EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005020658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 7293 bases
Position: chrLG20:7530290-7537582
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005027707	RRM_1	PF00076.22	2.2e-31	1	2
ENSMZEP00005027707	RRM_1	PF00076.22	2.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005028587	-	864	-	ENSMZEP00005027707	287 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005020658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005020658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005020658	-	60	82.873	ENSG00000124193	SRSF6	98	58.333	Homo_sapiens
ENSMZEG00005020658	-	60	65.934	ENSAMEG00000003710	SRSF6	53	67.033	Ailuropoda_melanoleuca
ENSMZEG00005020658	-	94	77.855	ENSACIG00000023658	-	78	81.600	Amphilophus_citrinellus
ENSMZEG00005020658	-	75	73.451	ENSACIG00000020091	-	95	77.165	Amphilophus_citrinellus
ENSMZEG00005020658	-	60	83.146	ENSAOCG00000004309	-	56	83.146	Amphiprion_ocellaris
ENSMZEG00005020658	-	60	80.220	ENSAPEG00000020746	-	64	80.220	Amphiprion_percula
ENSMZEG00005020658	-	60	85.246	ENSAPEG00000013086	-	77	69.288	Amphiprion_percula
ENSMZEG00005020658	-	89	60.150	ENSATEG00000007255	-	70	78.571	Anabas_testudineus
ENSMZEG00005020658	-	60	82.873	ENSANAG00000024080	SRSF6	98	58.333	Aotus_nancymaae
ENSMZEG00005020658	-	60	78.804	ENSAMXG00000042692	-	96	76.296	Astyanax_mexicanus
ENSMZEG00005020658	-	60	82.873	ENSBTAG00000008527	SRSF6	98	59.091	Bos_taurus
ENSMZEG00005020658	-	60	82.873	ENSCJAG00000048403	SRSF6	98	58.333	Callithrix_jacchus
ENSMZEG00005020658	-	60	82.873	ENSCAFG00000009289	SRSF6	98	59.091	Canis_familiaris
ENSMZEG00005020658	-	60	82.873	ENSCAFG00020013559	SRSF6	98	59.091	Canis_lupus_dingo
ENSMZEG00005020658	-	60	81.768	ENSCHIG00000009148	-	52	82.873	Capra_hircus
ENSMZEG00005020658	-	60	82.873	ENSCHIG00000015890	-	98	59.091	Capra_hircus
ENSMZEG00005020658	-	54	83.030	ENSCPOG00000011761	SRSF6	98	58.333	Cavia_porcellus
ENSMZEG00005020658	-	60	82.873	ENSCCAG00000026018	-	98	58.333	Cebus_capucinus
ENSMZEG00005020658	-	59	74.011	ENSCCAG00000018540	-	58	73.184	Cebus_capucinus
ENSMZEG00005020658	-	60	82.873	ENSCATG00000030794	SRSF6	98	58.333	Cercocebus_atys
ENSMZEG00005020658	-	64	64.167	ENSCLAG00000010247	SRSF6	98	58.333	Chinchilla_lanigera
ENSMZEG00005020658	-	60	82.609	ENSCPBG00000018200	SRSF6	87	63.455	Chrysemys_picta_bellii
ENSMZEG00005020658	-	60	82.873	ENSCGRG00001022339	Srsf6	98	58.333	Cricetulus_griseus_chok1gshd
ENSMZEG00005020658	-	60	82.162	ENSDARG00000016783	srsf6b	82	92.308	Danio_rerio
ENSMZEG00005020658	-	60	82.873	ENSDORG00000028378	Srsf6	98	58.333	Dipodomys_ordii
ENSMZEG00005020658	-	60	80.556	ENSETEG00000006221	SRSF6	52	81.111	Echinops_telfairi
ENSMZEG00005020658	-	60	82.873	ENSECAG00000023932	SRSF6	56	83.978	Equus_caballus
ENSMZEG00005020658	-	60	82.065	ENSELUG00000024182	SRSF6	90	76.423	Esox_lucius
ENSMZEG00005020658	-	56	89.506	ENSELUG00000013506	SRSF6	83	78.689	Esox_lucius
ENSMZEG00005020658	-	60	82.873	ENSFCAG00000032814	SRSF6	53	83.978	Felis_catus
ENSMZEG00005020658	-	96	69.010	ENSFHEG00000023065	srsf6a	54	86.667	Fundulus_heteroclitus
