EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005019475 (Gene tree)
Gene ID: 101481437
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 8860 bases
Position: chrLG18:207622-216481
Accession: 101481437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005026109	Ribonuc_P_40	PF08584.11	6.8e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005026950	-	1473	XM_004572443	ENSMZEP00005026109	350 (aa)	XP_004572500	UPI000329762E

Gene Model

Click here to download ENSMZEG00005019475's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005019475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005019475	rpp40	99	39.058	ENSG00000124787	RPP40	99	39.404	Homo_sapiens
ENSMZEG00005019475	rpp40	89	63.548	ENSAPOG00000008660	rpp40	92	63.548	Acanthochromis_polyacanthus
ENSMZEG00005019475	rpp40	99	39.335	ENSAMEG00000012938	RPP40	99	39.335	Ailuropoda_melanoleuca
ENSMZEG00005019475	rpp40	100	77.429	ENSACIG00000003617	rpp40	99	77.429	Amphilophus_citrinellus
ENSMZEG00005019475	rpp40	99	76.437	ENSAOCG00000011846	rpp40	99	76.437	Amphiprion_ocellaris
ENSMZEG00005019475	rpp40	99	76.437	ENSAPEG00000001322	rpp40	99	76.437	Amphiprion_percula
ENSMZEG00005019475	rpp40	99	72.000	ENSATEG00000006584	rpp40	99	72.000	Anabas_testudineus
ENSMZEG00005019475	rpp40	83	39.735	ENSAPLG00000005691	RPP40	99	39.735	Anas_platyrhynchos
ENSMZEG00005019475	rpp40	98	38.483	ENSACAG00000006550	RPP40	87	38.483	Anolis_carolinensis
ENSMZEG00005019475	rpp40	99	37.396	ENSANAG00000029246	RPP40	99	37.396	Aotus_nancymaae
ENSMZEG00005019475	rpp40	98	100.000	ENSACLG00000015883	rpp40	97	100.000	Astatotilapia_calliptera
ENSMZEG00005019475	rpp40	99	47.059	ENSAMXG00000001755	rpp40	99	47.059	Astyanax_mexicanus
ENSMZEG00005019475	rpp40	99	40.443	ENSBTAG00000003332	RPP40	99	40.443	Bos_taurus
ENSMZEG00005019475	rpp40	99	38.504	ENSCJAG00000021373	RPP40	99	38.504	Callithrix_jacchus
ENSMZEG00005019475	rpp40	99	39.058	ENSCAFG00000009435	RPP40	99	39.058	Canis_familiaris
ENSMZEG00005019475	rpp40	99	39.058	ENSCAFG00020013380	RPP40	99	39.058	Canis_lupus_dingo
ENSMZEG00005019475	rpp40	99	38.889	ENSCHIG00000016849	RPP40	99	39.667	Capra_hircus
ENSMZEG00005019475	rpp40	99	37.950	ENSTSYG00000032857	RPP40	99	37.950	Carlito_syrichta
ENSMZEG00005019475	rpp40	89	35.404	ENSCAPG00000004957	RPP40	96	35.404	Cavia_aperea
ENSMZEG00005019475	rpp40	99	39.216	ENSCPOG00000005855	RPP40	98	39.216	Cavia_porcellus
ENSMZEG00005019475	rpp40	99	38.504	ENSCCAG00000019809	RPP40	99	38.504	Cebus_capucinus
ENSMZEG00005019475	rpp40	99	38.781	ENSCATG00000038787	RPP40	99	38.781	Cercocebus_atys
ENSMZEG00005019475	rpp40	99	38.655	ENSCLAG00000003235	RPP40	98	38.655	Chinchilla_lanigera
