EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005019482 (Gene tree)
Gene ID: 101487538
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 15593 bases
Position: chrLG18:229223-244815
Accession: 101487538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005026117	RIO1	PF01163.22	2.7e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005026959	-	2196	XM_024806183	ENSMZEP00005026117	541 (aa)	XP_024661951	UPI000D314211

Gene Model

Click here to download ENSMZEG00005019482's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005019482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005019482	riok1	99	66.489	ENSG00000124784	RIOK1	99	66.489	Homo_sapiens
ENSMZEG00005019482	riok1	57	84.790	ENSAPOG00000015632	riok1	99	84.466	Acanthochromis_polyacanthus
ENSMZEG00005019482	riok1	99	67.434	ENSAMEG00000017367	RIOK1	99	66.903	Ailuropoda_melanoleuca
ENSMZEG00005019482	riok1	90	89.980	ENSACIG00000003735	riok1	89	90.349	Amphilophus_citrinellus
ENSMZEG00005019482	riok1	99	82.051	ENSAOCG00000011818	riok1	99	81.868	Amphiprion_ocellaris
ENSMZEG00005019482	riok1	99	81.868	ENSAPEG00000001345	riok1	99	81.685	Amphiprion_percula
ENSMZEG00005019482	riok1	83	86.253	ENSATEG00000006594	riok1	99	86.253	Anabas_testudineus
ENSMZEG00005019482	riok1	85	74.364	ENSAPLG00000004196	RIOK1	100	74.364	Anas_platyrhynchos
ENSMZEG00005019482	riok1	99	66.135	ENSACAG00000000695	RIOK1	99	66.548	Anolis_carolinensis
ENSMZEG00005019482	riok1	99	57.549	ENSANAG00000023777	RIOK1	98	57.371	Aotus_nancymaae
ENSMZEG00005019482	riok1	100	99.630	ENSACLG00000015799	riok1	100	99.630	Astatotilapia_calliptera
ENSMZEG00005019482	riok1	99	70.506	ENSAMXG00000015286	riok1	98	70.629	Astyanax_mexicanus
ENSMZEG00005019482	riok1	99	66.844	ENSBTAG00000013821	RIOK1	99	65.542	Bos_taurus
ENSMZEG00005019482	riok1	79	48.222	WBGene00019698	riok-1	85	48.222	Caenorhabditis_elegans
ENSMZEG00005019482	riok1	85	72.956	ENSCJAG00000042960	RIOK1	99	65.836	Callithrix_jacchus
ENSMZEG00005019482	riok1	85	74.423	ENSCAFG00000009563	RIOK1	99	66.903	Canis_familiaris
ENSMZEG00005019482	riok1	78	75.878	ENSCAFG00020013233	RIOK1	86	69.897	Canis_lupus_dingo
ENSMZEG00005019482	riok1	99	66.489	ENSCHIG00000001534	RIOK1	99	65.719	Capra_hircus
ENSMZEG00005019482	riok1	67	70.557	ENSTSYG00000011368	RIOK1	100	69.725	Carlito_syrichta
ENSMZEG00005019482	riok1	80	73.497	ENSCAPG00000008489	RIOK1	99	73.002	Cavia_aperea
ENSMZEG00005019482	riok1	97	66.423	ENSCPOG00000009882	RIOK1	99	67.080	Cavia_porcellus
ENSMZEG00005019482	riok1	99	66.011	ENSCCAG00000024061	RIOK1	99	66.252	Cebus_capucinus
ENSMZEG00005019482	riok1	85	74.214	ENSCATG00000001548	RIOK1	99	66.370	Cercocebus_atys
