EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005020645 (Gene tree)
Gene ID: 101483216
Gene Symbol: prdm5
Alias: un-named hi61|unm hi61
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 41321 bases
Position: chrLG23:8588889-8630209
Accession: 101483216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	1	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	2	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	3	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	4	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	5	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	6	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	7	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	8	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	9	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	10	11
ENSMZEP00005027688	zf-C2H2	PF00096.26	9.9e-63	11	11
ENSMZEP00005027688	zf-met	PF12874.7	5.5e-23	1	3
ENSMZEP00005027688	zf-met	PF12874.7	5.5e-23	2	3
ENSMZEP00005027688	zf-met	PF12874.7	5.5e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005028567	-	1755	XM_004557085	ENSMZEP00005027688	584 (aa)	XP_004557142	-

Gene Model

Click here to download ENSMZEG00005020645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005020645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005020645	prdm5	100	81.833	ENSG00000138738	PRDM5	100	81.333	Homo_sapiens
ENSMZEG00005020645	prdm5	100	97.119	ENSAPOG00000023220	prdm5	100	97.119	Acanthochromis_polyacanthus
ENSMZEG00005020645	prdm5	90	72.600	ENSAMEG00000003050	PRDM5	100	72.251	Ailuropoda_melanoleuca
ENSMZEG00005020645	prdm5	100	96.265	ENSACIG00000000406	prdm5	100	96.265	Amphilophus_citrinellus
ENSMZEG00005020645	prdm5	100	97.800	ENSAOCG00000014806	prdm5	100	97.800	Amphiprion_ocellaris
ENSMZEG00005020645	prdm5	100	87.255	ENSAPEG00000016846	prdm5	100	88.725	Amphiprion_percula
ENSMZEG00005020645	prdm5	100	98.132	ENSATEG00000013829	prdm5	100	98.132	Anabas_testudineus
ENSMZEG00005020645	prdm5	95	81.758	ENSAPLG00000013828	PRDM5	100	81.924	Anas_platyrhynchos
ENSMZEG00005020645	prdm5	100	77.496	ENSACAG00000012999	PRDM5	100	77.338	Anolis_carolinensis
ENSMZEG00005020645	prdm5	100	89.333	ENSANAG00000027411	PRDM5	100	89.333	Aotus_nancymaae
ENSMZEG00005020645	prdm5	100	99.151	ENSACLG00000017996	prdm5	100	99.151	Astatotilapia_calliptera
ENSMZEG00005020645	prdm5	84	85.985	ENSAMXG00000041864	prdm5	99	86.364	Astyanax_mexicanus
ENSMZEG00005020645	prdm5	100	76.862	ENSBTAG00000012111	PRDM5	100	76.545	Bos_taurus
ENSMZEG00005020645	prdm5	100	88.667	ENSCJAG00000003133	PRDM5	100	88.667	Callithrix_jacchus
ENSMZEG00005020645	prdm5	91	73.086	ENSCAFG00000004179	PRDM5	96	72.390	Canis_familiaris
ENSMZEG00005020645	prdm5	100	81.167	ENSCAFG00020017685	PRDM5	100	80.667	Canis_lupus_dingo
ENSMZEG00005020645	prdm5	100	80.833	ENSCHIG00000018772	PRDM5	100	80.500	Capra_hircus
