EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005020709 (Gene tree)
Gene ID: 101478977
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 58733 bases
Position: chrLG12:32025409-32084141
Accession: 101478977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005027804	ResIII	PF04851.15	2.1e-08	1	1
ENSMZEP00005027794	ResIII	PF04851.15	2.1e-08	1	1
ENSMZEP00005027794	BRK	PF07533.16	1.9e-17	1	1
ENSMZEP00005027804	BRK	PF07533.16	2.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005028681	SMARCA2-201	8662	XM_014408140	ENSMZEP00005027794	1585 (aa)	XP_014263626	UPI0006CEE038
ENSMZET00005028691	SMARCA2-202	4713	-	ENSMZEP00005027804	1570 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005020709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005020709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005020709	SMARCA2	97	80.670	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSMZEG00005020709	SMARCA2	100	93.695	ENSAPOG00000002641	SMARCA2	100	93.695	Acanthochromis_polyacanthus
ENSMZEG00005020709	SMARCA2	88	77.388	ENSAMEG00000012325	SMARCA2	99	85.915	Ailuropoda_melanoleuca
ENSMZEG00005020709	SMARCA2	100	92.946	ENSACIG00000015607	SMARCA2	99	94.441	Amphilophus_citrinellus
ENSMZEG00005020709	SMARCA2	100	94.266	ENSAOCG00000009647	-	100	94.014	Amphiprion_ocellaris
ENSMZEG00005020709	SMARCA2	100	93.821	ENSAPEG00000007646	SMARCA2	100	93.821	Amphiprion_percula
ENSMZEG00005020709	SMARCA2	99	93.614	ENSATEG00000006916	SMARCA2	98	93.231	Anabas_testudineus
ENSMZEG00005020709	SMARCA2	87	78.348	ENSAPLG00000013873	SMARCA2	93	77.640	Anas_platyrhynchos
ENSMZEG00005020709	SMARCA2	97	80.155	ENSACAG00000002423	SMARCA2	100	80.113	Anolis_carolinensis
ENSMZEG00005020709	SMARCA2	97	80.412	ENSANAG00000026498	SMARCA2	100	80.528	Aotus_nancymaae
ENSMZEG00005020709	SMARCA2	98	99.870	ENSACLG00000004248	SMARCA2	99	99.870	Astatotilapia_calliptera
ENSMZEG00005020709	SMARCA2	99	85.759	ENSAMXG00000012404	smarca2	100	84.975	Astyanax_mexicanus
ENSMZEG00005020709	SMARCA2	96	81.584	ENSBTAG00000007494	SMARCA2	99	81.918	Bos_taurus
ENSMZEG00005020709	SMARCA2	97	80.779	ENSCJAG00000010710	SMARCA2	99	81.361	Callithrix_jacchus
ENSMZEG00005020709	SMARCA2	96	82.454	ENSCAFG00000002013	SMARCA2	99	82.124	Canis_familiaris
ENSMZEG00005020709	SMARCA2	74	87.113	ENSCAFG00020026802	SMARCA2	94	86.942	Canis_lupus_dingo
ENSMZEG00005020709	SMARCA2	96	81.716	ENSCHIG00000025863	SMARCA2	99	81.918	Capra_hircus
ENSMZEG00005020709	SMARCA2	96	79.125	ENSTSYG00000003858	SMARCA2	99	80.496	Carlito_syrichta
ENSMZEG00005020709	SMARCA2	97	78.766	ENSCAPG00000002890	SMARCA2	99	78.292	Cavia_aperea