ENSMZEG00005019482	riok1	99	66.726	ENSCLAG00000003522	RIOK1	99	66.667	Chinchilla_lanigera
ENSMZEG00005019482	riok1	92	66.471	ENSCSAG00000007396	RIOK1	89	69.358	Chlorocebus_sabaeus
ENSMZEG00005019482	riok1	92	69.790	ENSCPBG00000008685	RIOK1	82	73.013	Chrysemys_picta_bellii
ENSMZEG00005019482	riok1	99	66.726	ENSCANG00000032919	RIOK1	99	66.075	Colobus_angolensis_palliatus
ENSMZEG00005019482	riok1	99	65.426	ENSCGRG00001018868	Riok1	98	64.007	Cricetulus_griseus_chok1gshd
ENSMZEG00005019482	riok1	99	65.426	ENSCGRG00000008015	Riok1	98	64.007	Cricetulus_griseus_crigri
ENSMZEG00005019482	riok1	90	57.895	ENSCSEG00000015014	riok1	88	57.692	Cynoglossus_semilaevis
ENSMZEG00005019482	riok1	57	74.769	ENSCVAG00000011291	riok1	99	76.527	Cyprinodon_variegatus
ENSMZEG00005019482	riok1	99	71.403	ENSDARG00000016399	riok1	99	72.645	Danio_rerio
ENSMZEG00005019482	riok1	85	72.651	ENSDNOG00000015813	RIOK1	99	64.522	Dasypus_novemcinctus
ENSMZEG00005019482	riok1	99	66.078	ENSDORG00000008530	Riok1	99	66.254	Dipodomys_ordii
ENSMZEG00005019482	riok1	84	50.305	FBgn0036187	RIOK1	85	50.881	Drosophila_melanogaster
ENSMZEG00005019482	riok1	100	66.018	ENSETEG00000020273	RIOK1	99	66.904	Echinops_telfairi
ENSMZEG00005019482	riok1	99	58.348	ENSEBUG00000013672	riok1	98	59.964	Eptatretus_burgeri
ENSMZEG00005019482	riok1	92	64.808	ENSEASG00005012032	RIOK1	85	69.421	Equus_asinus_asinus
ENSMZEG00005019482	riok1	99	65.263	ENSECAG00000009007	RIOK1	99	66.135	Equus_caballus
ENSMZEG00005019482	riok1	77	62.736	ENSEEUG00000007123	RIOK1	90	65.909	Erinaceus_europaeus
ENSMZEG00005019482	riok1	100	71.403	ENSELUG00000017029	riok1	100	71.712	Esox_lucius
ENSMZEG00005019482	riok1	99	66.904	ENSFCAG00000027290	RIOK1	99	66.259	Felis_catus
ENSMZEG00005019482	riok1	100	67.434	ENSFALG00000013244	RIOK1	99	67.972	Ficedula_albicollis
ENSMZEG00005019482	riok1	85	72.537	ENSFDAG00000019139	RIOK1	99	65.487	Fukomys_damarensis
ENSMZEG00005019482	riok1	83	82.927	ENSFHEG00000021419	riok1	99	92.308	Fundulus_heteroclitus
ENSMZEG00005019482	riok1	76	77.053	ENSGMOG00000018668	riok1	96	77.053	Gadus_morhua
ENSMZEG00005019482	riok1	58	69.231	ENSGALG00000012795	RIOK1	100	69.922	Gallus_gallus
ENSMZEG00005019482	riok1	85	69.330	ENSGAFG00000004091	riok1	79	69.978	Gambusia_affinis
ENSMZEG00005019482	riok1	97	78.343	ENSGACG00000002496	riok1	95	86.270	Gasterosteus_aculeatus
ENSMZEG00005019482	riok1	76	77.427	ENSGAGG00000002262	RIOK1	96	71.335	Gopherus_agassizii
ENSMZEG00005019482	riok1	99	57.923	ENSGGOG00000011037	RIOK1	78	68.170	Gorilla_gorilla
ENSMZEG00005019482	riok1	85	72.727	ENSHGLG00000008699	RIOK1	99	65.771	Heterocephalus_glaber_female