ENSMZEG00005020645	prdm5	95	81.165	ENSTSYG00000009630	PRDM5	94	80.000	Carlito_syrichta
ENSMZEG00005020645	prdm5	90	88.667	ENSCAPG00000015217	PRDM5	100	88.667	Cavia_aperea
ENSMZEG00005020645	prdm5	95	87.975	ENSCPOG00000012883	PRDM5	100	88.667	Cavia_porcellus
ENSMZEG00005020645	prdm5	100	89.333	ENSCCAG00000023157	PRDM5	100	89.333	Cebus_capucinus
ENSMZEG00005020645	prdm5	100	89.333	ENSCATG00000042510	PRDM5	100	89.333	Cercocebus_atys
ENSMZEG00005020645	prdm5	95	87.658	ENSCLAG00000005392	PRDM5	100	88.667	Chinchilla_lanigera
ENSMZEG00005020645	prdm5	100	81.667	ENSCSAG00000003729	PRDM5	100	81.167	Chlorocebus_sabaeus
ENSMZEG00005020645	prdm5	99	78.322	ENSCHOG00000007801	PRDM5	91	78.322	Choloepus_hoffmanni
ENSMZEG00005020645	prdm5	100	81.094	ENSCPBG00000024735	PRDM5	100	81.406	Chrysemys_picta_bellii
ENSMZEG00005020645	prdm5	100	89.333	ENSCANG00000036807	PRDM5	100	89.333	Colobus_angolensis_palliatus
ENSMZEG00005020645	prdm5	100	88.667	ENSCGRG00001010581	Prdm5	100	88.667	Cricetulus_griseus_chok1gshd
ENSMZEG00005020645	prdm5	95	73.158	ENSCGRG00000010996	-	99	73.158	Cricetulus_griseus_crigri
ENSMZEG00005020645	prdm5	100	95.110	ENSCSEG00000019979	prdm5	100	95.110	Cynoglossus_semilaevis
ENSMZEG00005020645	prdm5	100	89.032	ENSCVAG00000013692	prdm5	100	89.032	Cyprinodon_variegatus
ENSMZEG00005020645	prdm5	100	84.652	ENSDARG00000006288	prdm5	100	83.861	Danio_rerio
ENSMZEG00005020645	prdm5	90	75.868	ENSDNOG00000002009	PRDM5	100	75.521	Dasypus_novemcinctus
ENSMZEG00005020645	prdm5	100	87.342	ENSDORG00000007739	Prdm5	76	87.342	Dipodomys_ordii
ENSMZEG00005020645	prdm5	92	80.952	ENSETEG00000020268	PRDM5	84	82.796	Echinops_telfairi
ENSMZEG00005020645	prdm5	99	75.338	ENSEBUG00000004301	prdm5	100	75.507	Eptatretus_burgeri
ENSMZEG00005020645	prdm5	100	90.000	ENSEASG00005018365	PRDM5	100	90.000	Equus_asinus_asinus
ENSMZEG00005020645	prdm5	100	66.049	ENSECAG00000024747	-	100	76.636	Equus_caballus
ENSMZEG00005020645	prdm5	99	79.767	ENSECAG00000011516	PRDM5	89	79.377	Equus_caballus
ENSMZEG00005020645	prdm5	99	74.870	ENSEEUG00000010306	PRDM5	100	74.350	Erinaceus_europaeus
ENSMZEG00005020645	prdm5	99	85.582	ENSELUG00000005894	prdm5	93	87.061	Esox_lucius
ENSMZEG00005020645	prdm5	100	81.167	ENSFCAG00000025656	PRDM5	100	80.833	Felis_catus
ENSMZEG00005020645	prdm5	95	69.565	ENSFALG00000008381	PRDM5	100	68.634	Ficedula_albicollis
ENSMZEG00005020645	prdm5	100	88.667	ENSFDAG00000021361	PRDM5	100	88.667	Fukomys_damarensis
ENSMZEG00005020645	prdm5	100	98.299	ENSFHEG00000013040	prdm5	100	98.299	Fundulus_heteroclitus
ENSMZEG00005020645	prdm5	100	76.316	ENSGMOG00000012038	prdm5	100	76.316	Gadus_morhua
ENSMZEG00005020645	prdm5	100	81.546	ENSGALG00000011963	PRDM5	100	82.650	Gallus_gallus
ENSMZEG00005020645	prdm5	100	92.373	ENSGAFG00000019233	prdm5	100	92.712	Gambusia_affinis