ENSMZEG00005020658	-	82	80.000	ENSGMOG00000014458	srsf6a	51	76.720	Gadus_morhua
ENSMZEG00005020658	-	60	81.622	ENSGALG00000000990	SRSF6	98	59.091	Gallus_gallus
ENSMZEG00005020658	-	95	59.366	ENSGACG00000006084	srsf6a	72	65.672	Gasterosteus_aculeatus
ENSMZEG00005020658	-	60	82.609	ENSGAGG00000003238	SRSF6	87	63.455	Gopherus_agassizii
ENSMZEG00005020658	-	60	82.873	ENSGGOG00000009808	SRSF6	98	58.333	Gorilla_gorilla
ENSMZEG00005020658	-	71	70.742	ENSHBUG00000006386	-	100	63.578	Haplochromis_burtoni
ENSMZEG00005020658	-	64	64.167	ENSHGLG00000007348	SRSF6	98	58.333	Heterocephalus_glaber_female
ENSMZEG00005020658	-	64	67.760	ENSHGLG00000007701	-	56	69.767	Heterocephalus_glaber_female
ENSMZEG00005020658	-	92	70.922	ENSHCOG00000002740	srsf6a	81	73.622	Hippocampus_comes
ENSMZEG00005020658	-	58	83.432	ENSIPUG00000016856	SRSF6	80	66.543	Ictalurus_punctatus
ENSMZEG00005020658	-	100	63.514	ENSIPUG00000004776	-	63	86.034	Ictalurus_punctatus
ENSMZEG00005020658	-	60	82.873	ENSSTOG00000010866	SRSF6	98	58.333	Ictidomys_tridecemlineatus
ENSMZEG00005020658	-	96	77.174	ENSKMAG00000011934	srsf6a	78	85.532	Kryptolebias_marmoratus
ENSMZEG00005020658	-	60	84.153	ENSLBEG00000007356	srsf6a	51	84.153	Labrus_bergylta
ENSMZEG00005020658	-	89	63.961	ENSLACG00000005466	SRSF6	80	64.312	Latimeria_chalumnae
ENSMZEG00005020658	-	60	82.873	ENSMFAG00000036925	SRSF6	98	58.333	Macaca_fascicularis
ENSMZEG00005020658	-	60	82.873	ENSMMUG00000006742	SRSF6	98	58.333	Macaca_mulatta
ENSMZEG00005020658	-	60	82.320	ENSMNEG00000027392	-	98	57.576	Macaca_nemestrina
ENSMZEG00005020658	-	60	86.885	ENSMAMG00000017161	srsf6a	62	74.312	Mastacembelus_armatus
ENSMZEG00005020658	-	71	68.534	ENSMZEG00005008032	-	100	62.975	Maylandia_zebra
ENSMZEG00005020658	-	60	82.320	ENSMICG00000008537	SRSF6	98	58.333	Microcebus_murinus
ENSMZEG00005020658	-	60	82.873	MGP_CAROLIEiJ_G0024606	Srsf6	98	58.333	Mus_caroli
ENSMZEG00005020658	-	60	82.873	ENSMUSG00000016921	Srsf6	98	58.333	Mus_musculus
ENSMZEG00005020658	-	60	82.873	MGP_PahariEiJ_G0026050	Srsf6	98	58.333	Mus_pahari
ENSMZEG00005020658	-	60	82.873	MGP_SPRETEiJ_G0025528	Srsf6	98	58.333	Mus_spretus
ENSMZEG00005020658	-	60	58.794	ENSMLUG00000016618	SRSF6	52	57.286	Myotis_lucifugus
ENSMZEG00005020658	-	60	82.873	ENSNGAG00000017560	Srsf6	98	58.333	Nannospalax_galili
ENSMZEG00005020658	-	60	81.921	ENSNBRG00000014709	-	100	63.898	Neolamprologus_brichardi
ENSMZEG00005020658	-	60	87.978	ENSNBRG00000001846	-	79	73.592	Neolamprologus_brichardi
ENSMZEG00005020658	-	60	82.873	ENSNLEG00000006524	SRSF6	98	58.333	Nomascus_leucogenys
ENSMZEG00005020658	-	60	81.868	ENSMEUG00000014615	SRSF6	60	82.967	Notamacropus_eugenii
ENSMZEG00005020658	-	95	73.163	ENSONIG00000001925	-	100	71.429	Oreochromis_niloticus
ENSMZEG00005020658	-	60	81.461	ENSONIG00000020247	-	52	82.022	Oreochromis_niloticus
ENSMZEG00005020658	-	59	51.462	ENSOCUG00000023999	-	70	52.632	Oryctolagus_cuniculus
ENSMZEG00005020658	-	64	54.237	ENSOCUG00000009785	-	62	65.775	Oryctolagus_cuniculus
ENSMZEG00005020658	-	50	69.799	ENSORLG00020017506	srsf6a	89	69.799	Oryzias_latipes_hni
