	prpf18	100	85.088	ENSPMGG00000016486	prpf18	100	85.088	Periophthalmus_magnuspinnatus
ENSMZEG00005019392	prpf18	100	84.795	ENSPEMG00000013704	Prpf18	100	84.795	Peromyscus_maniculatus_bairdii
ENSMZEG00005019392	prpf18	100	74.000	ENSPMAG00000000204	prpf18	100	74.000	Petromyzon_marinus
ENSMZEG00005019392	prpf18	92	83.228	ENSPCIG00000012963	-	99	83.228	Phascolarctos_cinereus
ENSMZEG00005019392	prpf18	100	91.429	ENSPFOG00000017611	prpf18	100	91.429	Poecilia_formosa
ENSMZEG00005019392	prpf18	100	91.789	ENSPLAG00000000369	prpf18	100	91.789	Poecilia_latipinna
ENSMZEG00005019392	prpf18	100	92.082	ENSPMEG00000005183	prpf18	100	92.082	Poecilia_mexicana
ENSMZEG00005019392	prpf18	100	91.496	ENSPREG00000015232	prpf18	100	91.496	Poecilia_reticulata
ENSMZEG00005019392	prpf18	100	84.795	ENSPPYG00000002101	PRPF18	100	84.795	Pongo_abelii
ENSMZEG00005019392	prpf18	100	67.251	ENSPCAG00000010833	-	100	67.251	Procavia_capensis
ENSMZEG00005019392	prpf18	100	80.409	ENSPCOG00000013057	-	100	80.409	Propithecus_coquereli
ENSMZEG00005019392	prpf18	100	51.754	ENSPVAG00000002947	-	100	51.754	Pteropus_vampyrus
ENSMZEG00005019392	prpf18	100	99.714	ENSPNYG00000003554	prpf18	100	99.714	Pundamilia_nyererei
ENSMZEG00005019392	prpf18	100	88.889	ENSPNAG00000023151	prpf18	100	88.889	Pygocentrus_nattereri
ENSMZEG00005019392	prpf18	100	84.503	ENSRNOG00000018396	Prpf18	100	84.503	Rattus_norvegicus
ENSMZEG00005019392	prpf18	100	84.795	ENSRBIG00000028028	-	100	84.795	Rhinopithecus_bieti
ENSMZEG00005019392	prpf18	100	85.088	ENSRROG00000040695	-	100	85.088	Rhinopithecus_roxellana
ENSMZEG00005019392	prpf18	100	84.795	ENSSBOG00000034482	-	100	84.795	Saimiri_boliviensis_boliviensis
ENSMZEG00005019392	prpf18	100	70.175	ENSSHAG00000009669	-	100	70.175	Sarcophilus_harrisii
ENSMZEG00005019392	prpf18	100	84.211	ENSSHAG00000016463	-	100	84.211	Sarcophilus_harrisii
ENSMZEG00005019392	prpf18	77	45.455	ENSSFOG00015021154	-	89	47.639	Scleropages_formosus
ENSMZEG00005019392	prpf18	98	86.667	ENSSFOG00015022118	prpf18	100	81.556	Scleropages_formosus
ENSMZEG00005019392	prpf18	100	90.857	ENSSMAG00000005308	prpf18	100	90.857	Scophthalmus_maximus
ENSMZEG00005019392	prpf18	100	95.429	ENSSDUG00000015428	prpf18	100	95.429	Seriola_dumerili
ENSMZEG00005019392	prpf18	100	95.143	ENSSLDG00000023989	prpf18	100	95.143	Seriola_lalandi_dorsalis
ENSMZEG00005019392	prpf18	100	56.725	ENSSARG00000005307	-	100	56.725	Sorex_araneus
ENSMZEG00005019392	prpf18	100	84.211	ENSSPUG00000002619	-	100	84.211	Sphenodon_punctatus
ENSMZEG00005019392	prpf18	100	94.571	ENSSPAG00000019502	prpf18	100	94.571	Stegastes_partitus
ENSMZEG00005019392	prpf18	100	84.503	ENSSSCG00000026354	-	100	84.503	Sus_scrofa
ENSMZEG00005019392	prpf18	100	83.333	ENSTGUG00000002286	-	100	83.333	Taeniopygia_guttata
ENSMZEG00005019392	prpf18	100	88.856	ENSTRUG00000011278	prpf18	100	88.856	Takifugu_rubripes
ENSMZEG00005019392	prpf18	100	89.736	ENSTNIG00000000911	prpf18	100	89.736	Tetraodon_nigroviridis
ENSMZEG00005019392	prpf18	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSMZEG00005019392	prpf18	100	85.380	ENSTTRG00000011117	PRPF18	100	85.380	Tursiops_truncatus
ENSMZEG00005019392	prpf18	91	87.138	ENSUAMG00000001815	-	93	87.138	Ursus_americanus
ENSMZEG00005019392	prpf18	100	79.825	ENSUMAG00000012329	-	100	79.825	Ursus_maritimus
ENSMZEG00005019392	prpf18	100	78.947	ENSVPAG00000011486	-	100	78.947	Vicugna_pacos
ENSMZEG00005019392	prpf18	100	84.503	ENSVVUG00000005453	-	100	84.503	Vulpes_vulpes
ENSMZEG00005019392	prpf18	100	76.232	ENSXETG00000024057	prpf18	100	75.942	Xenopus_tropicalis
ENSMZEG00005019392	prpf18	100	91.254	ENSXCOG00000020414	prpf18	100	91.254	Xiphophorus_couchianus
ENSMZEG00005019392	prpf18	100	91.789	ENSXMAG00000004713	prpf18	91	91.789	Xiphophorus_maculatus