EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005020830 (Gene tree)
Gene ID: 101474704
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 20988 bases
Position: chrLG23:9213652-9234639
Accession: 101474704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005027934	ResIII	PF04851.15	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005028819	-	2322	-	ENSMZEP00005027929	773 (aa)	-	-
ENSMZET00005028824	-	3060	XM_004557049	ENSMZEP00005027934	994 (aa)	XP_004557106	-

Gene Model

Click here to download ENSMZEG00005020830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005020830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005020830	chd1l	86	64.644	ENSG00000131778	CHD1L	99	64.725	Homo_sapiens
ENSMZEG00005020830	chd1l	92	87.486	ENSAPOG00000001539	chd1l	99	88.684	Acanthochromis_polyacanthus
ENSMZEG00005020830	chd1l	88	64.579	ENSAMEG00000017063	CHD1L	97	64.237	Ailuropoda_melanoleuca
ENSMZEG00005020830	chd1l	87	90.596	ENSACIG00000001164	chd1l	99	90.826	Amphilophus_citrinellus
ENSMZEG00005020830	chd1l	95	86.920	ENSAOCG00000014510	chd1l	93	87.553	Amphiprion_ocellaris
ENSMZEG00005020830	chd1l	87	84.677	ENSAPEG00000017573	chd1l	95	85.138	Amphiprion_percula
ENSMZEG00005020830	chd1l	87	85.780	ENSAPEG00000017450	chd1l	95	85.896	Amphiprion_percula
ENSMZEG00005020830	chd1l	95	85.325	ENSATEG00000013058	chd1l	94	85.325	Anabas_testudineus
ENSMZEG00005020830	chd1l	85	64.471	ENSAPLG00000009976	CHD1L	95	63.815	Anas_platyrhynchos
ENSMZEG00005020830	chd1l	86	62.457	ENSACAG00000017686	CHD1L	98	61.745	Anolis_carolinensis
ENSMZEG00005020830	chd1l	86	64.486	ENSANAG00000024347	CHD1L	97	63.667	Aotus_nancymaae
ENSMZEG00005020830	chd1l	100	99.799	ENSACLG00000019304	chd1l	100	99.799	Astatotilapia_calliptera
ENSMZEG00005020830	chd1l	95	62.448	ENSAMXG00000012367	chd1l	95	62.866	Astyanax_mexicanus
ENSMZEG00005020830	chd1l	87	65.429	ENSBTAG00000020831	CHD1L	97	64.773	Bos_taurus
ENSMZEG00005020830	chd1l	86	64.079	ENSCJAG00000002406	CHD1L	97	63.440	Callithrix_jacchus
ENSMZEG00005020830	chd1l	89	61.486	ENSCAFG00000010944	CHD1L	98	61.149	Canis_familiaris
ENSMZEG00005020830	chd1l	89	63.514	ENSCAFG00020020121	CHD1L	99	63.176	Canis_lupus_dingo
ENSMZEG00005020830	chd1l	88	64.960	ENSCHIG00000013871	CHD1L	97	64.960	Capra_hircus
ENSMZEG00005020830	chd1l	84	65.279	ENSTSYG00000003005	CHD1L	99	64.369	Carlito_syrichta
ENSMZEG00005020830	chd1l	86	62.457	ENSCPOG00000009000	CHD1L	97	61.758	Cavia_porcellus
ENSMZEG00005020830	chd1l	86	62.109	ENSCCAG00000036079	CHD1L	97	61.503	Cebus_capucinus
ENSMZEG00005020830	chd1l	86	64.542	ENSCATG00000031044	CHD1L	97	63.968	Cercocebus_atys
ENSMZEG00005020830	chd1l	86	64.925	ENSCLAG00000000880	CHD1L	97	64.384	Chinchilla_lanigera
ENSMZEG00005020830	chd1l	86	64.774	ENSCSAG00000018386	CHD1L	97	64.196	Chlorocebus_sabaeus
ENSMZEG00005020830	chd1l	86	65.928	ENSCPBG00000002600	CHD1L	97	65.212	Chrysemys_picta_bellii
ENSMZEG00005020830	chd1l	86	63.615	ENSCANG00000020239	CHD1L	97	63.056	Colobus_angolensis_palliatus