ENSMZEG00005019475	rpp40	99	39.058	ENSCSAG00000007307	RPP40	99	39.058	Chlorocebus_sabaeus
ENSMZEG00005019475	rpp40	54	46.667	ENSCHOG00000005856	-	76	46.667	Choloepus_hoffmanni
ENSMZEG00005019475	rpp40	99	40.056	ENSCPBG00000009003	RPP40	98	40.056	Chrysemys_picta_bellii
ENSMZEG00005019475	rpp40	99	38.227	ENSCANG00000033965	RPP40	99	38.227	Colobus_angolensis_palliatus
ENSMZEG00005019475	rpp40	98	37.006	ENSCGRG00001018328	Rpp40	98	37.006	Cricetulus_griseus_chok1gshd
ENSMZEG00005019475	rpp40	98	37.006	ENSCGRG00000011344	Rpp40	98	37.006	Cricetulus_griseus_crigri
ENSMZEG00005019475	rpp40	99	57.429	ENSCSEG00000015006	-	99	58.000	Cynoglossus_semilaevis
ENSMZEG00005019475	rpp40	73	55.172	ENSCVAG00000012169	rpp40	100	55.939	Cyprinodon_variegatus
ENSMZEG00005019475	rpp40	99	48.889	ENSDARG00000017605	rpp40	99	48.889	Danio_rerio
ENSMZEG00005019475	rpp40	81	35.593	ENSDNOG00000048136	RPP40	99	35.593	Dasypus_novemcinctus
ENSMZEG00005019475	rpp40	99	37.950	ENSDORG00000029944	-	99	37.950	Dipodomys_ordii
ENSMZEG00005019475	rpp40	99	32.527	ENSDORG00000011196	-	99	32.258	Dipodomys_ordii
ENSMZEG00005019475	rpp40	99	31.111	ENSETEG00000007458	RPP40	99	31.111	Echinops_telfairi
ENSMZEG00005019475	rpp40	98	37.465	ENSEBUG00000000386	rpp40	99	38.006	Eptatretus_burgeri
ENSMZEG00005019475	rpp40	99	39.335	ENSEASG00005012116	RPP40	80	39.335	Equus_asinus_asinus
ENSMZEG00005019475	rpp40	99	39.612	ENSECAG00000017247	RPP40	80	39.612	Equus_caballus
ENSMZEG00005019475	rpp40	56	38.835	ENSEEUG00000012087	RPP40	70	38.835	Erinaceus_europaeus
ENSMZEG00005019475	rpp40	99	51.541	ENSELUG00000017004	rpp40	99	51.541	Esox_lucius
ENSMZEG00005019475	rpp40	99	38.781	ENSFCAG00000009249	RPP40	99	38.781	Felis_catus
ENSMZEG00005019475	rpp40	85	39.692	ENSFALG00000013166	RPP40	99	39.692	Ficedula_albicollis
ENSMZEG00005019475	rpp40	99	38.375	ENSFDAG00000013001	-	98	38.375	Fukomys_damarensis
ENSMZEG00005019475	rpp40	80	33.448	ENSFDAG00000000265	-	99	33.448	Fukomys_damarensis
ENSMZEG00005019475	rpp40	99	68.300	ENSFHEG00000021429	rpp40	89	68.300	Fundulus_heteroclitus
ENSMZEG00005019475	rpp40	89	44.828	ENSGMOG00000018653	rpp40	100	44.828	Gadus_morhua
ENSMZEG00005019475	rpp40	99	39.437	ENSGALG00000036074	RPP40	98	39.437	Gallus_gallus
ENSMZEG00005019475	rpp40	83	54.983	ENSGAFG00000004189	-	100	54.983	Gambusia_affinis
ENSMZEG00005019475	rpp40	99	70.571	ENSGACG00000002472	rpp40	99	70.571	Gasterosteus_aculeatus
ENSMZEG00005019475	rpp40	99	40.616	ENSGAGG00000012918	RPP40	98	40.616	Gopherus_agassizii
ENSMZEG00005019475	rpp40	99	39.058	ENSGGOG00000013764	RPP40	99	39.058	Gorilla_gorilla