ENSMZEG00005019482	riok1	99	65.954	ENSHGLG00100008188	RIOK1	99	63.333	Heterocephalus_glaber_male
ENSMZEG00005019482	riok1	90	79.192	ENSHCOG00000013275	riok1	92	79.192	Hippocampus_comes
ENSMZEG00005019482	riok1	99	69.123	ENSIPUG00000003290	riok1	99	70.877	Ictalurus_punctatus
ENSMZEG00005019482	riok1	99	66.431	ENSSTOG00000009289	RIOK1	99	65.664	Ictidomys_tridecemlineatus
ENSMZEG00005019482	riok1	99	67.145	ENSJJAG00000015152	Riok1	99	66.548	Jaculus_jaculus
ENSMZEG00005019482	riok1	72	84.833	ENSKMAG00000019378	riok1	100	84.833	Kryptolebias_marmoratus
ENSMZEG00005019482	riok1	90	83.603	ENSLBEG00000016650	riok1	87	85.628	Labrus_bergylta
ENSMZEG00005019482	riok1	99	59.894	ENSLACG00000000300	RIOK1	99	60.106	Latimeria_chalumnae
ENSMZEG00005019482	riok1	99	72.518	ENSLOCG00000011728	riok1	99	72.212	Lepisosteus_oculatus
ENSMZEG00005019482	riok1	99	67.145	ENSLAFG00000005504	RIOK1	99	66.909	Loxodonta_africana
ENSMZEG00005019482	riok1	99	67.084	ENSMFAG00000029990	RIOK1	99	66.370	Macaca_fascicularis
ENSMZEG00005019482	riok1	99	66.905	ENSMMUG00000015577	RIOK1	99	66.192	Macaca_mulatta
ENSMZEG00005019482	riok1	99	64.222	ENSMNEG00000034396	RIOK1	97	68.559	Macaca_nemestrina
ENSMZEG00005019482	riok1	85	74.004	ENSMLEG00000026327	RIOK1	99	66.192	Mandrillus_leucophaeus
ENSMZEG00005019482	riok1	99	80.037	ENSMAMG00000019557	riok1	99	82.051	Mastacembelus_armatus
ENSMZEG00005019482	riok1	99	68.223	ENSMGAG00000003816	RIOK1	98	68.402	Meleagris_gallopavo
ENSMZEG00005019482	riok1	99	65.714	ENSMAUG00000012751	Riok1	98	65.357	Mesocricetus_auratus
ENSMZEG00005019482	riok1	99	66.961	ENSMICG00000044301	RIOK1	83	67.314	Microcebus_murinus
ENSMZEG00005019482	riok1	99	64.748	ENSMOCG00000017032	Riok1	98	63.327	Microtus_ochrogaster
ENSMZEG00005019482	riok1	85	75.304	ENSMMOG00000020598	riok1	87	75.709	Mola_mola
ENSMZEG00005019482	riok1	99	65.897	ENSMODG00000009964	RIOK1	99	65.542	Monodelphis_domestica
ENSMZEG00005019482	riok1	90	77.207	ENSMALG00000019982	riok1	92	77.207	Monopterus_albus
ENSMZEG00005019482	riok1	99	64.947	MGP_CAROLIEiJ_G0018439	Riok1	99	65.125	Mus_caroli
ENSMZEG00005019482	riok1	99	65.187	ENSMUSG00000021428	Riok1	99	64.947	Mus_musculus
ENSMZEG00005019482	riok1	99	64.947	MGP_PahariEiJ_G0019507	Riok1	99	62.872	Mus_pahari
ENSMZEG00005019482	riok1	99	64.769	MGP_SPRETEiJ_G0019319	Riok1	99	63.398	Mus_spretus
ENSMZEG00005019482	riok1	99	66.548	ENSMPUG00000000570	RIOK1	99	66.018	Mustela_putorius_furo
ENSMZEG00005019482	riok1	99	67.080	ENSMLUG00000015312	RIOK1	99	66.726	Myotis_lucifugus
ENSMZEG00005019482	riok1	99	66.906	ENSNGAG00000021734	Riok1	99	67.558	Nannospalax_galili
ENSMZEG00005019482	riok1	94	87.647	ENSNBRG00000017489	riok1	90	87.647	Neolamprologus_brichardi
