EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005020789 (Gene tree)
Gene ID: 101478102
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11180 bases
Position: chrLG3:17524915-17536094
Accession: 101478102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005027875	DUF382	PF04037.13	2.3e-58	1	1
ENSMZEP00005027875	SAP	PF02037.27	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005028763	-	3528	XM_004570662	ENSMZEP00005027875	859 (aa)	XP_004570719	UPI000329CBCC

Gene Model

Click here to download ENSMZEG00005020789's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005020789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005020789	sf3b2	86	74.708	ENSG00000087365	SF3B2	99	90.536	Homo_sapiens
ENSMZEG00005020789	sf3b2	97	90.566	ENSAPOG00000001974	sf3b2	96	90.629	Acanthochromis_polyacanthus
ENSMZEG00005020789	sf3b2	86	74.771	ENSAMEG00000017206	SF3B2	85	73.609	Ailuropoda_melanoleuca
ENSMZEG00005020789	sf3b2	100	89.015	ENSACIG00000000624	sf3b2	100	88.788	Amphilophus_citrinellus
ENSMZEG00005020789	sf3b2	100	87.126	ENSAOCG00000009207	sf3b2	100	89.323	Amphiprion_ocellaris
ENSMZEG00005020789	sf3b2	100	89.782	ENSAPEG00000002762	sf3b2	97	89.667	Amphiprion_percula
ENSMZEG00005020789	sf3b2	97	57.287	ENSACAG00000008615	SF3B2	85	60.131	Anolis_carolinensis
ENSMZEG00005020789	sf3b2	86	74.708	ENSANAG00000029120	SF3B2	86	73.032	Aotus_nancymaae
ENSMZEG00005020789	sf3b2	100	100.000	ENSACLG00000014771	sf3b2	100	100.000	Astatotilapia_calliptera
ENSMZEG00005020789	sf3b2	100	73.667	ENSAMXG00000007929	sf3b2	100	76.027	Astyanax_mexicanus
ENSMZEG00005020789	sf3b2	86	75.131	ENSBTAG00000002778	SF3B2	85	73.834	Bos_taurus
ENSMZEG00005020789	sf3b2	64	48.084	WBGene00021004	sftb-2	89	49.265	Caenorhabditis_elegans
ENSMZEG00005020789	sf3b2	86	74.838	ENSCJAG00000001656	SF3B2	86	73.161	Callithrix_jacchus
ENSMZEG00005020789	sf3b2	86	74.738	ENSCAFG00000013033	SF3B2	85	73.575	Canis_familiaris
ENSMZEG00005020789	sf3b2	86	74.738	ENSCAFG00020015382	SF3B2	85	73.575	Canis_lupus_dingo
ENSMZEG00005020789	sf3b2	86	75.000	ENSCHIG00000011211	SF3B2	85	73.834	Capra_hircus
ENSMZEG00005020789	sf3b2	86	74.902	ENSTSYG00000000959	SF3B2	97	66.743	Carlito_syrichta
ENSMZEG00005020789	sf3b2	76	71.095	ENSCPOG00000008294	SF3B2	84	68.795	Cavia_porcellus
ENSMZEG00005020789	sf3b2	86	74.838	ENSCCAG00000035256	SF3B2	86	73.161	Cebus_capucinus
ENSMZEG00005020789	sf3b2	86	74.708	ENSCATG00000042240	SF3B2	88	73.032	Cercocebus_atys
ENSMZEG00005020789	sf3b2	86	73.595	ENSCLAG00000016852	SF3B2	86	71.613	Chinchilla_lanigera
ENSMZEG00005020789	sf3b2	86	74.708	ENSCSAG00000008121	SF3B2	86	73.032	Chlorocebus_sabaeus
