EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005019425 (Gene tree)
Gene ID
101477931
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Plus strand
Length
6639 bases
Position
chrLG18:131335-137973
Accession
101477931
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005026044RRM_1PF00076.221.2e-4412
ENSMZEP00005026044RRM_1PF00076.221.2e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005026883-3548XM_004572428ENSMZEP00005026044522 (aa)XP_004572485UPI0003299C14
Gene Model
Click here to download ENSMZEG00005019425's gene model file
Pathways
Pathway IDPathway NameSource
mze03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005019425's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005019425-9981.784ENSG00000179950PUF6010082.534Homo_sapiens
ENSMZEG00005019425-10082.922ENSAPOG00000001713puf60b10082.922Acanthochromis_polyacanthus
ENSMZEG00005019425-9980.076ENSAMEG00000006406PUF609380.076Ailuropoda_melanoleuca
ENSMZEG00005019425-9891.765ENSACIG00000003263-10091.961Amphilophus_citrinellus
ENSMZEG00005019425-9883.658ENSACIG00000021705puf60b10083.658Amphilophus_citrinellus
ENSMZEG00005019425-10082.922ENSAOCG00000005395puf60b10083.658Amphiprion_ocellaris
ENSMZEG00005019425-10092.146ENSAOCG00000015558-10091.762Amphiprion_ocellaris
ENSMZEG00005019425-9978.846ENSAPEG00000011923puf60b9978.846Amphiprion_percula
ENSMZEG00005019425-9878.835ENSAPEG00000001836-10079.389Amphiprion_percula
ENSMZEG00005019425-10092.912ENSATEG00000006303-10092.912Anabas_testudineus
ENSMZEG00005019425-10082.732ENSATEG00000001730puf60b10082.732Anabas_testudineus
ENSMZEG00005019425-9981.594ENSAPLG00000010150PUF6010081.973Anas_platyrhynchos
ENSMZEG00005019425-9881.333ENSACAG00000001645PUF609681.679Anolis_carolinensis
ENSMZEG00005019425-9981.973ENSANAG00000018626PUF6010082.726Aotus_nancymaae
ENSMZEG00005019425-9883.658ENSACLG00000004462puf60b10083.658Astatotilapia_calliptera
ENSMZEG00005019425-9883.681ENSAMXG00000036570puf60a10081.331Astyanax_mexicanus
ENSMZEG00005019425-9876.281ENSAMXG00000041030puf60b10077.989Astyanax_mexicanus
ENSMZEG00005019425-9981.784ENSBTAG00000037493PUF609981.784Bos_taurus
ENSMZEG00005019425-7749.827WBGene00004389rnp-68349.835Caenorhabditis_elegans
ENSMZEG00005019425-9981.784ENSCJAG00000021485PUF609981.203Callithrix_jacchus
ENSMZEG00005019425-9981.594ENSCAFG00000001400PUF609381.594Canis_familiaris
ENSMZEG00005019425-9981.973ENSCAFG00020018754PUF609981.391Canis_lupus_dingo
ENSMZEG00005019425-9981.404ENSCHIG00000001618PUF608781.784Capra_hircus
ENSMZEG00005019425-9981.973ENSTSYG00000011912PUF6010082.726Carlito_syrichta
ENSMZEG00005019425-9976.836ENSCPOG00000014613PUF609477.401Cavia_porcellus
ENSMZEG00005019425-9980.414ENSCCAG00000007744PUF609981.203Cebus_capucinus
ENSMZEG00005019425-9981.784ENSCATG00000035405PUF609981.203Cercocebus_atys
ENSMZEG00005019425-9981.973ENSCLAG00000009154PUF609381.973Chinchilla_lanigera
ENSMZEG00005019425-9882.534ENSCSAG00000008878PUF6010082.534Chlorocebus_sabaeus