ENSMZEG00005019475	rpp40	89	93.891	ENSHBUG00000009378	rpp40	92	93.891	Haplochromis_burtoni
ENSMZEG00005019475	rpp40	99	39.776	ENSHGLG00000004871	RPP40	98	39.776	Heterocephalus_glaber_female
ENSMZEG00005019475	rpp40	99	39.776	ENSHGLG00100002080	RPP40	98	39.776	Heterocephalus_glaber_male
ENSMZEG00005019475	rpp40	97	50.578	ENSHCOG00000013264	-	94	50.578	Hippocampus_comes
ENSMZEG00005019475	rpp40	99	48.315	ENSIPUG00000008951	RPP40	99	48.315	Ictalurus_punctatus
ENSMZEG00005019475	rpp40	99	39.058	ENSSTOG00000011199	RPP40	99	39.058	Ictidomys_tridecemlineatus
ENSMZEG00005019475	rpp40	99	40.000	ENSJJAG00000020629	Rpp40	99	40.000	Jaculus_jaculus
ENSMZEG00005019475	rpp40	99	74.352	ENSKMAG00000019358	rpp40	99	74.352	Kryptolebias_marmoratus
ENSMZEG00005019475	rpp40	99	75.000	ENSLBEG00000022724	rpp40	99	75.000	Labrus_bergylta
ENSMZEG00005019475	rpp40	99	40.616	ENSLACG00000014848	RPP40	99	40.616	Latimeria_chalumnae
ENSMZEG00005019475	rpp40	99	45.125	ENSLOCG00000011650	rpp40	99	45.125	Lepisosteus_oculatus
ENSMZEG00005019475	rpp40	82	41.611	ENSLAFG00000007530	RPP40	98	41.611	Loxodonta_africana
ENSMZEG00005019475	rpp40	99	38.504	ENSMFAG00000043100	RPP40	99	38.504	Macaca_fascicularis
ENSMZEG00005019475	rpp40	99	38.504	ENSMMUG00000004966	RPP40	99	38.504	Macaca_mulatta
ENSMZEG00005019475	rpp40	99	38.504	ENSMNEG00000041986	RPP40	99	38.504	Macaca_nemestrina
ENSMZEG00005019475	rpp40	99	33.894	ENSMLEG00000040851	RPP40	100	33.894	Mandrillus_leucophaeus
ENSMZEG00005019475	rpp40	99	75.287	ENSMAMG00000019551	rpp40	99	75.287	Mastacembelus_armatus
ENSMZEG00005019475	rpp40	89	41.615	ENSMGAG00000004009	RPP40	89	41.615	Meleagris_gallopavo
ENSMZEG00005019475	rpp40	99	37.950	ENSMAUG00000010268	Rpp40	99	37.950	Mesocricetus_auratus
ENSMZEG00005019475	rpp40	99	40.997	ENSMICG00000003297	RPP40	99	37.883	Microcebus_murinus
ENSMZEG00005019475	rpp40	99	39.889	ENSMOCG00000000305	Rpp40	99	39.889	Microtus_ochrogaster
ENSMZEG00005019475	rpp40	99	58.333	ENSMMOG00000020591	-	99	57.471	Mola_mola
ENSMZEG00005019475	rpp40	99	37.845	ENSMODG00000009826	RPP40	99	37.845	Monodelphis_domestica
ENSMZEG00005019475	rpp40	99	77.011	ENSMALG00000020133	rpp40	99	77.632	Monopterus_albus
ENSMZEG00005019475	rpp40	99	39.335	MGP_CAROLIEiJ_G0018429	Rpp40	99	39.335	Mus_caroli
ENSMZEG00005019475	rpp40	99	39.335	ENSMUSG00000021418	Rpp40	99	39.335	Mus_musculus
ENSMZEG00005019475	rpp40	99	39.889	MGP_PahariEiJ_G0019497	Rpp40	99	39.889	Mus_pahari
ENSMZEG00005019475	rpp40	99	39.335	MGP_SPRETEiJ_G0019309	Rpp40	99	39.335	Mus_spretus
ENSMZEG00005019475	rpp40	99	39.058	ENSMPUG00000000530	RPP40	93	39.058	Mustela_putorius_furo
