EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005019625 (Gene tree)
Gene ID: 101477569
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 14630 bases
Position: chrLG7:9369847-9384476
Accession: 101477569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005026311	RRM_1	PF00076.22	1.8e-40	1	2
ENSMZEP00005026311	RRM_1	PF00076.22	1.8e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005027160	-	4707	XM_004553411	ENSMZEP00005026311	707 (aa)	XP_004553468	-

Gene Model

Click here to download ENSMZEG00005019625's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005019625's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005019625	rbm28	69	53.213	ENSG00000106344	RBM28	73	53.263	Homo_sapiens
ENSMZEG00005019625	rbm28	62	76.072	ENSAPOG00000015512	rbm28	93	70.661	Acanthochromis_polyacanthus
ENSMZEG00005019625	rbm28	92	52.959	ENSAMEG00000004776	RBM28	79	51.187	Ailuropoda_melanoleuca
ENSMZEG00005019625	rbm28	61	84.848	ENSACIG00000023153	rbm28	98	79.536	Amphilophus_citrinellus
ENSMZEG00005019625	rbm28	62	76.524	ENSAOCG00000000462	rbm28	93	72.006	Amphiprion_ocellaris
ENSMZEG00005019625	rbm28	62	76.298	ENSAPEG00000012996	rbm28	93	72.486	Amphiprion_percula
ENSMZEG00005019625	rbm28	100	49.793	ENSANAG00000033922	RBM28	93	49.662	Aotus_nancymaae
ENSMZEG00005019625	rbm28	100	99.717	ENSACLG00000025024	rbm28	93	99.717	Astatotilapia_calliptera
ENSMZEG00005019625	rbm28	63	60.714	ENSAMXG00000000763	rbm28	99	58.425	Astyanax_mexicanus
ENSMZEG00005019625	rbm28	63	56.152	ENSBTAG00000017001	RBM28	93	49.120	Bos_taurus
ENSMZEG00005019625	rbm28	100	49.521	ENSCJAG00000017731	RBM28	93	49.799	Callithrix_jacchus
ENSMZEG00005019625	rbm28	100	50.978	ENSCAFG00000001667	RBM28	93	49.313	Canis_familiaris
ENSMZEG00005019625	rbm28	100	50.978	ENSCAFG00020021648	RBM28	93	49.313	Canis_lupus_dingo
ENSMZEG00005019625	rbm28	100	49.864	ENSCHIG00000014146	RBM28	93	50.676	Capra_hircus
ENSMZEG00005019625	rbm28	65	54.487	ENSTSYG00000002892	RBM28	93	50.138	Carlito_syrichta
ENSMZEG00005019625	rbm28	85	39.839	ENSCAPG00000013218	RBM28	89	39.897	Cavia_aperea
ENSMZEG00005019625	rbm28	68	54.601	ENSCPOG00000006253	RBM28	93	49.059	Cavia_porcellus
ENSMZEG00005019625	rbm28	68	52.977	ENSCCAG00000035105	RBM28	93	49.394	Cebus_capucinus
ENSMZEG00005019625	rbm28	70	53.908	ENSCATG00000040497	RBM28	93	48.365	Cercocebus_atys
ENSMZEG00005019625	rbm28	67	54.582	ENSCLAG00000003707	RBM28	93	47.035	Chinchilla_lanigera
ENSMZEG00005019625	rbm28	70	52.906	ENSCSAG00000010161	RBM28	60	52.542	Chlorocebus_sabaeus
ENSMZEG00005019625	rbm28	55	50.922	ENSCPBG00000018088	RBM28	81	50.461	Chrysemys_picta_bellii
ENSMZEG00005019625	rbm28	92	38.700	ENSCING00000009238	-	56	43.860	Ciona_intestinalis
ENSMZEG00005019625	rbm28	54	59.109	ENSCANG00000038397	RBM28	87	50.951	Colobus_angolensis_palliatus
ENSMZEG00005019625	rbm28	70	53.924	ENSCGRG00001021278	Rbm28	93	49.595	Cricetulus_griseus_chok1gshd
ENSMZEG00005019625	rbm28	100	49.794	ENSCGRG00000005098	Rbm28	93	48.925	Cricetulus_griseus_crigri
ENSMZEG00005019625	rbm28	100	63.854	ENSCSEG00000004212	rbm28	93	63.483	Cynoglossus_semilaevis