ENSMZEG00005020789	sf3b2	89	88.265	ENSCHOG00000001476	SF3B2	78	80.612	Choloepus_hoffmanni
ENSMZEG00005020789	sf3b2	86	73.212	ENSCPBG00000022465	SF3B2	87	80.408	Chrysemys_picta_bellii
ENSMZEG00005020789	sf3b2	61	67.871	ENSCING00000005665	-	84	67.552	Ciona_intestinalis
ENSMZEG00005020789	sf3b2	73	60.577	ENSCSAVG00000002029	-	99	58.786	Ciona_savignyi
ENSMZEG00005020789	sf3b2	86	74.708	ENSCANG00000039680	SF3B2	86	73.032	Colobus_angolensis_palliatus
ENSMZEG00005020789	sf3b2	84	74.431	ENSCGRG00001015741	Sf3b2	86	71.871	Cricetulus_griseus_chok1gshd
ENSMZEG00005020789	sf3b2	84	74.431	ENSCGRG00000018110	Sf3b2	88	71.871	Cricetulus_griseus_crigri
ENSMZEG00005020789	sf3b2	86	80.485	ENSCSEG00000000230	sf3b2	89	79.706	Cynoglossus_semilaevis
ENSMZEG00005020789	sf3b2	100	84.713	ENSCVAG00000003357	sf3b2	100	83.908	Cyprinodon_variegatus
ENSMZEG00005020789	sf3b2	97	72.203	ENSDARG00000018049	sf3b2	99	71.889	Danio_rerio
ENSMZEG00005020789	sf3b2	97	68.927	ENSDNOG00000009484	SF3B2	94	73.446	Dasypus_novemcinctus
ENSMZEG00005020789	sf3b2	84	73.896	ENSDORG00000002495	Sf3b2	85	71.742	Dipodomys_ordii
ENSMZEG00005020789	sf3b2	70	81.567	ENSETEG00000020284	SF3B2	69	81.499	Echinops_telfairi
ENSMZEG00005020789	sf3b2	89	62.302	ENSEBUG00000013703	sf3b2	99	56.142	Eptatretus_burgeri
ENSMZEG00005020789	sf3b2	86	74.641	ENSEASG00005004508	SF3B2	85	73.196	Equus_asinus_asinus
ENSMZEG00005020789	sf3b2	86	74.641	ENSECAG00000024461	SF3B2	85	73.196	Equus_caballus
ENSMZEG00005020789	sf3b2	58	85.833	ENSEEUG00000014278	-	58	85.833	Erinaceus_europaeus
ENSMZEG00005020789	sf3b2	100	78.564	ENSELUG00000005586	sf3b2	100	78.672	Esox_lucius
ENSMZEG00005020789	sf3b2	86	74.869	ENSFCAG00000013289	SF3B2	85	73.705	Felis_catus
ENSMZEG00005020789	sf3b2	78	66.815	ENSFALG00000014653	SF3B2	93	64.688	Ficedula_albicollis
ENSMZEG00005020789	sf3b2	86	74.223	ENSFDAG00000019806	SF3B2	86	72.506	Fukomys_damarensis
ENSMZEG00005020789	sf3b2	100	83.827	ENSFHEG00000020968	sf3b2	100	83.371	Fundulus_heteroclitus
ENSMZEG00005020789	sf3b2	76	87.234	ENSGMOG00000012131	sf3b2	100	86.970	Gadus_morhua
ENSMZEG00005020789	sf3b2	100	84.114	ENSGAFG00000001675	sf3b2	100	84.000	Gambusia_affinis
ENSMZEG00005020789	sf3b2	76	88.754	ENSGACG00000019012	sf3b2	100	88.754	Gasterosteus_aculeatus
ENSMZEG00005020789	sf3b2	98	68.259	ENSGAGG00000023916	SF3B2	86	74.215	Gopherus_agassizii
ENSMZEG00005020789	sf3b2	77	90.141	ENSGGOG00000028448	SF3B2	84	90.141	Gorilla_gorilla
ENSMZEG00005020789	sf3b2	100	99.534	ENSHBUG00000017349	sf3b2	100	99.534	Haplochromis_burtoni