ENSMZEG00005020709	SMARCA2	97	80.467	ENSCPOG00000005475	SMARCA2	100	80.528	Cavia_porcellus
ENSMZEG00005020709	SMARCA2	97	80.606	ENSCCAG00000030636	SMARCA2	100	80.716	Cebus_capucinus
ENSMZEG00005020709	SMARCA2	97	78.880	ENSCATG00000031470	SMARCA2	100	80.427	Cercocebus_atys
ENSMZEG00005020709	SMARCA2	97	80.273	ENSCLAG00000014484	SMARCA2	100	80.590	Chinchilla_lanigera
ENSMZEG00005020709	SMARCA2	91	82.000	ENSCSAG00000008650	SMARCA2	99	82.114	Chlorocebus_sabaeus
ENSMZEG00005020709	SMARCA2	83	81.690	ENSCHOG00000004316	SMARCA2	86	81.690	Choloepus_hoffmanni
ENSMZEG00005020709	SMARCA2	97	81.093	ENSCPBG00000025463	SMARCA2	100	83.077	Chrysemys_picta_bellii
ENSMZEG00005020709	SMARCA2	97	80.735	ENSCANG00000039597	SMARCA2	100	80.779	Colobus_angolensis_palliatus
ENSMZEG00005020709	SMARCA2	96	76.029	ENSCGRG00001002323	Smarca2	100	75.063	Cricetulus_griseus_chok1gshd
ENSMZEG00005020709	SMARCA2	98	87.725	ENSCSEG00000019311	SMARCA2	99	87.661	Cynoglossus_semilaevis
ENSMZEG00005020709	SMARCA2	85	87.908	ENSCVAG00000016571	SMARCA2	98	88.473	Cyprinodon_variegatus
ENSMZEG00005020709	SMARCA2	100	85.285	ENSDARG00000008904	smarca2	100	84.596	Danio_rerio
ENSMZEG00005020709	SMARCA2	97	80.294	ENSDNOG00000006402	SMARCA2	99	80.843	Dasypus_novemcinctus
ENSMZEG00005020709	SMARCA2	96	80.993	ENSDORG00000014832	Smarca2	100	80.402	Dipodomys_ordii
ENSMZEG00005020709	SMARCA2	76	62.231	FBgn0000212	brm	83	56.770	Drosophila_melanogaster
ENSMZEG00005020709	SMARCA2	89	61.057	ENSEBUG00000002449	-	93	64.291	Eptatretus_burgeri
ENSMZEG00005020709	SMARCA2	94	69.705	ENSEBUG00000011442	-	97	69.786	Eptatretus_burgeri
ENSMZEG00005020709	SMARCA2	96	81.794	ENSEASG00005010312	SMARCA2	99	81.671	Equus_asinus_asinus
ENSMZEG00005020709	SMARCA2	61	88.235	ENSEEUG00000015540	-	69	83.562	Erinaceus_europaeus
ENSMZEG00005020709	SMARCA2	95	83.882	ENSELUG00000010318	smarca2	99	82.294	Esox_lucius
ENSMZEG00005020709	SMARCA2	97	80.461	ENSFCAG00000001568	SMARCA2	99	81.930	Felis_catus
ENSMZEG00005020709	SMARCA2	97	80.579	ENSFALG00000010416	SMARCA2	100	81.959	Ficedula_albicollis
ENSMZEG00005020709	SMARCA2	97	79.507	ENSFDAG00000010502	SMARCA2	99	79.609	Fukomys_damarensis
ENSMZEG00005020709	SMARCA2	100	92.067	ENSFHEG00000021250	SMARCA2	100	92.000	Fundulus_heteroclitus
ENSMZEG00005020709	SMARCA2	99	82.689	ENSGMOG00000014229	SMARCA2	99	83.441	Gadus_morhua
ENSMZEG00005020709	SMARCA2	97	80.836	ENSGALG00000010164	SMARCA2	100	80.251	Gallus_gallus
ENSMZEG00005020709	SMARCA2	95	83.201	ENSGAFG00000001164	SMARCA2	95	83.712	Gambusia_affinis
ENSMZEG00005020709	SMARCA2	99	89.079	ENSGACG00000014488	SMARCA2	99	88.317	Gasterosteus_aculeatus
ENSMZEG00005020709	SMARCA2	97	80.900	ENSGAGG00000024412	SMARCA2	100	80.251	Gopherus_agassizii