ENSMZEG00005020645	prdm5	99	77.247	ENSGAGG00000020362	PRDM5	99	77.820	Gopherus_agassizii
ENSMZEG00005020645	prdm5	100	89.333	ENSGGOG00000013562	PRDM5	100	89.333	Gorilla_gorilla
ENSMZEG00005020645	prdm5	100	100.000	ENSHBUG00000023375	prdm5	100	100.000	Haplochromis_burtoni
ENSMZEG00005020645	prdm5	100	75.610	ENSHGLG00000003010	PRDM5	100	79.747	Heterocephalus_glaber_female
ENSMZEG00005020645	prdm5	100	88.667	ENSHGLG00100003696	PRDM5	100	88.667	Heterocephalus_glaber_male
ENSMZEG00005020645	prdm5	100	91.479	ENSHCOG00000012131	prdm5	100	91.479	Hippocampus_comes
ENSMZEG00005020645	prdm5	100	90.436	ENSIPUG00000001248	prdm5	100	90.436	Ictalurus_punctatus
ENSMZEG00005020645	prdm5	95	85.443	ENSSTOG00000004741	PRDM5	100	87.333	Ictidomys_tridecemlineatus
ENSMZEG00005020645	prdm5	95	87.658	ENSJJAG00000011464	Prdm5	100	88.000	Jaculus_jaculus
ENSMZEG00005020645	prdm5	100	97.462	ENSKMAG00000013663	prdm5	100	97.462	Kryptolebias_marmoratus
ENSMZEG00005020645	prdm5	100	92.432	ENSLBEG00000022736	prdm5	100	92.432	Labrus_bergylta
ENSMZEG00005020645	prdm5	91	80.829	ENSLACG00000009187	PRDM5	99	82.609	Latimeria_chalumnae
ENSMZEG00005020645	prdm5	100	87.220	ENSLOCG00000009778	prdm5	99	87.220	Lepisosteus_oculatus
ENSMZEG00005020645	prdm5	100	81.167	ENSLAFG00000006532	PRDM5	99	82.911	Loxodonta_africana
ENSMZEG00005020645	prdm5	100	89.333	ENSMFAG00000045845	PRDM5	100	89.333	Macaca_fascicularis
ENSMZEG00005020645	prdm5	100	89.333	ENSMMUG00000003249	PRDM5	100	89.333	Macaca_mulatta
ENSMZEG00005020645	prdm5	100	89.333	ENSMNEG00000019018	PRDM5	100	89.333	Macaca_nemestrina
ENSMZEG00005020645	prdm5	95	81.195	ENSMLEG00000023145	PRDM5	100	80.668	Mandrillus_leucophaeus
ENSMZEG00005020645	prdm5	100	94.918	ENSMAMG00000013419	prdm5	100	94.918	Mastacembelus_armatus
ENSMZEG00005020645	prdm5	95	81.095	ENSMGAG00000010710	PRDM5	100	82.255	Meleagris_gallopavo
ENSMZEG00005020645	prdm5	100	88.667	ENSMAUG00000006768	Prdm5	100	88.667	Mesocricetus_auratus
ENSMZEG00005020645	prdm5	100	88.667	ENSMICG00000001459	PRDM5	100	88.667	Microcebus_murinus
ENSMZEG00005020645	prdm5	100	88.667	ENSMOCG00000016267	Prdm5	100	88.667	Microtus_ochrogaster
ENSMZEG00005020645	prdm5	100	96.954	ENSMMOG00000006035	prdm5	100	96.954	Mola_mola
ENSMZEG00005020645	prdm5	100	78.041	ENSMODG00000018942	PRDM5	100	78.831	Monodelphis_domestica
ENSMZEG00005020645	prdm5	100	94.188	ENSMALG00000013934	prdm5	100	94.188	Monopterus_albus
ENSMZEG00005020645	prdm5	100	88.000	MGP_CAROLIEiJ_G0028463	Prdm5	100	88.000	Mus_caroli
ENSMZEG00005020645	prdm5	100	88.000	ENSMUSG00000029913	Prdm5	100	88.000	Mus_musculus
ENSMZEG00005020645	prdm5	100	88.000	MGP_PahariEiJ_G0022203	Prdm5	100	88.000	Mus_pahari
ENSMZEG00005020645	prdm5	100	88.000	MGP_SPRETEiJ_G0029467	Prdm5	100	88.000	Mus_spretus
ENSMZEG00005020645	prdm5	100	76.387	ENSMPUG00000017415	PRDM5	100	76.545	Mustela_putorius_furo