ENSMZEG00005019482	riok1	99	59.818	ENSNLEG00000011621	RIOK1	98	60.182	Nomascus_leucogenys
ENSMZEG00005019482	riok1	74	57.282	ENSMEUG00000006679	-	72	57.329	Notamacropus_eugenii
ENSMZEG00005019482	riok1	68	68.733	ENSOPRG00000009524	RIOK1	100	68.733	Ochotona_princeps
ENSMZEG00005019482	riok1	71	58.929	ENSODEG00000005663	RIOK1	98	59.747	Octodon_degus
ENSMZEG00005019482	riok1	100	89.088	ENSONIG00000014010	riok1	99	89.803	Oreochromis_niloticus
ENSMZEG00005019482	riok1	83	75.162	ENSOANG00000012553	RIOK1	99	75.810	Ornithorhynchus_anatinus
ENSMZEG00005019482	riok1	99	66.370	ENSOCUG00000011824	RIOK1	98	64.851	Oryctolagus_cuniculus
ENSMZEG00005019482	riok1	100	78.755	ENSORLG00000008221	riok1	100	78.832	Oryzias_latipes
ENSMZEG00005019482	riok1	99	77.348	ENSORLG00020013838	riok1	70	77.289	Oryzias_latipes_hni
ENSMZEG00005019482	riok1	100	79.525	ENSORLG00015009817	riok1	99	79.380	Oryzias_latipes_hsok
ENSMZEG00005019482	riok1	100	80.699	ENSOMEG00000002758	riok1	89	79.927	Oryzias_melastigma
ENSMZEG00005019482	riok1	99	61.580	ENSOGAG00000010192	RIOK1	99	61.939	Otolemur_garnettii
ENSMZEG00005019482	riok1	99	66.785	ENSOARG00000017747	RIOK1	99	65.542	Ovis_aries
ENSMZEG00005019482	riok1	99	58.730	ENSPPAG00000016349	RIOK1	100	68.339	Pan_paniscus
ENSMZEG00005019482	riok1	99	66.963	ENSPPRG00000001932	RIOK1	99	66.784	Panthera_pardus
ENSMZEG00005019482	riok1	99	67.318	ENSPTIG00000018545	RIOK1	99	66.784	Panthera_tigris_altaica
ENSMZEG00005019482	riok1	99	66.667	ENSPTRG00000017700	RIOK1	99	66.489	Pan_troglodytes
ENSMZEG00005019482	riok1	99	67.084	ENSPANG00000016522	RIOK1	99	66.370	Papio_anubis
ENSMZEG00005019482	riok1	99	71.841	ENSPKIG00000006442	riok1	99	73.285	Paramormyrops_kingsleyae
ENSMZEG00005019482	riok1	99	69.892	ENSPSIG00000006488	RIOK1	97	68.336	Pelodiscus_sinensis
ENSMZEG00005019482	riok1	77	74.940	ENSPMGG00000017807	riok1	96	73.259	Periophthalmus_magnuspinnatus
ENSMZEG00005019482	riok1	99	65.480	ENSPEMG00000017844	Riok1	99	65.658	Peromyscus_maniculatus_bairdii
ENSMZEG00005019482	riok1	73	64.988	ENSPMAG00000006351	riok1	98	66.667	Petromyzon_marinus
ENSMZEG00005019482	riok1	79	71.918	ENSPCIG00000012653	RIOK1	86	68.033	Phascolarctos_cinereus
ENSMZEG00005019482	riok1	100	74.492	ENSPFOG00000011532	riok1	100	74.677	Poecilia_formosa
ENSMZEG00005019482	riok1	100	74.122	ENSPLAG00000001341	riok1	100	74.307	Poecilia_latipinna
ENSMZEG00005019482	riok1	100	75.046	ENSPMEG00000007710	riok1	100	75.231	Poecilia_mexicana
ENSMZEG00005019482	riok1	100	75.416	ENSPREG00000009237	riok1	100	73.985	Poecilia_reticulata
ENSMZEG00005019482	riok1	85	73.166	ENSPPYG00000016207	RIOK1	99	66.372	Pongo_abelii