ENSMZEG00005020709	SMARCA2	88	86.694	ENSGGOG00000000513	SMARCA2	98	80.130	Gorilla_gorilla
ENSMZEG00005020709	SMARCA2	100	99.428	ENSHBUG00000006691	SMARCA2	100	99.428	Haplochromis_burtoni
ENSMZEG00005020709	SMARCA2	96	79.884	ENSHGLG00000005215	SMARCA2	100	79.289	Heterocephalus_glaber_female
ENSMZEG00005020709	SMARCA2	96	81.722	ENSHGLG00100010496	SMARCA2	99	81.990	Heterocephalus_glaber_male
ENSMZEG00005020709	SMARCA2	88	83.887	ENSHCOG00000015348	-	97	86.364	Hippocampus_comes
ENSMZEG00005020709	SMARCA2	99	84.051	ENSIPUG00000011060	smarca2	100	82.477	Ictalurus_punctatus
ENSMZEG00005020709	SMARCA2	97	80.412	ENSSTOG00000006812	SMARCA2	100	80.528	Ictidomys_tridecemlineatus
ENSMZEG00005020709	SMARCA2	96	81.254	ENSJJAG00000010867	Smarca2	100	80.263	Jaculus_jaculus
ENSMZEG00005020709	SMARCA2	100	92.389	ENSKMAG00000015844	-	100	92.135	Kryptolebias_marmoratus
ENSMZEG00005020709	SMARCA2	97	83.323	ENSLOCG00000011499	smarca2	99	82.614	Lepisosteus_oculatus
ENSMZEG00005020709	SMARCA2	97	80.013	ENSLAFG00000014061	SMARCA2	100	79.812	Loxodonta_africana
ENSMZEG00005020709	SMARCA2	95	80.590	ENSMFAG00000003814	SMARCA2	99	82.001	Macaca_fascicularis
ENSMZEG00005020709	SMARCA2	97	80.735	ENSMMUG00000015279	SMARCA2	100	80.779	Macaca_mulatta
ENSMZEG00005020709	SMARCA2	95	80.799	ENSMNEG00000041069	SMARCA2	100	80.364	Macaca_nemestrina
ENSMZEG00005020709	SMARCA2	91	86.407	ENSMLEG00000027418	SMARCA2	99	81.564	Mandrillus_leucophaeus
ENSMZEG00005020709	SMARCA2	100	92.581	ENSMAMG00000003056	SMARCA2	100	92.269	Mastacembelus_armatus
ENSMZEG00005020709	SMARCA2	75	68.428	ENSMGAG00000005160	-	100	67.900	Meleagris_gallopavo
ENSMZEG00005020709	SMARCA2	96	81.669	ENSMICG00000005162	SMARCA2	100	80.716	Microcebus_murinus
ENSMZEG00005020709	SMARCA2	97	80.759	ENSMOCG00000001611	Smarca2	100	80.489	Microtus_ochrogaster
ENSMZEG00005020709	SMARCA2	99	86.573	ENSMMOG00000014196	SMARCA2	99	86.893	Mola_mola
ENSMZEG00005020709	SMARCA2	97	80.695	ENSMODG00000003578	SMARCA2	100	80.552	Monodelphis_domestica
ENSMZEG00005020709	SMARCA2	98	92.566	ENSMALG00000009611	SMARCA2	99	92.437	Monopterus_albus
ENSMZEG00005020709	SMARCA2	95	80.769	MGP_CAROLIEiJ_G0022841	Smarca2	100	79.975	Mus_caroli
ENSMZEG00005020709	SMARCA2	97	80.309	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSMZEG00005020709	SMARCA2	97	80.707	MGP_PahariEiJ_G0014334	Smarca2	100	80.062	Mus_pahari
ENSMZEG00005020709	SMARCA2	95	80.769	MGP_SPRETEiJ_G0023759	Smarca2	97	90.909	Mus_spretus
ENSMZEG00005020709	SMARCA2	79	85.984	ENSMPUG00000005171	SMARCA2	94	85.714	Mustela_putorius_furo
ENSMZEG00005020709	SMARCA2	97	76.613	ENSMLUG00000002342	SMARCA2	99	76.681	Myotis_lucifugus