ENSMZEG00005020645	prdm5	90	69.603	ENSMLUG00000006097	PRDM5	100	69.430	Myotis_lucifugus
ENSMZEG00005020645	prdm5	100	88.000	ENSNGAG00000018317	Prdm5	100	88.000	Nannospalax_galili
ENSMZEG00005020645	prdm5	100	88.963	ENSNBRG00000004976	prdm5	100	94.755	Neolamprologus_brichardi
ENSMZEG00005020645	prdm5	100	89.333	ENSNLEG00000009107	PRDM5	100	89.333	Nomascus_leucogenys
ENSMZEG00005020645	prdm5	85	83.051	ENSMEUG00000006576	-	71	83.051	Notamacropus_eugenii
ENSMZEG00005020645	prdm5	93	82.510	ENSOPRG00000011066	-	63	77.895	Ochotona_princeps
ENSMZEG00005020645	prdm5	99	88.667	ENSODEG00000009133	PRDM5	100	88.667	Octodon_degus
ENSMZEG00005020645	prdm5	100	92.675	ENSONIG00000003111	prdm5	99	92.675	Oreochromis_niloticus
ENSMZEG00005020645	prdm5	99	81.109	ENSOANG00000015109	PRDM5	97	80.698	Ornithorhynchus_anatinus
ENSMZEG00005020645	prdm5	53	95.556	ENSOANG00000006197	-	100	95.556	Ornithorhynchus_anatinus
ENSMZEG00005020645	prdm5	93	69.388	ENSOCUG00000013454	PRDM5	100	70.068	Oryctolagus_cuniculus
ENSMZEG00005020645	prdm5	100	97.453	ENSORLG00000016247	prdm5	100	97.453	Oryzias_latipes
ENSMZEG00005020645	prdm5	100	97.445	ENSORLG00020018051	prdm5	100	97.445	Oryzias_latipes_hni
ENSMZEG00005020645	prdm5	100	97.453	ENSORLG00015013760	prdm5	100	97.453	Oryzias_latipes_hsok
ENSMZEG00005020645	prdm5	100	97.627	ENSOMEG00000005143	prdm5	100	97.627	Oryzias_melastigma
ENSMZEG00005020645	prdm5	83	67.857	ENSOGAG00000009996	PRDM5	98	69.030	Otolemur_garnettii
ENSMZEG00005020645	prdm5	95	76.723	ENSOARG00000015473	PRDM5	100	72.707	Ovis_aries
ENSMZEG00005020645	prdm5	95	81.359	ENSPPAG00000043045	PRDM5	100	80.777	Pan_paniscus
ENSMZEG00005020645	prdm5	100	81.167	ENSPPRG00000001020	PRDM5	100	80.833	Panthera_pardus
ENSMZEG00005020645	prdm5	95	80.844	ENSPTIG00000010807	PRDM5	95	80.316	Panthera_tigris_altaica
ENSMZEG00005020645	prdm5	100	89.333	ENSPTRG00000016403	PRDM5	100	89.333	Pan_troglodytes
ENSMZEG00005020645	prdm5	100	89.333	ENSPANG00000023612	PRDM5	100	89.333	Papio_anubis
ENSMZEG00005020645	prdm5	99	62.619	ENSPKIG00000015492	prdm5	100	67.450	Paramormyrops_kingsleyae
ENSMZEG00005020645	prdm5	100	81.861	ENSPSIG00000013505	PRDM5	100	81.546	Pelodiscus_sinensis
ENSMZEG00005020645	prdm5	100	93.729	ENSPMGG00000012622	prdm5	100	93.898	Periophthalmus_magnuspinnatus
ENSMZEG00005020645	prdm5	74	69.007	ENSPMAG00000005248	prdm5	100	69.976	Petromyzon_marinus
ENSMZEG00005020645	prdm5	98	95.418	ENSPFOG00000018630	prdm5	99	95.418	Poecilia_formosa
ENSMZEG00005020645	prdm5	100	93.538	ENSPLAG00000014148	prdm5	100	93.538	Poecilia_latipinna
ENSMZEG00005020645	prdm5	100	98.472	ENSPMEG00000018002	prdm5	100	98.472	Poecilia_mexicana
ENSMZEG00005020645	prdm5	100	98.472	ENSPREG00000018366	prdm5	100	98.472	Poecilia_reticulata
ENSMZEG00005020645	prdm5	100	77.655	ENSPPYG00000015031	PRDM5	100	77.338	Pongo_abelii