ENSMZEG00005020830	chd1l	87	64.557	ENSCGRG00001021624	Chd1l	99	63.524	Cricetulus_griseus_chok1gshd
ENSMZEG00005020830	chd1l	83	65.629	ENSCGRG00000007554	Chd1l	100	64.527	Cricetulus_griseus_crigri
ENSMZEG00005020830	chd1l	97	79.485	ENSCVAG00000002595	chd1l	98	79.794	Cyprinodon_variegatus
ENSMZEG00005020830	chd1l	95	70.072	ENSDARG00000015471	chd1l	94	71.162	Danio_rerio
ENSMZEG00005020830	chd1l	88	64.123	ENSDNOG00000019504	CHD1L	97	64.351	Dasypus_novemcinctus
ENSMZEG00005020830	chd1l	88	62.685	ENSDORG00000013555	Chd1l	97	63.740	Dipodomys_ordii
ENSMZEG00005020830	chd1l	80	61.296	ENSETEG00000008445	CHD1L	88	61.471	Echinops_telfairi
ENSMZEG00005020830	chd1l	65	53.358	ENSEBUG00000005791	chd1l	87	53.358	Eptatretus_burgeri
ENSMZEG00005020830	chd1l	88	64.278	ENSEASG00005007364	CHD1L	100	64.614	Equus_asinus_asinus
ENSMZEG00005020830	chd1l	88	63.936	ENSECAG00000008915	CHD1L	100	64.493	Equus_caballus
ENSMZEG00005020830	chd1l	95	60.309	ENSELUG00000016844	chd1l	93	60.515	Esox_lucius
ENSMZEG00005020830	chd1l	86	64.644	ENSFCAG00000007777	CHD1L	97	63.492	Felis_catus
ENSMZEG00005020830	chd1l	87	61.644	ENSFALG00000006087	CHD1L	96	62.215	Ficedula_albicollis
ENSMZEG00005020830	chd1l	84	65.006	ENSFDAG00000012431	CHD1L	99	63.986	Fukomys_damarensis
ENSMZEG00005020830	chd1l	95	81.474	ENSFHEG00000012420	chd1l	94	81.579	Fundulus_heteroclitus
ENSMZEG00005020830	chd1l	87	63.616	ENSGALG00000015038	CHD1L	96	63.616	Gallus_gallus
ENSMZEG00005020830	chd1l	95	81.002	ENSGAFG00000018198	chd1l	99	78.670	Gambusia_affinis
ENSMZEG00005020830	chd1l	51	84.540	ENSGACG00000014042	chd1l	98	84.540	Gasterosteus_aculeatus
ENSMZEG00005020830	chd1l	85	66.315	ENSGAGG00000014432	CHD1L	96	65.845	Gopherus_agassizii
ENSMZEG00005020830	chd1l	87	63.073	ENSGGOG00000001067	CHD1L	98	62.528	Gorilla_gorilla
ENSMZEG00005020830	chd1l	100	99.396	ENSHBUG00000007464	chd1l	100	99.396	Haplochromis_burtoni
ENSMZEG00005020830	chd1l	86	63.499	ENSHGLG00000008933	CHD1L	98	62.528	Heterocephalus_glaber_female
ENSMZEG00005020830	chd1l	84	62.545	ENSHGLG00100007155	CHD1L	99	61.682	Heterocephalus_glaber_male
ENSMZEG00005020830	chd1l	87	76.782	ENSHCOG00000012787	chd1l	94	77.241	Hippocampus_comes
ENSMZEG00005020830	chd1l	95	65.975	ENSIPUG00000022617	chd1l	94	66.149	Ictalurus_punctatus
ENSMZEG00005020830	chd1l	88	58.844	ENSSTOG00000007032	CHD1L	98	58.957	Ictidomys_tridecemlineatus
ENSMZEG00005020830	chd1l	95	83.158	ENSKMAG00000014358	chd1l	93	83.158	Kryptolebias_marmoratus
ENSMZEG00005020830	chd1l	95	81.081	ENSLBEG00000023845	chd1l	96	82.646	Labrus_bergylta
ENSMZEG00005020830	chd1l	94	59.058	ENSLACG00000006262	CHD1L	93	59.623	Latimeria_chalumnae
ENSMZEG00005020830	chd1l	95	70.464	ENSLOCG00000010574	chd1l	93	70.781	Lepisosteus_oculatus
ENSMZEG00005020830	chd1l	86	64.726	ENSLAFG00000018136	CHD1L	100	64.494	Loxodonta_africana
ENSMZEG00005020830	chd1l	85	64.184	ENSMFAG00000043562	CHD1L	99	64.372	Macaca_fascicularis