ENSMZEG00005020709	SMARCA2	96	80.155	ENSNGAG00000000108	Smarca2	99	79.962	Nannospalax_galili
ENSMZEG00005020709	SMARCA2	95	81.308	ENSNBRG00000017998	SMARCA2	93	100.000	Neolamprologus_brichardi
ENSMZEG00005020709	SMARCA2	91	85.669	ENSNLEG00000008575	SMARCA2	99	80.425	Nomascus_leucogenys
ENSMZEG00005020709	SMARCA2	93	78.788	ENSMEUG00000009812	SMARCA2	99	74.469	Notamacropus_eugenii
ENSMZEG00005020709	SMARCA2	96	76.237	ENSOPRG00000013474	SMARCA2	100	76.445	Ochotona_princeps
ENSMZEG00005020709	SMARCA2	96	79.421	ENSODEG00000005452	SMARCA2	99	79.498	Octodon_degus
ENSMZEG00005020709	SMARCA2	99	97.739	ENSONIG00000014163	SMARCA2	99	97.739	Oreochromis_niloticus
ENSMZEG00005020709	SMARCA2	79	87.061	ENSOCUG00000006320	SMARCA2	100	80.414	Oryctolagus_cuniculus
ENSMZEG00005020709	SMARCA2	100	91.189	ENSORLG00000020820	SMARCA2	100	91.184	Oryzias_latipes
ENSMZEG00005020709	SMARCA2	100	91.499	ENSORLG00015006289	SMARCA2	100	91.688	Oryzias_latipes_hsok
ENSMZEG00005020709	SMARCA2	100	91.362	ENSOMEG00000009736	-	100	91.173	Oryzias_melastigma
ENSMZEG00005020709	SMARCA2	80	86.259	ENSOGAG00000017053	SMARCA2	99	79.267	Otolemur_garnettii
ENSMZEG00005020709	SMARCA2	96	79.830	ENSOARG00000013265	SMARCA2	99	81.125	Ovis_aries
ENSMZEG00005020709	SMARCA2	90	86.779	ENSPPAG00000038717	SMARCA2	100	81.679	Pan_paniscus
ENSMZEG00005020709	SMARCA2	97	80.525	ENSPPRG00000001879	SMARCA2	99	81.995	Panthera_pardus
ENSMZEG00005020709	SMARCA2	97	80.322	ENSPTRG00000051168	SMARCA2	100	80.439	Pan_troglodytes
ENSMZEG00005020709	SMARCA2	97	76.036	ENSPANG00000025121	SMARCA2	100	76.658	Papio_anubis
ENSMZEG00005020709	SMARCA2	100	84.635	ENSPKIG00000018469	-	100	83.816	Paramormyrops_kingsleyae
ENSMZEG00005020709	SMARCA2	97	80.231	ENSPSIG00000006284	SMARCA2	100	79.787	Pelodiscus_sinensis
ENSMZEG00005020709	SMARCA2	98	85.548	ENSPMGG00000013696	-	99	85.484	Periophthalmus_magnuspinnatus
ENSMZEG00005020709	SMARCA2	97	80.051	ENSPEMG00000019821	Smarca2	100	79.749	Peromyscus_maniculatus_bairdii
ENSMZEG00005020709	SMARCA2	95	70.817	ENSPMAG00000005337	-	97	70.006	Petromyzon_marinus
ENSMZEG00005020709	SMARCA2	96	82.041	ENSPCIG00000015658	SMARCA2	99	81.783	Phascolarctos_cinereus
ENSMZEG00005020709	SMARCA2	100	91.343	ENSPFOG00000001856	SMARCA2	100	91.343	Poecilia_formosa
ENSMZEG00005020709	SMARCA2	99	90.903	ENSPLAG00000017829	SMARCA2	96	90.645	Poecilia_latipinna
ENSMZEG00005020709	SMARCA2	99	90.834	ENSPMEG00000001815	-	99	90.524	Poecilia_mexicana
ENSMZEG00005020709	SMARCA2	100	90.535	ENSPREG00000013800	SMARCA2	100	90.280	Poecilia_reticulata
ENSMZEG00005020709	SMARCA2	97	79.376	ENSPPYG00000019258	SMARCA2	100	80.276	Pongo_abelii