ENSMZEG00005020645	prdm5	95	71.667	ENSPCAG00000011671	PRDM5	100	71.333	Procavia_capensis
ENSMZEG00005020645	prdm5	100	88.667	ENSPCOG00000022828	PRDM5	100	88.667	Propithecus_coquereli
ENSMZEG00005020645	prdm5	95	73.333	ENSPVAG00000012309	PRDM5	100	73.333	Pteropus_vampyrus
ENSMZEG00005020645	prdm5	100	98.981	ENSPNYG00000012194	prdm5	100	98.981	Pundamilia_nyererei
ENSMZEG00005020645	prdm5	100	92.929	ENSPNAG00000026181	prdm5	100	93.434	Pygocentrus_nattereri
ENSMZEG00005020645	prdm5	93	79.966	ENSPNAG00000023191	-	100	82.173	Pygocentrus_nattereri
ENSMZEG00005020645	prdm5	99	78.136	ENSRNOG00000023679	Prdm5	99	78.674	Rattus_norvegicus
ENSMZEG00005020645	prdm5	100	89.333	ENSRBIG00000041307	PRDM5	100	89.333	Rhinopithecus_bieti
ENSMZEG00005020645	prdm5	94	68.765	ENSRROG00000035343	PRDM5	100	72.583	Rhinopithecus_roxellana
ENSMZEG00005020645	prdm5	100	89.333	ENSSBOG00000022100	PRDM5	100	89.333	Saimiri_boliviensis_boliviensis
ENSMZEG00005020645	prdm5	90	73.824	ENSSHAG00000003250	PRDM5	100	75.051	Sarcophilus_harrisii
ENSMZEG00005020645	prdm5	100	86.689	ENSSFOG00015020478	prdm5	100	86.855	Scleropages_formosus
ENSMZEG00005020645	prdm5	100	97.627	ENSSMAG00000018844	prdm5	100	97.627	Scophthalmus_maximus
ENSMZEG00005020645	prdm5	100	97.797	ENSSDUG00000020397	prdm5	100	97.797	Seriola_dumerili
ENSMZEG00005020645	prdm5	100	97.797	ENSSLDG00000013353	prdm5	100	97.797	Seriola_lalandi_dorsalis
ENSMZEG00005020645	prdm5	88	89.744	ENSSARG00000014129	-	63	89.744	Sorex_araneus
ENSMZEG00005020645	prdm5	100	96.000	ENSSPUG00000009941	PRDM5	100	96.000	Sphenodon_punctatus
ENSMZEG00005020645	prdm5	100	93.387	ENSSPAG00000013866	prdm5	100	93.387	Stegastes_partitus
ENSMZEG00005020645	prdm5	100	81.667	ENSSSCG00000009101	PRDM5	100	80.833	Sus_scrofa
ENSMZEG00005020645	prdm5	95	81.000	ENSTGUG00000001920	PRDM5	100	82.000	Taeniopygia_guttata
ENSMZEG00005020645	prdm5	100	94.604	ENSTRUG00000013850	prdm5	100	94.604	Takifugu_rubripes
ENSMZEG00005020645	prdm5	100	75.980	ENSTNIG00000005901	prdm5	100	76.412	Tetraodon_nigroviridis
ENSMZEG00005020645	prdm5	95	67.486	ENSTBEG00000015386	PRDM5	86	67.114	Tupaia_belangeri
ENSMZEG00005020645	prdm5	100	76.387	ENSTTRG00000010996	PRDM5	100	75.753	Tursiops_truncatus
ENSMZEG00005020645	prdm5	95	87.607	ENSUAMG00000009994	PRDM5	76	87.607	Ursus_americanus
ENSMZEG00005020645	prdm5	95	88.924	ENSUMAG00000003733	PRDM5	99	79.613	Ursus_maritimus
ENSMZEG00005020645	prdm5	97	68.026	ENSVPAG00000007435	PRDM5	100	67.537	Vicugna_pacos
ENSMZEG00005020645	prdm5	93	76.190	ENSVVUG00000013192	PRDM5	100	75.850	Vulpes_vulpes
ENSMZEG00005020645	prdm5	100	78.797	ENSXETG00000002101	prdm5	100	77.848	Xenopus_tropicalis
ENSMZEG00005020645	prdm5	100	98.136	ENSXCOG00000008567	prdm5	100	98.136	Xiphophorus_couchianus
ENSMZEG00005020645	prdm5	100	98.136	ENSXMAG00000013825	prdm5	100	98.136	Xiphophorus_maculatus