ENSMZEG00005019425-9882.342ENSCPBG00000005595PUF609981.132Chrysemys_picta_bellii
ENSMZEG00005019425-9649.016ENSCING00000008436-9548.743Ciona_intestinalis
ENSMZEG00005019425-6656.267ENSCING00000002156-9256.389Ciona_intestinalis
ENSMZEG00005019425-9545.294ENSCSAVG00000004765-9749.105Ciona_savignyi
ENSMZEG00005019425-9553.257ENSCSAVG00000001385-9953.198Ciona_savignyi
ENSMZEG00005019425-7981.991ENSCANG00000041843PUF6010081.991Colobus_angolensis_palliatus
ENSMZEG00005019425-9982.163ENSCGRG00001017442Puf609382.163Cricetulus_griseus_chok1gshd
ENSMZEG00005019425-9982.163ENSCGRG00000003717Puf609382.163Cricetulus_griseus_crigri
ENSMZEG00005019425-9980.732ENSCSEG00000014845-9181.310Cynoglossus_semilaevis
ENSMZEG00005019425-9983.301ENSCSEG00000019887puf60b9383.301Cynoglossus_semilaevis
ENSMZEG00005019425-8990.043ENSCVAG00000001560-9790.043Cyprinodon_variegatus
ENSMZEG00005019425-9882.685ENSCVAG00000009386puf60b10083.074Cyprinodon_variegatus
ENSMZEG00005019425-9876.128ENSDARG00000001241puf60b10088.976Danio_rerio
ENSMZEG00005019425-9883.109ENSDARG00000032175puf60a10090.254Danio_rerio
ENSMZEG00005019425-9668.164ENSDNOG00000043278PUF609068.750Dasypus_novemcinctus
ENSMZEG00005019425-9981.973ENSDORG00000004585Puf609581.973Dipodomys_ordii
ENSMZEG00005019425-8364.360FBgn0028577hfp9947.331Drosophila_melanogaster
ENSMZEG00005019425-9568.862ENSEBUG00000005470-9266.920Eptatretus_burgeri
ENSMZEG00005019425-9861.224ENSEBUG00000014291puf60b8463.667Eptatretus_burgeri
ENSMZEG00005019425-9981.973ENSEASG00005009695PUF609981.391Equus_asinus_asinus
ENSMZEG00005019425-9981.973ENSECAG00000024681PUF609881.391Equus_caballus
ENSMZEG00005019425-10079.740ENSELUG00000006507puf60b10078.532Esox_lucius
ENSMZEG00005019425-10086.578ENSELUG00000018443-10086.578Esox_lucius
ENSMZEG00005019425-9981.973ENSFCAG00000001045PUF6010082.726Felis_catus
ENSMZEG00005019425-9971.727ENSFALG00000001136PUF609872.676Ficedula_albicollis
ENSMZEG00005019425-9982.163ENSFDAG00000017177PUF609382.163Fukomys_damarensis
ENSMZEG00005019425-9489.571ENSFHEG00000021687PUF6010089.958Fundulus_heteroclitus
ENSMZEG00005019425-10082.353ENSFHEG00000020046puf60b10083.463Fundulus_heteroclitus
ENSMZEG00005019425-9968.571ENSGMOG00000006392puf60b10069.333Gadus_morhua
ENSMZEG00005019425-6486.880ENSGALG00000039901PUF609486.880Gallus_gallus
ENSMZEG00005019425-10082.353ENSGAFG00000021040puf60b10083.463Gambusia_affinis
ENSMZEG00005019425-9885.938ENSGAFG00000004334-10085.547Gambusia_affinis
ENSMZEG00005019425-10076.281ENSGACG00000001484-10077.407Gasterosteus_aculeatus
ENSMZEG00005019425-9971.048ENSGACG00000004717puf60b9971.048Gasterosteus_aculeatus
ENSMZEG00005019425-9882.342ENSGAGG00000013289PUF609281.132Gopherus_agassizii
ENSMZEG00005019425-9981.784ENSGGOG00000004646PUF609981.391Gorilla_gorilla
ENSMZEG00005019425-10082.922ENSHBUG00000015118puf60b10083.658Haplochromis_burtoni
ENSMZEG00005019425-10099.808ENSHBUG00000009634-10099.808Haplochromis_burtoni
ENSMZEG00005019425-9982.163ENSHGLG00000006111PUF609382.163Heterocephalus_glaber_female