ENSMZEG00005019475	rpp40	99	40.997	ENSMLUG00000000501	RPP40	99	40.997	Myotis_lucifugus
ENSMZEG00005019475	rpp40	99	38.936	ENSNGAG00000023955	-	98	38.936	Nannospalax_galili
ENSMZEG00005019475	rpp40	94	36.095	ENSNGAG00000022529	-	98	36.095	Nannospalax_galili
ENSMZEG00005019475	rpp40	89	89.206	ENSNBRG00000017465	rpp40	86	89.206	Neolamprologus_brichardi
ENSMZEG00005019475	rpp40	99	38.781	ENSNLEG00000034397	RPP40	99	38.781	Nomascus_leucogenys
ENSMZEG00005019475	rpp40	99	33.795	ENSMEUG00000005300	RPP40	99	33.795	Notamacropus_eugenii
ENSMZEG00005019475	rpp40	99	37.396	ENSODEG00000018153	-	99	37.396	Octodon_degus
ENSMZEG00005019475	rpp40	89	35.404	ENSODEG00000006170	-	100	35.404	Octodon_degus
ENSMZEG00005019475	rpp40	99	38.936	ENSODEG00000007255	-	98	38.936	Octodon_degus
ENSMZEG00005019475	rpp40	100	96.571	ENSONIG00000014016	rpp40	99	96.571	Oreochromis_niloticus
ENSMZEG00005019475	rpp40	82	41.137	ENSOANG00000001200	RPP40	98	41.137	Ornithorhynchus_anatinus
ENSMZEG00005019475	rpp40	99	39.833	ENSOCUG00000000354	RPP40	99	39.833	Oryctolagus_cuniculus
ENSMZEG00005019475	rpp40	99	70.520	ENSORLG00000008242	-	99	70.520	Oryzias_latipes
ENSMZEG00005019475	rpp40	99	71.098	ENSORLG00020013745	-	90	71.098	Oryzias_latipes_hni
ENSMZEG00005019475	rpp40	99	70.520	ENSORLG00015000887	-	99	70.520	Oryzias_latipes_hsok
ENSMZEG00005019475	rpp40	99	71.676	ENSOMEG00000002747	rpp40	99	71.676	Oryzias_melastigma
ENSMZEG00005019475	rpp40	99	39.612	ENSOGAG00000006055	RPP40	99	39.612	Otolemur_garnettii
ENSMZEG00005019475	rpp40	90	39.577	ENSOARG00000018783	RPP40	99	40.333	Ovis_aries
ENSMZEG00005019475	rpp40	99	39.216	ENSPPAG00000023703	RPP40	98	39.216	Pan_paniscus
ENSMZEG00005019475	rpp40	99	38.781	ENSPPRG00000005612	RPP40	99	38.781	Panthera_pardus
ENSMZEG00005019475	rpp40	99	36.517	ENSPTIG00000018847	RPP40	99	36.517	Panthera_tigris_altaica
ENSMZEG00005019475	rpp40	99	38.781	ENSPTRG00000017690	RPP40	99	38.781	Pan_troglodytes
ENSMZEG00005019475	rpp40	99	38.781	ENSPANG00000017865	RPP40	99	38.781	Papio_anubis
ENSMZEG00005019475	rpp40	99	45.378	ENSPKIG00000006311	rpp40	99	45.378	Paramormyrops_kingsleyae
ENSMZEG00005019475	rpp40	60	39.819	ENSPSIG00000007854	RPP40	99	39.819	Pelodiscus_sinensis
ENSMZEG00005019475	rpp40	80	36.860	ENSPEMG00000020809	Rpp40	85	36.177	Peromyscus_maniculatus_bairdii
ENSMZEG00005019475	rpp40	75	39.855	ENSPMAG00000008412	rpp40	99	39.493	Petromyzon_marinus
ENSMZEG00005019475	rpp40	99	37.119	ENSPCIG00000010682	RPP40	99	37.119	Phascolarctos_cinereus
ENSMZEG00005019475	rpp40	99	63.037	ENSPFOG00000011460	rpp40	99	63.037	Poecilia_formosa
ENSMZEG00005019475	rpp40	99	62.248	ENSPLAG00000001334	rpp40	99	62.248	Poecilia_latipinna