ENSMZEG00005020830	chd1l	86	64.658	ENSMMUG00000009024	CHD1L	97	64.082	Macaca_mulatta
ENSMZEG00005020830	chd1l	86	64.658	ENSMNEG00000039905	CHD1L	97	64.082	Macaca_nemestrina
ENSMZEG00005020830	chd1l	86	64.658	ENSMLEG00000030900	CHD1L	97	64.082	Mandrillus_leucophaeus
ENSMZEG00005020830	chd1l	95	83.421	ENSMAMG00000012822	chd1l	99	83.103	Mastacembelus_armatus
ENSMZEG00005020830	chd1l	86	63.763	ENSMGAG00000014304	CHD1L	99	64.111	Meleagris_gallopavo
ENSMZEG00005020830	chd1l	86	65.701	ENSMICG00000002497	CHD1L	96	65.108	Microcebus_murinus
ENSMZEG00005020830	chd1l	88	64.773	ENSMOCG00000006305	Chd1l	98	64.626	Microtus_ochrogaster
ENSMZEG00005020830	chd1l	87	75.858	ENSMMOG00000005964	chd1l	91	75.973	Mola_mola
ENSMZEG00005020830	chd1l	89	62.612	ENSMODG00000018717	CHD1L	99	62.612	Monodelphis_domestica
ENSMZEG00005020830	chd1l	95	85.158	ENSMALG00000014675	chd1l	93	85.368	Monopterus_albus
ENSMZEG00005020830	chd1l	88	64.874	MGP_CAROLIEiJ_G0025401	Chd1l	98	64.874	Mus_caroli
ENSMZEG00005020830	chd1l	86	65.087	ENSMUSG00000028089	Chd1l	98	64.579	Mus_musculus
ENSMZEG00005020830	chd1l	88	64.846	MGP_PahariEiJ_G0026845	Chd1l	98	64.846	Mus_pahari
ENSMZEG00005020830	chd1l	86	65.157	MGP_SPRETEiJ_G0026347	Chd1l	98	64.645	Mus_spretus
ENSMZEG00005020830	chd1l	88	64.172	ENSMPUG00000000615	CHD1L	97	64.059	Mustela_putorius_furo
ENSMZEG00005020830	chd1l	87	62.799	ENSMLUG00000007573	CHD1L	96	62.275	Myotis_lucifugus
ENSMZEG00005020830	chd1l	87	60.710	ENSNGAG00000000908	Chd1l	99	60.526	Nannospalax_galili
ENSMZEG00005020830	chd1l	87	93.226	ENSNBRG00000006021	chd1l	95	93.226	Neolamprologus_brichardi
ENSMZEG00005020830	chd1l	86	64.028	ENSNLEG00000000179	CHD1L	97	63.170	Nomascus_leucogenys
ENSMZEG00005020830	chd1l	86	55.491	ENSOPRG00000006973	CHD1L	99	55.491	Ochotona_princeps
ENSMZEG00005020830	chd1l	86	60.554	ENSODEG00000002494	CHD1L	97	59.909	Octodon_degus
ENSMZEG00005020830	chd1l	99	97.660	ENSONIG00000003183	chd1l	99	97.660	Oreochromis_niloticus
ENSMZEG00005020830	chd1l	77	62.887	ENSOANG00000003068	CHD1L	92	62.887	Ornithorhynchus_anatinus
ENSMZEG00005020830	chd1l	86	61.948	ENSOCUG00000009336	CHD1L	96	61.417	Oryctolagus_cuniculus
ENSMZEG00005020830	chd1l	87	79.446	ENSORLG00000003673	chd1l	95	79.215	Oryzias_latipes
ENSMZEG00005020830	chd1l	96	77.963	ENSORLG00020005123	chd1l	99	79.143	Oryzias_latipes_hni
ENSMZEG00005020830	chd1l	96	77.685	ENSORLG00015001680	chd1l	99	78.271	Oryzias_latipes_hsok
ENSMZEG00005020830	chd1l	75	77.922	ENSOMEG00000006109	chd1l	88	77.922	Oryzias_melastigma
ENSMZEG00005020830	chd1l	88	63.771	ENSOGAG00000008775	CHD1L	97	63.543	Otolemur_garnettii
ENSMZEG00005020830	chd1l	90	64.094	ENSOARG00000020547	CHD1L	99	65.162	Ovis_aries
ENSMZEG00005020830	chd1l	85	63.925	ENSPPAG00000039193	CHD1L	99	64.010	Pan_paniscus
ENSMZEG00005020830	chd1l	86	64.808	ENSPPRG00000010258	CHD1L	97	63.946	Panthera_pardus
ENSMZEG00005020830	chd1l	86	64.527	ENSPTRG00000001220	CHD1L	96	63.761	Pan_troglodytes