ENSMZEG00005019425-9982.163ENSHGLG00100012362PUF609382.163Heterocephalus_glaber_male
ENSMZEG00005019425-9673.161ENSHCOG00000000378-9970.265Hippocampus_comes
ENSMZEG00005019425-9880.187ENSHCOG00000015541puf60b10080.561Hippocampus_comes
ENSMZEG00005019425-9882.917ENSIPUG00000002453puf60a10082.726Ictalurus_punctatus
ENSMZEG00005019425-9878.220ENSIPUG00000004660puf60b10077.609Ictalurus_punctatus
ENSMZEG00005019425-9981.973ENSSTOG00000025037PUF609481.973Ictidomys_tridecemlineatus
ENSMZEG00005019425-9982.163ENSJJAG00000001076Puf609382.163Jaculus_jaculus
ENSMZEG00005019425-9885.441ENSKMAG00000010106-10085.441Kryptolebias_marmoratus
ENSMZEG00005019425-9883.268ENSKMAG00000016745puf60b10083.658Kryptolebias_marmoratus
ENSMZEG00005019425-9980.769ENSLBEG00000012505puf60b10080.769Labrus_bergylta
ENSMZEG00005019425-6878.689ENSLACG00000005456PUF609978.689Latimeria_chalumnae
ENSMZEG00005019425-10085.822ENSLOCG00000010106puf60b10085.822Lepisosteus_oculatus
ENSMZEG00005019425-9980.835ENSLAFG00000022929PUF609480.835Loxodonta_africana
ENSMZEG00005019425-9981.818ENSMFAG00000043373PUF609981.818Macaca_fascicularis
ENSMZEG00005019425-9981.784ENSMMUG00000013558PUF609981.391Macaca_mulatta
ENSMZEG00005019425-9981.784ENSMNEG00000031099PUF609981.203Macaca_nemestrina
ENSMZEG00005019425-9882.534ENSMLEG00000040009PUF6010082.534Mandrillus_leucophaeus
ENSMZEG00005019425-10094.646ENSMAMG00000019476-10094.646Mastacembelus_armatus
ENSMZEG00005019425-9982.917ENSMAMG00000010394puf60b10081.061Mastacembelus_armatus
ENSMZEG00005019425-9883.658ENSMZEG00005018515puf60b10083.658Maylandia_zebra
ENSMZEG00005019425-9981.321ENSMGAG00000013070PUF609587.209Meleagris_gallopavo
ENSMZEG00005019425-6885.246ENSMAUG00000014267-9085.246Mesocricetus_auratus
ENSMZEG00005019425-9366.270ENSMAUG00000018549-9566.337Mesocricetus_auratus
ENSMZEG00005019425-9981.973ENSMICG00000012226PUF609981.887Microcebus_murinus
ENSMZEG00005019425-9982.163ENSMOCG00000018780Puf609382.163Microtus_ochrogaster
ENSMZEG00005019425-9883.463ENSMMOG00000004217puf60b10083.463Mola_mola
ENSMZEG00005019425-9978.876ENSMMOG00000018059-9983.102Mola_mola
ENSMZEG00005019425-9981.404ENSMODG00000009161PUF609481.404Monodelphis_domestica
ENSMZEG00005019425-10075.712ENSMALG00000006797puf60b10075.712Monopterus_albus
ENSMZEG00005019425-10092.734ENSMALG00000000200-10092.161Monopterus_albus
ENSMZEG00005019425-9982.353MGP_CAROLIEiJ_G0019910Puf609382.353Mus_caroli
ENSMZEG00005019425-9982.353ENSMUSG00000002524Puf609382.353Mus_musculus
ENSMZEG00005019425-9982.353MGP_PahariEiJ_G0019920Puf609382.353Mus_pahari
ENSMZEG00005019425-9982.353MGP_SPRETEiJ_G0020812Puf609382.353Mus_spretus
ENSMZEG00005019425-9981.784ENSMPUG00000008137PUF609281.784Mustela_putorius_furo
ENSMZEG00005019425-9981.404ENSMLUG00000000238-9381.404Myotis_lucifugus
ENSMZEG00005019425-9976.271ENSMLUG00000013032-9976.271Myotis_lucifugus
ENSMZEG00005019425-9982.163ENSNGAG00000000712Puf6010082.917Nannospalax_galili
ENSMZEG00005019425-8380.580ENSNBRG00000013047puf60b9782.775Neolamprologus_brichardi