ENSMZEG00005019482	riok1	99	57.117	ENSPCAG00000007892	RIOK1	99	57.374	Procavia_capensis
ENSMZEG00005019482	riok1	99	66.075	ENSPVAG00000014091	RIOK1	99	66.667	Pteropus_vampyrus
ENSMZEG00005019482	riok1	58	99.681	ENSPNYG00000004465	riok1	100	99.681	Pundamilia_nyererei
ENSMZEG00005019482	riok1	99	71.993	ENSPNAG00000015435	riok1	98	71.993	Pygocentrus_nattereri
ENSMZEG00005019482	riok1	99	65.295	ENSRNOG00000014049	Riok1	99	72.786	Rattus_norvegicus
ENSMZEG00005019482	riok1	99	66.547	ENSRBIG00000036685	RIOK1	99	65.897	Rhinopithecus_bieti
ENSMZEG00005019482	riok1	99	66.726	ENSRROG00000036611	RIOK1	99	66.075	Rhinopithecus_roxellana
ENSMZEG00005019482	riok1	62	39.779	YOR119C	RIO1	96	36.570	Saccharomyces_cerevisiae
ENSMZEG00005019482	riok1	99	66.312	ENSSBOG00000012588	RIOK1	99	66.489	Saimiri_boliviensis_boliviensis
ENSMZEG00005019482	riok1	72	77.863	ENSSHAG00000003091	RIOK1	92	67.556	Sarcophilus_harrisii
ENSMZEG00005019482	riok1	89	79.226	ENSSFOG00015001035	riok1	100	72.872	Scleropages_formosus
ENSMZEG00005019482	riok1	58	82.803	ENSSDUG00000007291	riok1	100	82.166	Seriola_dumerili
ENSMZEG00005019482	riok1	100	82.664	ENSSLDG00000017657	riok1	100	82.482	Seriola_lalandi_dorsalis
ENSMZEG00005019482	riok1	89	62.112	ENSSPUG00000007624	RIOK1	85	62.168	Sphenodon_punctatus
ENSMZEG00005019482	riok1	99	84.387	ENSSPAG00000022710	riok1	99	84.387	Stegastes_partitus
ENSMZEG00005019482	riok1	99	65.597	ENSSSCG00000001024	RIOK1	99	64.643	Sus_scrofa
ENSMZEG00005019482	riok1	100	67.838	ENSTGUG00000002331	RIOK1	99	68.198	Taeniopygia_guttata
ENSMZEG00005019482	riok1	52	73.239	ENSTRUG00000001575	-	100	73.239	Takifugu_rubripes
ENSMZEG00005019482	riok1	81	67.500	ENSTRUG00000002854	riok1	93	69.816	Takifugu_rubripes
ENSMZEG00005019482	riok1	100	67.438	ENSTNIG00000003078	riok1	99	66.667	Tetraodon_nigroviridis
ENSMZEG00005019482	riok1	99	64.121	ENSTBEG00000016730	RIOK1	99	63.523	Tupaia_belangeri
ENSMZEG00005019482	riok1	72	78.351	ENSTTRG00000017335	RIOK1	81	78.351	Tursiops_truncatus
ENSMZEG00005019482	riok1	93	66.409	ENSUAMG00000003721	RIOK1	86	69.358	Ursus_americanus
ENSMZEG00005019482	riok1	99	66.607	ENSUMAG00000018461	RIOK1	99	66.607	Ursus_maritimus
ENSMZEG00005019482	riok1	58	79.464	ENSVPAG00000010813	-	52	83.333	Vicugna_pacos
ENSMZEG00005019482	riok1	85	74.423	ENSVVUG00000005018	RIOK1	99	66.903	Vulpes_vulpes
ENSMZEG00005019482	riok1	79	75.688	ENSXETG00000020436	riok1	79	75.688	Xenopus_tropicalis
ENSMZEG00005019482	riok1	85	75.488	ENSXCOG00000000245	riok1	100	75.705	Xiphophorus_couchianus
ENSMZEG00005019482	riok1	87	74.841	ENSXMAG00000014572	riok1	91	74.790	Xiphophorus_maculatus