ENSMZEG00005020789	sf3b2	84	73.971	ENSHGLG00000010807	SF3B2	86	71.613	Heterocephalus_glaber_female
ENSMZEG00005020789	sf3b2	86	74.708	ENSHGLG00100006361	SF3B2	86	72.903	Heterocephalus_glaber_male
ENSMZEG00005020789	sf3b2	100	79.657	ENSHCOG00000016203	sf3b2	100	79.496	Hippocampus_comes
ENSMZEG00005020789	sf3b2	100	72.848	ENSIPUG00000009383	sf3b2	100	72.338	Ictalurus_punctatus
ENSMZEG00005020789	sf3b2	86	74.578	ENSSTOG00000028892	SF3B2	86	72.903	Ictidomys_tridecemlineatus
ENSMZEG00005020789	sf3b2	84	73.580	ENSJJAG00000018193	Sf3b2	86	71.502	Jaculus_jaculus
ENSMZEG00005020789	sf3b2	100	83.201	ENSKMAG00000020181	sf3b2	100	83.087	Kryptolebias_marmoratus
ENSMZEG00005020789	sf3b2	100	88.927	ENSLBEG00000027739	sf3b2	100	89.041	Labrus_bergylta
ENSMZEG00005020789	sf3b2	83	80.251	ENSLACG00000010429	SF3B2	100	65.604	Latimeria_chalumnae
ENSMZEG00005020789	sf3b2	84	74.000	ENSLAFG00000002128	SF3B2	85	71.891	Loxodonta_africana
ENSMZEG00005020789	sf3b2	86	74.611	ENSMFAG00000003064	SF3B2	88	72.938	Macaca_fascicularis
ENSMZEG00005020789	sf3b2	86	70.665	ENSMMUG00000011743	SF3B2	86	69.301	Macaca_mulatta
ENSMZEG00005020789	sf3b2	86	74.708	ENSMNEG00000034437	SF3B2	88	73.032	Macaca_nemestrina
ENSMZEG00005020789	sf3b2	86	74.708	ENSMLEG00000029373	SF3B2	88	73.032	Mandrillus_leucophaeus
ENSMZEG00005020789	sf3b2	100	88.952	ENSMAMG00000014103	sf3b2	100	89.522	Mastacembelus_armatus
ENSMZEG00005020789	sf3b2	97	67.720	ENSMICG00000016942	-	97	65.486	Microcebus_murinus
ENSMZEG00005020789	sf3b2	86	74.968	ENSMICG00000008565	-	86	73.325	Microcebus_murinus
ENSMZEG00005020789	sf3b2	86	73.541	ENSMOCG00000003136	Sf3b2	86	71.613	Microtus_ochrogaster
ENSMZEG00005020789	sf3b2	100	82.488	ENSMMOG00000012928	sf3b2	87	85.582	Mola_mola
ENSMZEG00005020789	sf3b2	73	74.525	ENSMODG00000025020	-	99	72.118	Monodelphis_domestica
ENSMZEG00005020789	sf3b2	86	73.788	ENSMODG00000008490	-	93	72.809	Monodelphis_domestica
ENSMZEG00005020789	sf3b2	100	83.562	ENSMALG00000015137	sf3b2	86	85.450	Monopterus_albus
ENSMZEG00005020789	sf3b2	84	74.163	MGP_CAROLIEiJ_G0022539	Sf3b2	86	71.613	Mus_caroli
ENSMZEG00005020789	sf3b2	84	73.971	ENSMUSG00000024853	Sf3b2	86	71.742	Mus_musculus
ENSMZEG00005020789	sf3b2	84	73.705	MGP_PahariEiJ_G0014036	Sf3b2	86	71.613	Mus_pahari
ENSMZEG00005020789	sf3b2	84	73.838	MGP_SPRETEiJ_G0023453	Sf3b2	86	72.000	Mus_spretus
ENSMZEG00005020789	sf3b2	86	74.869	ENSMPUG00000011349	SF3B2	85	73.575	Mustela_putorius_furo
ENSMZEG00005020789	sf3b2	86	74.607	ENSMLUG00000011136	SF3B2	85	73.575	Myotis_lucifugus
ENSMZEG00005020789	sf3b2	84	73.572	ENSNGAG00000012103	Sf3b2	86	72.000	Nannospalax_galili