ENSMZEG00005019425-10099.234ENSNBRG00000017223-10099.234Neolamprologus_brichardi
ENSMZEG00005019425-9981.784ENSNLEG00000002156PUF609981.391Nomascus_leucogenys
ENSMZEG00005019425-7091.667ENSOPRG00000002147PUF607591.126Ochotona_princeps
ENSMZEG00005019425-7190.625ENSODEG00000014024-9090.625Octodon_degus
ENSMZEG00005019425-9561.736ENSODEG00000015513-9860.308Octodon_degus
ENSMZEG00005019425-10098.851ENSONIG00000014030-9998.851Oreochromis_niloticus
ENSMZEG00005019425-9983.462ENSONIG00000006247puf60b9883.462Oreochromis_niloticus
ENSMZEG00005019425-9766.406ENSOANG00000006962PUF609967.059Ornithorhynchus_anatinus
ENSMZEG00005019425-10082.543ENSORLG00000012279puf60b10083.268Oryzias_latipes
ENSMZEG00005019425-9888.155ENSORLG00000028655-9988.155Oryzias_latipes
ENSMZEG00005019425-10082.543ENSORLG00020007333puf6010083.268Oryzias_latipes_hni
ENSMZEG00005019425-9989.101ENSORLG00020018144-9989.101Oryzias_latipes_hni
ENSMZEG00005019425-9988.910ENSORLG00015016833-9988.910Oryzias_latipes_hsok
ENSMZEG00005019425-10082.987ENSORLG00015007718puf60b10083.721Oryzias_latipes_hsok
ENSMZEG00005019425-9989.866ENSOMEG00000022185-9989.866Oryzias_melastigma
ENSMZEG00005019425-10080.855ENSOMEG00000001643puf60b9981.967Oryzias_melastigma
ENSMZEG00005019425-9981.973ENSOGAG00000006259PUF609381.973Otolemur_garnettii
ENSMZEG00005019425-9980.344ENSOARG00000016235PUF609880.344Ovis_aries
ENSMZEG00005019425-9981.784ENSPPAG00000029933PUF609981.238Pan_paniscus
ENSMZEG00005019425-9981.973ENSPPRG00000003257PUF6010082.726Panthera_pardus
ENSMZEG00005019425-9979.550ENSPTIG00000009795PUF609979.550Panthera_tigris_altaica
ENSMZEG00005019425-9981.784ENSPTRG00000020670PUF609981.238Pan_troglodytes
ENSMZEG00005019425-9981.784ENSPTRG00000043963-9981.391Pan_troglodytes
ENSMZEG00005019425-9981.784ENSPANG00000021936PUF609981.203Papio_anubis
ENSMZEG00005019425-10085.472ENSPKIG00000004295puf60a10090.476Paramormyrops_kingsleyae
ENSMZEG00005019425-10084.280ENSPKIG00000012204puf60b10085.049Paramormyrops_kingsleyae
ENSMZEG00005019425-9981.594ENSPSIG00000004679PUF609981.973Pelodiscus_sinensis
ENSMZEG00005019425-9882.534ENSPMGG00000013444puf60b10082.115Periophthalmus_magnuspinnatus
ENSMZEG00005019425-9982.163ENSPEMG00000008820Puf609382.163Peromyscus_maniculatus_bairdii
ENSMZEG00005019425-10081.086ENSPCIG00000020270PUF609882.726Phascolarctos_cinereus
ENSMZEG00005019425-10082.353ENSPFOG00000019217puf60b9980.769Poecilia_formosa
ENSMZEG00005019425-10088.359ENSPFOG00000011118-10088.168Poecilia_formosa
ENSMZEG00005019425-9883.074ENSPLAG00000010754puf60b10083.463Poecilia_latipinna
ENSMZEG00005019425-10088.168ENSPLAG00000017025-9287.977Poecilia_latipinna
ENSMZEG00005019425-10088.740ENSPMEG00000009767-9288.550Poecilia_mexicana
ENSMZEG00005019425-10082.353ENSPMEG00000000838puf60b10083.463Poecilia_mexicana
ENSMZEG00005019425-10079.667ENSPREG00000005440puf60b10080.037Poecilia_reticulata
ENSMZEG00005019425-7980.048ENSPPYG00000018951-9580.523Pongo_abelii