ENSMZEG00005020658	-	60	76.301	ENSOMEG00000006001	srsf6a	52	70.918	Oryzias_melastigma
ENSMZEG00005020658	-	60	82.320	ENSOGAG00000014468	SRSF6	52	83.425	Otolemur_garnettii
ENSMZEG00005020658	-	60	79.444	ENSOARG00000003117	SRSF6	52	81.111	Ovis_aries
ENSMZEG00005020658	-	60	72.989	ENSPPAG00000043131	-	56	74.286	Pan_paniscus
ENSMZEG00005020658	-	60	82.873	ENSPPRG00000008917	SRSF6	53	83.978	Panthera_pardus
ENSMZEG00005020658	-	60	82.873	ENSPTRG00000044686	-	98	58.333	Pan_troglodytes
ENSMZEG00005020658	-	60	72.989	ENSPTRG00000046274	-	56	74.286	Pan_troglodytes
ENSMZEG00005020658	-	60	82.873	ENSPANG00000035224	SRSF6	98	58.333	Papio_anubis
ENSMZEG00005020658	-	60	72.222	ENSPKIG00000015703	-	97	63.636	Paramormyrops_kingsleyae
ENSMZEG00005020658	-	95	69.697	ENSPKIG00000018463	-	77	91.026	Paramormyrops_kingsleyae
ENSMZEG00005020658	-	96	68.182	ENSPMGG00000014963	srsf6a	54	87.845	Periophthalmus_magnuspinnatus
ENSMZEG00005020658	-	60	81.868	ENSPCIG00000003820	SRSF6	98	58.333	Phascolarctos_cinereus
ENSMZEG00005020658	-	97	64.264	ENSPLAG00000009243	srsf6a	80	80.315	Poecilia_latipinna
ENSMZEG00005020658	-	60	86.264	ENSPMEG00000006042	SRSF6	53	86.264	Poecilia_mexicana
ENSMZEG00005020658	-	60	81.215	ENSPCAG00000010954	SRSF6	55	82.320	Procavia_capensis
ENSMZEG00005020658	-	60	82.320	ENSPCOG00000026364	SRSF6	98	58.333	Propithecus_coquereli
ENSMZEG00005020658	-	60	87.978	ENSPNYG00000011272	-	50	87.978	Pundamilia_nyererei
ENSMZEG00005020658	-	60	81.921	ENSPNYG00000004944	-	100	63.578	Pundamilia_nyererei
ENSMZEG00005020658	-	51	44.907	ENSPNAG00000023145	-	56	43.382	Pygocentrus_nattereri
ENSMZEG00005020658	-	60	85.227	ENSRBIG00000041414	SRSF6	65	83.529	Rhinopithecus_bieti
ENSMZEG00005020658	-	60	82.873	ENSRROG00000029989	SRSF6	98	58.333	Rhinopithecus_roxellana
ENSMZEG00005020658	-	60	71.098	ENSSBOG00000034078	-	53	72.353	Saimiri_boliviensis_boliviensis
ENSMZEG00005020658	-	60	82.873	ENSSBOG00000033708	-	98	58.333	Saimiri_boliviensis_boliviensis
ENSMZEG00005020658	-	60	80.729	ENSSFOG00015019681	-	52	80.729	Scleropages_formosus
ENSMZEG00005020658	-	60	86.111	ENSSFOG00015015169	SRSF6	59	86.111	Scleropages_formosus
ENSMZEG00005020658	-	66	66.667	ENSSMAG00000014819	-	67	67.262	Scophthalmus_maximus
ENSMZEG00005020658	-	63	61.538	ENSSMAG00000017447	-	55	77.654	Scophthalmus_maximus
ENSMZEG00005020658	-	60	86.885	ENSSDUG00000016097	srsf6a	62	76.744	Seriola_dumerili
ENSMZEG00005020658	-	60	86.885	ENSSLDG00000022841	srsf6a	77	70.522	Seriola_lalandi_dorsalis
ENSMZEG00005020658	-	60	84.916	ENSSPUG00000004967	SRSF6	98	59.091	Sphenodon_punctatus
ENSMZEG00005020658	-	96	68.166	ENSSPAG00000002362	srsf6a	66	86.022	Stegastes_partitus
ENSMZEG00005020658	-	60	82.873	ENSSSCG00000007362	SRSF6	60	83.978	Sus_scrofa
ENSMZEG00005020658	-	60	82.967	ENSTGUG00000003455	SRSF6	52	82.967	Taeniopygia_guttata
ENSMZEG00005020658	-	95	67.647	ENSTNIG00000001692	srsf6a	84	71.168	Tetraodon_nigroviridis
ENSMZEG00005020658	-	60	82.873	ENSUAMG00000003559	SRSF6	98	59.091	Ursus_americanus
ENSMZEG00005020658	-	60	85.475	ENSXMAG00000021849	srsf6a	54	87.709	Xiphophorus_maculatus