ENSMZEG00005020789	sf3b2	86	71.373	ENSNLEG00000006007	SF3B2	86	71.026	Nomascus_leucogenys
ENSMZEG00005020789	sf3b2	77	84.746	ENSMEUG00000000019	SF3B2	81	84.746	Notamacropus_eugenii
ENSMZEG00005020789	sf3b2	100	63.676	ENSODEG00000017764	SF3B2	84	68.277	Octodon_degus
ENSMZEG00005020789	sf3b2	100	96.211	ENSONIG00000013068	sf3b2	100	96.211	Oreochromis_niloticus
ENSMZEG00005020789	sf3b2	86	66.667	ENSOANG00000012482	SF3B2	87	81.854	Ornithorhynchus_anatinus
ENSMZEG00005020789	sf3b2	57	50.097	ENSOCUG00000024154	-	95	48.000	Oryctolagus_cuniculus
ENSMZEG00005020789	sf3b2	97	70.370	ENSOCUG00000015722	-	97	67.886	Oryctolagus_cuniculus
ENSMZEG00005020789	sf3b2	100	85.995	ENSORLG00000008235	sf3b2	97	85.121	Oryzias_latipes
ENSMZEG00005020789	sf3b2	100	85.995	ENSORLG00020005357	sf3b2	100	85.121	Oryzias_latipes_hni
ENSMZEG00005020789	sf3b2	100	86.227	ENSORLG00015022454	sf3b2	88	85.352	Oryzias_latipes_hsok
ENSMZEG00005020789	sf3b2	100	82.735	ENSOMEG00000017480	sf3b2	100	82.619	Oryzias_melastigma
ENSMZEG00005020789	sf3b2	86	70.404	ENSOGAG00000005799	SF3B2	86	69.744	Otolemur_garnettii
ENSMZEG00005020789	sf3b2	97	67.701	ENSOARG00000002125	SF3B2	100	75.337	Ovis_aries
ENSMZEG00005020789	sf3b2	86	74.708	ENSPPAG00000007359	SF3B2	86	73.032	Pan_paniscus
ENSMZEG00005020789	sf3b2	86	74.869	ENSPPRG00000013334	SF3B2	85	73.705	Panthera_pardus
ENSMZEG00005020789	sf3b2	86	74.869	ENSPTIG00000015022	SF3B2	85	73.705	Panthera_tigris_altaica
ENSMZEG00005020789	sf3b2	86	74.708	ENSPTRG00000003912	SF3B2	86	73.032	Pan_troglodytes
ENSMZEG00005020789	sf3b2	86	74.708	ENSPANG00000008593	SF3B2	88	73.032	Papio_anubis
ENSMZEG00005020789	sf3b2	100	76.207	ENSPKIG00000016576	sf3b2	100	76.517	Paramormyrops_kingsleyae
ENSMZEG00005020789	sf3b2	86	74.574	ENSPSIG00000003158	SF3B2	97	75.393	Pelodiscus_sinensis
ENSMZEG00005020789	sf3b2	86	79.839	ENSPMGG00000000819	sf3b2	87	78.278	Periophthalmus_magnuspinnatus
ENSMZEG00005020789	sf3b2	84	73.971	ENSPEMG00000015437	Sf3b2	86	71.742	Peromyscus_maniculatus_bairdii
ENSMZEG00005020789	sf3b2	86	66.093	ENSPEMG00000015451	-	90	67.945	Peromyscus_maniculatus_bairdii
ENSMZEG00005020789	sf3b2	86	73.622	ENSPCIG00000008381	SF3B2	89	73.806	Phascolarctos_cinereus
ENSMZEG00005020789	sf3b2	100	84.589	ENSPFOG00000002552	sf3b2	100	84.211	Poecilia_formosa
ENSMZEG00005020789	sf3b2	100	84.439	ENSPLAG00000001471	sf3b2	100	84.325	Poecilia_latipinna
ENSMZEG00005020789	sf3b2	100	84.343	ENSPMEG00000013180	sf3b2	100	83.849	Poecilia_mexicana
ENSMZEG00005020789	sf3b2	100	81.943	ENSPREG00000002665	sf3b2	100	83.314	Poecilia_reticulata
