EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005020959 (Gene tree)
Gene ID: 101468812
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 6458 bases
Position: chrLG23:9606609-9613066
Accession: 101468812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028089	TRM13	PF05206.14	8.5e-82	1	1
ENSMZEP00005028089	zf-U11-48K	PF05253.12	2.3e-09	1	1
ENSMZEP00005028089	zf-TRM13_CCCH	PF11722.8	6.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005028984	-	2347	XM_004557027	ENSMZEP00005028089	445 (aa)	XP_004557084	UPI000329B151

Gene Model

Click here to download ENSMZEG00005020959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005020959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005020959	trmt13	99	53.178	ENSG00000122435	TRMT13	96	53.178	Homo_sapiens
ENSMZEG00005020959	trmt13	99	73.251	ENSAPOG00000015131	trmt13	99	73.868	Acanthochromis_polyacanthus
ENSMZEG00005020959	trmt13	99	53.488	ENSAMEG00000008917	TRMT13	96	53.488	Ailuropoda_melanoleuca
ENSMZEG00005020959	trmt13	99	82.135	ENSACIG00000005804	trmt13	97	78.355	Amphilophus_citrinellus
ENSMZEG00005020959	trmt13	99	73.251	ENSAOCG00000023585	trmt13	99	73.251	Amphiprion_ocellaris
ENSMZEG00005020959	trmt13	99	73.868	ENSAPEG00000004025	trmt13	99	73.868	Amphiprion_percula
ENSMZEG00005020959	trmt13	99	73.593	ENSATEG00000006597	trmt13	97	73.593	Anabas_testudineus
ENSMZEG00005020959	trmt13	89	55.952	ENSAPLG00000014924	TRMT13	98	55.952	Anas_platyrhynchos
ENSMZEG00005020959	trmt13	98	54.428	ENSACAG00000003498	TRMT13	97	54.428	Anolis_carolinensis
ENSMZEG00005020959	trmt13	99	53.178	ENSANAG00000019525	TRMT13	96	53.178	Aotus_nancymaae
ENSMZEG00005020959	trmt13	100	99.775	ENSACLG00000020018	trmt13	100	99.775	Astatotilapia_calliptera
ENSMZEG00005020959	trmt13	99	54.565	ENSAMXG00000017963	trmt13	98	55.626	Astyanax_mexicanus
ENSMZEG00005020959	trmt13	99	53.390	ENSBTAG00000015781	TRMT13	96	53.390	Bos_taurus
ENSMZEG00005020959	trmt13	99	52.754	ENSCJAG00000000200	TRMT13	88	64.706	Callithrix_jacchus
ENSMZEG00005020959	trmt13	65	50.311	ENSCAFG00000020021	TRMT13	99	50.311	Canis_familiaris
ENSMZEG00005020959	trmt13	59	59.623	ENSCAFG00020011572	TRMT13	90	59.623	Canis_lupus_dingo
ENSMZEG00005020959	trmt13	99	53.586	ENSCHIG00000015395	TRMT13	96	53.586	Capra_hircus
ENSMZEG00005020959	trmt13	98	52.878	ENSTSYG00000010811	TRMT13	97	53.945	Carlito_syrichta
ENSMZEG00005020959	trmt13	75	40.000	ENSCAPG00000009085	TRMT13	96	42.817	Cavia_aperea
ENSMZEG00005020959	trmt13	100	52.754	ENSCPOG00000000694	TRMT13	97	52.754	Cavia_porcellus
ENSMZEG00005020959	trmt13	99	52.542	ENSCCAG00000023772	TRMT13	96	52.542	Cebus_capucinus
ENSMZEG00005020959	trmt13	99	53.390	ENSCATG00000033556	TRMT13	96	53.390	Cercocebus_atys
ENSMZEG00005020959	trmt13	90	53.396	ENSCLAG00000008220	TRMT13	99	53.846	Chinchilla_lanigera