ENSMZEG00005019625	rbm28	64	76.821	ENSCVAG00000010493	rbm28	93	65.369	Cyprinodon_variegatus
ENSMZEG00005019625	rbm28	88	60.225	ENSDARG00000025332	rbm28	92	53.523	Danio_rerio
ENSMZEG00005019625	rbm28	100	49.793	ENSDNOG00000001124	RBM28	93	48.988	Dasypus_novemcinctus
ENSMZEG00005019625	rbm28	71	51.859	ENSDORG00000004184	Rbm28	94	51.619	Dipodomys_ordii
ENSMZEG00005019625	rbm28	68	39.834	FBgn0260456	CG4806	67	38.289	Drosophila_melanogaster
ENSMZEG00005019625	rbm28	61	51.945	ENSETEG00000007130	RBM28	56	51.259	Echinops_telfairi
ENSMZEG00005019625	rbm28	100	38.082	ENSEBUG00000004419	rbm28	91	40.197	Eptatretus_burgeri
ENSMZEG00005019625	rbm28	70	53.479	ENSEASG00005008528	RBM28	93	48.700	Equus_asinus_asinus
ENSMZEG00005019625	rbm28	70	53.280	ENSECAG00000007745	RBM28	93	48.564	Equus_caballus
ENSMZEG00005019625	rbm28	100	47.397	ENSEEUG00000002389	RBM28	93	46.515	Erinaceus_europaeus
ENSMZEG00005019625	rbm28	100	58.038	ENSELUG00000020602	rbm28	93	56.815	Esox_lucius
ENSMZEG00005019625	rbm28	100	49.932	ENSFCAG00000000946	RBM28	93	50.069	Felis_catus
ENSMZEG00005019625	rbm28	100	50.617	ENSFDAG00000010169	RBM28	93	49.319	Fukomys_damarensis
ENSMZEG00005019625	rbm28	87	61.333	ENSGMOG00000007091	rbm28	93	52.990	Gadus_morhua
ENSMZEG00005019625	rbm28	64	73.407	ENSGAFG00000004802	rbm28	98	72.967	Gambusia_affinis
ENSMZEG00005019625	rbm28	63	75.281	ENSGACG00000012612	rbm28	100	67.875	Gasterosteus_aculeatus
ENSMZEG00005019625	rbm28	74	63.102	ENSGAGG00000008873	RBM28	74	62.105	Gopherus_agassizii
ENSMZEG00005019625	rbm28	69	52.811	ENSGGOG00000004644	RBM28	96	48.370	Gorilla_gorilla
ENSMZEG00005019625	rbm28	94	98.653	ENSHBUG00000009611	rbm28	92	98.653	Haplochromis_burtoni
ENSMZEG00005019625	rbm28	100	51.087	ENSHGLG00000005409	RBM28	93	49.523	Heterocephalus_glaber_female
ENSMZEG00005019625	rbm28	100	51.087	ENSHGLG00100016458	RBM28	93	49.523	Heterocephalus_glaber_male
ENSMZEG00005019625	rbm28	82	55.188	ENSHCOG00000010597	rbm28	82	53.061	Hippocampus_comes
ENSMZEG00005019625	rbm28	61	48.157	ENSIPUG00000007103	rbm28	92	45.702	Ictalurus_punctatus
ENSMZEG00005019625	rbm28	71	53.831	ENSSTOG00000002169	RBM28	93	48.617	Ictidomys_tridecemlineatus
ENSMZEG00005019625	rbm28	61	54.756	ENSJJAG00000022400	Rbm28	59	54.378	Jaculus_jaculus
ENSMZEG00005019625	rbm28	64	72.727	ENSKMAG00000013348	rbm28	93	65.556	Kryptolebias_marmoratus
ENSMZEG00005019625	rbm28	64	72.907	ENSLBEG00000012998	rbm28	93	65.075	Labrus_bergylta
ENSMZEG00005019625	rbm28	72	46.239	ENSLACG00000010485	-	92	47.826	Latimeria_chalumnae
ENSMZEG00005019625	rbm28	100	57.343	ENSLOCG00000015541	rbm28	72	61.734	Lepisosteus_oculatus
ENSMZEG00005019625	rbm28	100	50.340	ENSLAFG00000010717	RBM28	93	48.898	Loxodonta_africana
ENSMZEG00005019625	rbm28	70	53.414	ENSMFAG00000031036	RBM28	93	48.431	Macaca_fascicularis
ENSMZEG00005019625	rbm28	70	53.414	ENSMMUG00000007250	RBM28	93	48.638	Macaca_mulatta
ENSMZEG00005019625	rbm28	100	50.698	ENSMNEG00000036970	RBM28	93	49.861	Macaca_nemestrina
ENSMZEG00005019625	rbm28	100	68.163	ENSMAMG00000008525	rbm28	93	67.818	Mastacembelus_armatus
ENSMZEG00005019625	rbm28	70	54.545	ENSMAUG00000002263	Rbm28	93	50.000	Mesocricetus_auratus