ENSMZEG00005020709	SMARCA2	76	73.592	ENSPCAG00000016969	SMARCA2	78	73.592	Procavia_capensis
ENSMZEG00005020709	SMARCA2	96	79.632	ENSPCOG00000025709	SMARCA2	100	78.518	Propithecus_coquereli
ENSMZEG00005020709	SMARCA2	91	81.583	ENSPVAG00000000901	SMARCA2	93	83.253	Pteropus_vampyrus
ENSMZEG00005020709	SMARCA2	100	95.658	ENSPNYG00000004533	SMARCA2	100	95.658	Pundamilia_nyererei
ENSMZEG00005020709	SMARCA2	99	86.582	ENSPNAG00000014635	smarca2	98	86.266	Pygocentrus_nattereri
ENSMZEG00005020709	SMARCA2	97	79.784	ENSRNOG00000011931	Smarca2	100	79.123	Rattus_norvegicus
ENSMZEG00005020709	SMARCA2	95	80.577	ENSRBIG00000038618	SMARCA2	95	86.531	Rhinopithecus_bieti
ENSMZEG00005020709	SMARCA2	97	79.129	ENSRROG00000019271	SMARCA2	99	81.579	Rhinopithecus_roxellana
ENSMZEG00005020709	SMARCA2	91	86.120	ENSSBOG00000034827	SMARCA2	99	80.543	Saimiri_boliviensis_boliviensis
ENSMZEG00005020709	SMARCA2	97	80.940	ENSSHAG00000007884	SMARCA2	100	80.854	Sarcophilus_harrisii
ENSMZEG00005020709	SMARCA2	90	86.803	ENSSFOG00015014870	SMARCA2	97	87.545	Scleropages_formosus
ENSMZEG00005020709	SMARCA2	100	90.835	ENSSMAG00000013707	SMARCA2	100	90.960	Scophthalmus_maximus
ENSMZEG00005020709	SMARCA2	100	91.222	ENSSDUG00000008852	-	100	91.037	Seriola_dumerili
ENSMZEG00005020709	SMARCA2	98	89.778	ENSSLDG00000025449	SMARCA2	99	89.016	Seriola_lalandi_dorsalis
ENSMZEG00005020709	SMARCA2	93	72.989	ENSSARG00000007888	SMARCA2	93	78.808	Sorex_araneus
ENSMZEG00005020709	SMARCA2	95	77.953	ENSSPUG00000001629	SMARCA2	98	77.690	Sphenodon_punctatus
ENSMZEG00005020709	SMARCA2	100	94.336	ENSSPAG00000020091	-	100	94.336	Stegastes_partitus
ENSMZEG00005020709	SMARCA2	96	82.112	ENSSSCG00000005232	SMARCA2	99	81.983	Sus_scrofa
ENSMZEG00005020709	SMARCA2	97	80.386	ENSTGUG00000005460	SMARCA2	100	80.439	Taeniopygia_guttata
ENSMZEG00005020709	SMARCA2	99	89.729	ENSTRUG00000015619	SMARCA2	99	89.783	Takifugu_rubripes
ENSMZEG00005020709	SMARCA2	61	97.619	ENSTBEG00000008767	SMARCA2	68	97.619	Tupaia_belangeri
ENSMZEG00005020709	SMARCA2	93	79.973	ENSTTRG00000002033	SMARCA2	95	81.304	Tursiops_truncatus
ENSMZEG00005020709	SMARCA2	86	82.467	ENSUAMG00000024701	SMARCA2	99	81.746	Ursus_americanus
ENSMZEG00005020709	SMARCA2	89	75.000	ENSVPAG00000001204	SMARCA2	98	73.862	Vicugna_pacos
ENSMZEG00005020709	SMARCA2	74	86.781	ENSVVUG00000004598	SMARCA2	96	86.609	Vulpes_vulpes
ENSMZEG00005020709	SMARCA2	98	76.918	ENSXETG00000015299	smarca2	100	75.748	Xenopus_tropicalis
ENSMZEG00005020709	SMARCA2	90	87.439	ENSXCOG00000011073	SMARCA2	99	88.156	Xiphophorus_couchianus
ENSMZEG00005020709	SMARCA2	100	90.491	ENSXMAG00000015611	SMARCA2	100	90.423	Xiphophorus_maculatus