ENSMZEG00005019475	rpp40	99	63.401	ENSPMEG00000007721	rpp40	99	63.401	Poecilia_mexicana
ENSMZEG00005019475	rpp40	99	63.689	ENSPREG00000009215	rpp40	99	63.689	Poecilia_reticulata
ENSMZEG00005019475	rpp40	99	39.058	ENSPPYG00000016194	RPP40	99	39.058	Pongo_abelii
ENSMZEG00005019475	rpp40	53	40.217	ENSPCAG00000002700	-	99	40.217	Procavia_capensis
ENSMZEG00005019475	rpp40	99	39.335	ENSPCOG00000003907	RPP40	99	39.335	Propithecus_coquereli
ENSMZEG00005019475	rpp40	99	38.504	ENSPVAG00000011325	RPP40	99	38.504	Pteropus_vampyrus
ENSMZEG00005019475	rpp40	83	92.440	ENSPNYG00000004432	rpp40	100	92.440	Pundamilia_nyererei
ENSMZEG00005019475	rpp40	99	46.111	ENSPNAG00000019125	rpp40	99	46.111	Pygocentrus_nattereri
ENSMZEG00005019475	rpp40	99	39.889	ENSRNOG00000016226	Rpp40	99	39.889	Rattus_norvegicus
ENSMZEG00005019475	rpp40	99	37.950	ENSRBIG00000035800	RPP40	99	37.950	Rhinopithecus_bieti
ENSMZEG00005019475	rpp40	99	37.950	ENSRROG00000039116	RPP40	99	37.950	Rhinopithecus_roxellana
ENSMZEG00005019475	rpp40	99	38.504	ENSSBOG00000020297	RPP40	99	38.504	Saimiri_boliviensis_boliviensis
ENSMZEG00005019475	rpp40	75	39.416	ENSSHAG00000002102	RPP40	99	39.416	Sarcophilus_harrisii
ENSMZEG00005019475	rpp40	99	49.441	ENSSFOG00015001142	rpp40	81	49.441	Scleropages_formosus
ENSMZEG00005019475	rpp40	99	75.921	ENSSDUG00000007202	rpp40	99	75.921	Seriola_dumerili
ENSMZEG00005019475	rpp40	99	75.637	ENSSLDG00000017563	rpp40	99	75.637	Seriola_lalandi_dorsalis
ENSMZEG00005019475	rpp40	81	36.271	ENSSPUG00000018950	-	100	36.271	Sphenodon_punctatus
ENSMZEG00005019475	rpp40	99	39.216	ENSSPUG00000017487	-	98	39.216	Sphenodon_punctatus
ENSMZEG00005019475	rpp40	99	76.149	ENSSPAG00000022716	rpp40	99	76.149	Stegastes_partitus
ENSMZEG00005019475	rpp40	99	40.997	ENSSSCG00000000998	RPP40	99	42.193	Sus_scrofa
ENSMZEG00005019475	rpp40	99	40.782	ENSTGUG00000002258	-	100	40.782	Taeniopygia_guttata
ENSMZEG00005019475	rpp40	99	71.023	ENSTRUG00000003755	rpp40	99	71.023	Takifugu_rubripes
ENSMZEG00005019475	rpp40	99	66.667	ENSTNIG00000003077	rpp40	99	66.667	Tetraodon_nigroviridis
ENSMZEG00005019475	rpp40	99	35.574	ENSTTRG00000007319	RPP40	99	35.574	Tursiops_truncatus
ENSMZEG00005019475	rpp40	99	39.058	ENSUAMG00000002159	RPP40	98	40.268	Ursus_americanus
ENSMZEG00005019475	rpp40	99	39.058	ENSUMAG00000018639	RPP40	93	39.058	Ursus_maritimus
ENSMZEG00005019475	rpp40	99	38.781	ENSVVUG00000005451	RPP40	99	38.781	Vulpes_vulpes
ENSMZEG00005019475	rpp40	99	39.665	ENSXETG00000017617	rpp40	99	39.665	Xenopus_tropicalis
ENSMZEG00005019475	rpp40	99	46.629	ENSXMAG00000024940	rpp40	99	47.059	Xiphophorus_maculatus