ENSMZEG00005019425-7981.517ENSPCAG00000014837PUF6010081.991Procavia_capensis
ENSMZEG00005019425-9981.784ENSPCOG00000027981PUF609981.664Propithecus_coquereli
ENSMZEG00005019425-9891.139ENSPVAG00000016167PUF608191.139Pteropus_vampyrus
ENSMZEG00005019425-100100.000ENSPNYG00000004273-100100.000Pundamilia_nyererei
ENSMZEG00005019425-9883.658ENSPNYG00000002556puf60b10083.658Pundamilia_nyererei
ENSMZEG00005019425-9882.171ENSPNAG00000019909puf60a9982.625Pygocentrus_nattereri
ENSMZEG00005019425-9976.000ENSPNAG00000019415puf60b9175.287Pygocentrus_nattereri
ENSMZEG00005019425-9982.353ENSRNOG00000009960Puf609382.353Rattus_norvegicus
ENSMZEG00005019425-9981.784ENSRBIG00000035274PUF609981.391Rhinopithecus_bieti
ENSMZEG00005019425-9981.784ENSRROG00000029360PUF609981.784Rhinopithecus_roxellana
ENSMZEG00005019425-9980.835ENSSBOG00000027089PUF609979.925Saimiri_boliviensis_boliviensis
ENSMZEG00005019425-8881.953ENSSHAG00000006668PUF608981.953Sarcophilus_harrisii
ENSMZEG00005019425-10079.747ENSSFOG00015019371puf60a9885.743Scleropages_formosus
ENSMZEG00005019425-9879.238ENSSFOG00015019619puf60b9982.424Scleropages_formosus
ENSMZEG00005019425-7489.273ENSSMAG00000016381puf60b7888.889Scophthalmus_maximus
ENSMZEG00005019425-9795.257ENSSDUG00000007048-9795.059Seriola_dumerili
ENSMZEG00005019425-9981.733ENSSDUG00000009935puf60b9982.377Seriola_dumerili
ENSMZEG00005019425-9891.797ENSSLDG00000007366-10091.602Seriola_lalandi_dorsalis
ENSMZEG00005019425-9982.197ENSSLDG00000024011puf60b10081.439Seriola_lalandi_dorsalis
ENSMZEG00005019425-6375.516ENSSPUG00000013518PUF609275.516Sphenodon_punctatus
ENSMZEG00005019425-10080.407ENSSPAG00000012144puf60b10081.629Stegastes_partitus
ENSMZEG00005019425-9893.922ENSSPAG00000020285-10093.922Stegastes_partitus
ENSMZEG00005019425-9882.150ENSSSCG00000038800PUF609978.947Sus_scrofa
ENSMZEG00005019425-9980.989ENSTGUG00000012797-10080.534Taeniopygia_guttata
ENSMZEG00005019425-9983.654ENSTRUG00000005420puf60b10081.629Takifugu_rubripes
ENSMZEG00005019425-9886.248ENSTRUG00000008843-10085.658Takifugu_rubripes
ENSMZEG00005019425-9983.462ENSTNIG00000013675puf60b9983.462Tetraodon_nigroviridis
ENSMZEG00005019425-9985.437ENSTNIG00000003069-9985.631Tetraodon_nigroviridis
ENSMZEG00005019425-5682.450ENSTBEG00000002751-9982.450Tupaia_belangeri
ENSMZEG00005019425-7566.952ENSTBEG00000001899-10067.521Tupaia_belangeri
ENSMZEG00005019425-9880.769ENSTTRG00000017088PUF6010082.150Tursiops_truncatus
ENSMZEG00005019425-9981.973ENSUAMG00000024917PUF609981.391Ursus_americanus
ENSMZEG00005019425-9977.419ENSUMAG00000000272PUF609377.040Ursus_maritimus
ENSMZEG00005019425-9981.973ENSVVUG00000022527PUF6010082.726Vulpes_vulpes
ENSMZEG00005019425-9880.998ENSXETG00000012469puf609780.998Xenopus_tropicalis
ENSMZEG00005019425-9880.545ENSXCOG00000012355puf60b10080.934Xiphophorus_couchianus
ENSMZEG00005019425-10082.353ENSXMAG00000001862puf60b10083.463Xiphophorus_maculatus
ENSMZEG00005019425-9984.393ENSXMAG00000010507-9984.008Xiphophorus_maculatus

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