ENSMZEG00005019625	rbm28	71	51.052	ENSMICG00000000107	RBM28	100	48.448	Microcebus_murinus
ENSMZEG00005019625	rbm28	100	50.000	ENSMOCG00000014615	Rbm28	93	50.480	Microtus_ochrogaster
ENSMZEG00005019625	rbm28	64	65.188	ENSMMOG00000008600	rbm28	98	61.875	Mola_mola
ENSMZEG00005019625	rbm28	100	48.093	ENSMODG00000015151	RBM28	59	53.066	Monodelphis_domestica
ENSMZEG00005019625	rbm28	64	75.991	ENSMALG00000006419	rbm28	93	67.355	Monopterus_albus
ENSMZEG00005019625	rbm28	68	53.878	MGP_CAROLIEiJ_G0028162	Rbm28	93	49.189	Mus_caroli
ENSMZEG00005019625	rbm28	100	50.275	ENSMUSG00000029701	Rbm28	93	49.592	Mus_musculus
ENSMZEG00005019625	rbm28	100	49.588	MGP_PahariEiJ_G0021920	Rbm28	93	48.916	Mus_pahari
ENSMZEG00005019625	rbm28	100	50.000	MGP_SPRETEiJ_G0029162	Rbm28	93	49.592	Mus_spretus
ENSMZEG00005019625	rbm28	100	52.216	ENSMPUG00000006511	RBM28	93	49.864	Mustela_putorius_furo
ENSMZEG00005019625	rbm28	69	52.727	ENSMLUG00000002186	RBM28	93	48.560	Myotis_lucifugus
ENSMZEG00005019625	rbm28	100	50.274	ENSNGAG00000006480	-	93	49.030	Nannospalax_galili
ENSMZEG00005019625	rbm28	100	49.931	ENSNGAG00000017946	-	93	47.131	Nannospalax_galili
ENSMZEG00005019625	rbm28	70	52.372	ENSNLEG00000012307	RBM28	93	49.113	Nomascus_leucogenys
ENSMZEG00005019625	rbm28	86	60.403	ENSMEUG00000009611	RBM28	86	60.403	Notamacropus_eugenii
ENSMZEG00005019625	rbm28	100	47.772	ENSODEG00000003213	-	93	46.496	Octodon_degus
ENSMZEG00005019625	rbm28	89	44.615	ENSODEG00000013217	-	71	57.219	Octodon_degus
ENSMZEG00005019625	rbm28	100	94.861	ENSONIG00000014924	rbm28	93	94.861	Oreochromis_niloticus
ENSMZEG00005019625	rbm28	100	47.483	ENSOANG00000000815	-	63	49.489	Ornithorhynchus_anatinus
ENSMZEG00005019625	rbm28	69	54.435	ENSOCUG00000003009	RBM28	93	48.853	Oryctolagus_cuniculus
ENSMZEG00005019625	rbm28	99	66.248	ENSORLG00000009636	rbm28	93	64.722	Oryzias_latipes
ENSMZEG00005019625	rbm28	64	74.393	ENSORLG00020002123	rbm28	99	62.450	Oryzias_latipes_hni
ENSMZEG00005019625	rbm28	85	71.366	ENSORLG00015015030	rbm28	90	68.421	Oryzias_latipes_hsok
ENSMZEG00005019625	rbm28	64	76.044	ENSOMEG00000007801	rbm28	93	68.961	Oryzias_melastigma
ENSMZEG00005019625	rbm28	70	53.707	ENSOGAG00000006011	RBM28	72	53.518	Otolemur_garnettii
ENSMZEG00005019625	rbm28	100	51.081	ENSOARG00000002547	RBM28	93	49.258	Ovis_aries
ENSMZEG00005019625	rbm28	69	53.012	ENSPPAG00000041730	RBM28	93	48.774	Pan_paniscus
ENSMZEG00005019625	rbm28	100	49.932	ENSPPRG00000004420	RBM28	93	49.520	Panthera_pardus
ENSMZEG00005019625	rbm28	100	50.068	ENSPTIG00000008550	RBM28	93	49.657	Panthera_tigris_altaica
ENSMZEG00005019625	rbm28	69	53.213	ENSPTRG00000019659	RBM28	93	48.774	Pan_troglodytes
ENSMZEG00005019625	rbm28	70	52.716	ENSPANG00000022295	RBM28	93	48.501	Papio_anubis
ENSMZEG00005019625	rbm28	99	54.040	ENSPKIG00000023453	rbm28	93	52.701	Paramormyrops_kingsleyae
ENSMZEG00005019625	rbm28	100	57.143	ENSPMGG00000012840	rbm28	91	57.426	Periophthalmus_magnuspinnatus
ENSMZEG00005019625	rbm28	100	50.280	ENSPEMG00000020673	Rbm28	93	49.093	Peromyscus_maniculatus_bairdii
ENSMZEG00005019625	rbm28	52	42.298	ENSPMAG00000002948	-	99	42.246	Petromyzon_marinus