ENSMZEG00005020830	chd1l	86	64.720	ENSPANG00000009170	CHD1L	97	63.968	Papio_anubis
ENSMZEG00005020830	chd1l	95	70.551	ENSPKIG00000022166	chd1l	97	71.860	Paramormyrops_kingsleyae
ENSMZEG00005020830	chd1l	86	65.228	ENSPSIG00000012595	CHD1L	96	64.498	Pelodiscus_sinensis
ENSMZEG00005020830	chd1l	86	63.668	ENSPEMG00000013528	Chd1l	98	62.698	Peromyscus_maniculatus_bairdii
ENSMZEG00005020830	chd1l	83	63.462	ENSPCIG00000030409	CHD1L	99	63.702	Phascolarctos_cinereus
ENSMZEG00005020830	chd1l	95	80.544	ENSPFOG00000015948	chd1l	94	80.753	Poecilia_formosa
ENSMZEG00005020830	chd1l	95	81.230	ENSPLAG00000015145	chd1l	98	81.356	Poecilia_latipinna
ENSMZEG00005020830	chd1l	95	81.217	ENSPMEG00000008720	chd1l	99	81.532	Poecilia_mexicana
ENSMZEG00005020830	chd1l	87	80.549	ENSPREG00000017885	chd1l	98	80.320	Poecilia_reticulata
ENSMZEG00005020830	chd1l	87	63.918	ENSPPYG00000000946	CHD1L	98	63.360	Pongo_abelii
ENSMZEG00005020830	chd1l	82	58.211	ENSPCAG00000005959	CHD1L	91	58.293	Procavia_capensis
ENSMZEG00005020830	chd1l	85	60.895	ENSPVAG00000006084	CHD1L	99	60.895	Pteropus_vampyrus
ENSMZEG00005020830	chd1l	87	97.359	ENSPNYG00000013001	chd1l	97	97.359	Pundamilia_nyererei
ENSMZEG00005020830	chd1l	95	69.493	ENSPNAG00000011881	chd1l	94	70.217	Pygocentrus_nattereri
ENSMZEG00005020830	chd1l	88	64.399	ENSRNOG00000017669	Chd1l	98	64.399	Rattus_norvegicus
ENSMZEG00005020830	chd1l	86	63.499	ENSRBIG00000041272	CHD1L	97	62.984	Rhinopithecus_bieti
ENSMZEG00005020830	chd1l	86	63.520	ENSRROG00000041354	CHD1L	96	63.520	Rhinopithecus_roxellana
ENSMZEG00005020830	chd1l	88	62.557	ENSSHAG00000017395	CHD1L	99	62.247	Sarcophilus_harrisii
ENSMZEG00005020830	chd1l	95	70.359	ENSSFOG00015003649	chd1l	98	71.264	Scleropages_formosus
ENSMZEG00005020830	chd1l	95	81.224	ENSSMAG00000019377	chd1l	96	81.766	Scophthalmus_maximus
ENSMZEG00005020830	chd1l	85	84.080	ENSSDUG00000019831	chd1l	95	84.080	Seriola_dumerili
ENSMZEG00005020830	chd1l	85	83.882	ENSSLDG00000012714	chd1l	95	83.882	Seriola_lalandi_dorsalis
ENSMZEG00005020830	chd1l	87	62.385	ENSSPUG00000016865	CHD1L	98	62.615	Sphenodon_punctatus
ENSMZEG00005020830	chd1l	95	86.540	ENSSPAG00000017653	chd1l	100	87.066	Stegastes_partitus
ENSMZEG00005020830	chd1l	87	63.048	ENSSSCG00000006701	CHD1L	98	62.543	Sus_scrofa
ENSMZEG00005020830	chd1l	86	63.636	ENSTGUG00000013392	-	100	62.942	Taeniopygia_guttata
ENSMZEG00005020830	chd1l	85	70.106	ENSTNIG00000004902	chd1l	99	69.871	Tetraodon_nigroviridis
ENSMZEG00005020830	chd1l	86	61.916	ENSTTRG00000011711	CHD1L	99	61.799	Tursiops_truncatus
ENSMZEG00005020830	chd1l	88	64.692	ENSUAMG00000021991	CHD1L	97	64.465	Ursus_americanus
ENSMZEG00005020830	chd1l	88	64.586	ENSUMAG00000009733	CHD1L	96	65.554	Ursus_maritimus
ENSMZEG00005020830	chd1l	88	64.082	ENSVVUG00000007316	CHD1L	93	63.740	Vulpes_vulpes
ENSMZEG00005020830	chd1l	94	77.077	ENSXCOG00000008336	chd1l	93	77.287	Xiphophorus_couchianus
ENSMZEG00005020830	chd1l	95	81.408	ENSXMAG00000015898	chd1l	94	81.618	Xiphophorus_maculatus