ENSMZEG00005020789	sf3b2	58	69.043	ENSPPYG00000003034	-	79	66.667	Pongo_abelii
ENSMZEG00005020789	sf3b2	86	75.130	ENSPCAG00000005129	SF3B2	85	73.187	Procavia_capensis
ENSMZEG00005020789	sf3b2	86	74.449	ENSPCOG00000025375	SF3B2	86	73.067	Propithecus_coquereli
ENSMZEG00005020789	sf3b2	54	93.421	ENSPVAG00000005466	-	81	93.421	Pteropus_vampyrus
ENSMZEG00005020789	sf3b2	92	96.567	ENSPNYG00000023594	sf3b2	100	96.567	Pundamilia_nyererei
ENSMZEG00005020789	sf3b2	100	75.196	ENSPNAG00000001891	sf3b2	100	75.224	Pygocentrus_nattereri
ENSMZEG00005020789	sf3b2	84	73.838	ENSRNOG00000020412	Sf3b2	86	71.613	Rattus_norvegicus
ENSMZEG00005020789	sf3b2	86	75.033	ENSRBIG00000034065	SF3B2	86	73.032	Rhinopithecus_bieti
ENSMZEG00005020789	sf3b2	86	75.033	ENSRROG00000034496	SF3B2	86	73.032	Rhinopithecus_roxellana
ENSMZEG00005020789	sf3b2	97	69.309	ENSSBOG00000026337	SF3B2	97	66.367	Saimiri_boliviensis_boliviensis
ENSMZEG00005020789	sf3b2	96	57.845	ENSSHAG00000018043	-	88	62.169	Sarcophilus_harrisii
ENSMZEG00005020789	sf3b2	86	70.619	ENSSHAG00000010933	-	85	70.207	Sarcophilus_harrisii
ENSMZEG00005020789	sf3b2	100	75.610	ENSSFOG00015021125	sf3b2	100	74.503	Scleropages_formosus
ENSMZEG00005020789	sf3b2	100	88.295	ENSSMAG00000004079	sf3b2	97	87.841	Scophthalmus_maximus
ENSMZEG00005020789	sf3b2	100	87.923	ENSSLDG00000006838	sf3b2	100	89.278	Seriola_lalandi_dorsalis
ENSMZEG00005020789	sf3b2	97	66.135	ENSSPUG00000009198	SF3B2	84	73.907	Sphenodon_punctatus
ENSMZEG00005020789	sf3b2	100	87.906	ENSSPAG00000004406	sf3b2	100	88.578	Stegastes_partitus
ENSMZEG00005020789	sf3b2	86	75.591	ENSSSCG00000012957	SF3B2	85	73.773	Sus_scrofa
ENSMZEG00005020789	sf3b2	90	80.645	ENSTRUG00000007611	sf3b2	99	80.645	Takifugu_rubripes
ENSMZEG00005020789	sf3b2	97	79.318	ENSTNIG00000007441	sf3b2	100	79.788	Tetraodon_nigroviridis
ENSMZEG00005020789	sf3b2	86	67.313	ENSTBEG00000004258	SF3B2	84	66.759	Tupaia_belangeri
ENSMZEG00005020789	sf3b2	86	75.131	ENSTTRG00000014339	SF3B2	85	73.964	Tursiops_truncatus
ENSMZEG00005020789	sf3b2	83	74.359	ENSUAMG00000020754	SF3B2	84	71.079	Ursus_americanus
ENSMZEG00005020789	sf3b2	86	74.869	ENSUMAG00000010994	SF3B2	85	73.705	Ursus_maritimus
ENSMZEG00005020789	sf3b2	59	85.000	ENSVPAG00000008695	SF3B2	64	85.000	Vicugna_pacos
ENSMZEG00005020789	sf3b2	86	74.738	ENSVVUG00000027029	SF3B2	85	73.575	Vulpes_vulpes
ENSMZEG00005020789	sf3b2	90	66.285	ENSXETG00000008422	sf3b2	94	68.200	Xenopus_tropicalis
ENSMZEG00005020789	sf3b2	87	76.975	ENSXCOG00000008943	sf3b2	93	76.070	Xiphophorus_couchianus
ENSMZEG00005020789	sf3b2	100	83.618	ENSXMAG00000008467	sf3b2	100	83.504	Xiphophorus_maculatus