ENSMZEG00005019625	rbm28	100	48.271	ENSPCIG00000012810	RBM28	93	48.214	Phascolarctos_cinereus
ENSMZEG00005019625	rbm28	64	73.289	ENSPFOG00000018209	rbm28	93	62.917	Poecilia_formosa
ENSMZEG00005019625	rbm28	63	72.707	ENSPLAG00000016078	rbm28	89	62.745	Poecilia_latipinna
ENSMZEG00005019625	rbm28	64	72.848	ENSPMEG00000004292	rbm28	93	62.639	Poecilia_mexicana
ENSMZEG00005019625	rbm28	63	71.523	ENSPREG00000014287	rbm28	93	62.031	Poecilia_reticulata
ENSMZEG00005019625	rbm28	69	53.213	ENSPPYG00000017975	RBM28	93	49.386	Pongo_abelii
ENSMZEG00005019625	rbm28	72	50.964	ENSPCAG00000008223	RBM28	75	50.543	Procavia_capensis
ENSMZEG00005019625	rbm28	71	52.124	ENSPCOG00000016797	RBM28	93	48.427	Propithecus_coquereli
ENSMZEG00005019625	rbm28	70	62.736	ENSPVAG00000005443	RBM28	64	62.736	Pteropus_vampyrus
ENSMZEG00005019625	rbm28	100	98.868	ENSPNYG00000014003	rbm28	93	98.868	Pundamilia_nyererei
ENSMZEG00005019625	rbm28	100	49.113	ENSRNOG00000005468	Rbm28	93	48.444	Rattus_norvegicus
ENSMZEG00005019625	rbm28	70	53.307	ENSRBIG00000033990	RBM28	93	47.749	Rhinopithecus_bieti
ENSMZEG00005019625	rbm28	70	53.414	ENSRROG00000040747	RBM28	93	48.501	Rhinopithecus_roxellana
ENSMZEG00005019625	rbm28	84	44.817	ENSSBOG00000012308	RBM28	92	44.663	Saimiri_boliviensis_boliviensis
ENSMZEG00005019625	rbm28	99	47.411	ENSSHAG00000017017	RBM28	94	47.612	Sarcophilus_harrisii
ENSMZEG00005019625	rbm28	63	61.247	ENSSFOG00015001231	rbm28	92	54.202	Scleropages_formosus
ENSMZEG00005019625	rbm28	64	67.763	ENSSMAG00000003885	rbm28	93	65.458	Scophthalmus_maximus
ENSMZEG00005019625	rbm28	64	79.515	ENSSDUG00000014270	rbm28	92	77.542	Seriola_dumerili
ENSMZEG00005019625	rbm28	100	69.433	ENSSLDG00000020099	rbm28	93	69.848	Seriola_lalandi_dorsalis
ENSMZEG00005019625	rbm28	70	59.677	ENSSARG00000008303	RBM28	69	59.730	Sorex_araneus
ENSMZEG00005019625	rbm28	72	60.294	ENSSPUG00000000838	RBM28	80	60.294	Sphenodon_punctatus
ENSMZEG00005019625	rbm28	63	76.682	ENSSPAG00000023305	rbm28	100	70.411	Stegastes_partitus
ENSMZEG00005019625	rbm28	100	51.081	ENSSSCG00000031847	RBM28	93	49.659	Sus_scrofa
ENSMZEG00005019625	rbm28	100	61.149	ENSTRUG00000013311	rbm28	93	61.740	Takifugu_rubripes
ENSMZEG00005019625	rbm28	99	60.631	ENSTNIG00000017962	rbm28	62	67.230	Tetraodon_nigroviridis
ENSMZEG00005019625	rbm28	80	54.574	ENSTBEG00000012749	RBM28	65	54.313	Tupaia_belangeri
ENSMZEG00005019625	rbm28	100	49.535	ENSTTRG00000013647	RBM28	93	48.143	Tursiops_truncatus
ENSMZEG00005019625	rbm28	100	47.075	ENSUAMG00000006949	RBM28	93	46.568	Ursus_americanus
ENSMZEG00005019625	rbm28	100	50.488	ENSUMAG00000005997	RBM28	93	49.044	Ursus_maritimus
ENSMZEG00005019625	rbm28	92	48.545	ENSVPAG00000008304	RBM28	85	47.189	Vicugna_pacos
ENSMZEG00005019625	rbm28	100	50.491	ENSVVUG00000007270	RBM28	93	49.379	Vulpes_vulpes
ENSMZEG00005019625	rbm28	99	45.340	ENSXETG00000009271	rbm28	93	47.319	Xenopus_tropicalis
ENSMZEG00005019625	rbm28	64	68.653	ENSXCOG00000020357	rbm28	98	66.250	Xiphophorus_couchianus
ENSMZEG00005019625	rbm28	99	64.356	ENSXMAG00000004415	rbm28	93	63.842	Xiphophorus_maculatus