ENSMZEG00005020959	trmt13	99	53.390	ENSCSAG00000001506	TRMT13	96	53.390	Chlorocebus_sabaeus
ENSMZEG00005020959	trmt13	99	54.043	ENSCPBG00000026671	TRMT13	96	54.043	Chrysemys_picta_bellii
ENSMZEG00005020959	trmt13	99	53.178	ENSCANG00000034659	TRMT13	96	53.178	Colobus_angolensis_palliatus
ENSMZEG00005020959	trmt13	98	53.333	ENSCGRG00001021601	Trmt13	95	53.333	Cricetulus_griseus_chok1gshd
ENSMZEG00005020959	trmt13	50	50.000	ENSCGRG00000000093	-	96	50.000	Cricetulus_griseus_crigri
ENSMZEG00005020959	trmt13	99	69.977	ENSCSEG00000000591	trmt13	98	69.977	Cynoglossus_semilaevis
ENSMZEG00005020959	trmt13	99	69.612	ENSCVAG00000017342	trmt13	94	69.612	Cyprinodon_variegatus
ENSMZEG00005020959	trmt13	99	57.363	ENSDARG00000102846	trmt13	97	57.363	Danio_rerio
ENSMZEG00005020959	trmt13	59	59.480	ENSDNOG00000001710	TRMT13	80	59.480	Dasypus_novemcinctus
ENSMZEG00005020959	trmt13	99	52.331	ENSDORG00000015808	Trmt13	96	52.331	Dipodomys_ordii
ENSMZEG00005020959	trmt13	99	35.088	FBgn0037435	CG18048	95	35.088	Drosophila_melanogaster
ENSMZEG00005020959	trmt13	98	45.957	ENSETEG00000005819	TRMT13	96	45.957	Echinops_telfairi
ENSMZEG00005020959	trmt13	97	44.201	ENSEBUG00000014444	trmt13	96	44.201	Eptatretus_burgeri
ENSMZEG00005020959	trmt13	99	53.178	ENSEASG00005015918	TRMT13	96	53.178	Equus_asinus_asinus
ENSMZEG00005020959	trmt13	99	52.966	ENSECAG00000022626	TRMT13	96	52.966	Equus_caballus
ENSMZEG00005020959	trmt13	78	56.667	ENSEEUG00000000294	TRMT13	73	56.667	Erinaceus_europaeus
ENSMZEG00005020959	trmt13	99	57.388	ENSELUG00000003803	trmt13	98	58.030	Esox_lucius
ENSMZEG00005020959	trmt13	99	52.542	ENSFCAG00000030618	TRMT13	98	52.817	Felis_catus
ENSMZEG00005020959	trmt13	98	55.799	ENSFALG00000002424	TRMT13	95	55.799	Ficedula_albicollis
ENSMZEG00005020959	trmt13	99	52.754	ENSFDAG00000006342	TRMT13	96	52.754	Fukomys_damarensis
ENSMZEG00005020959	trmt13	82	72.178	ENSFHEG00000022954	trmt13	100	71.883	Fundulus_heteroclitus
ENSMZEG00005020959	trmt13	97	57.407	ENSGMOG00000013223	trmt13	99	57.471	Gadus_morhua
ENSMZEG00005020959	trmt13	98	55.217	ENSGALG00000005290	TRMT13	96	55.315	Gallus_gallus
ENSMZEG00005020959	trmt13	83	69.169	ENSGAFG00000001577	trmt13	83	69.169	Gambusia_affinis
ENSMZEG00005020959	trmt13	99	74.610	ENSGACG00000013428	trmt13	98	75.724	Gasterosteus_aculeatus
ENSMZEG00005020959	trmt13	99	53.503	ENSGAGG00000023303	TRMT13	96	60.517	Gopherus_agassizii
ENSMZEG00005020959	trmt13	99	52.966	ENSGGOG00000005616	TRMT13	96	52.966	Gorilla_gorilla
ENSMZEG00005020959	trmt13	100	98.884	ENSHBUG00000007754	trmt13	100	98.884	Haplochromis_burtoni
ENSMZEG00005020959	trmt13	99	52.979	ENSHGLG00000002164	TRMT13	96	52.979	Heterocephalus_glaber_female
ENSMZEG00005020959	trmt13	99	52.979	ENSHGLG00100001618	TRMT13	96	52.979	Heterocephalus_glaber_male
ENSMZEG00005020959	trmt13	99	56.473	ENSHCOG00000020553	trmt13	99	56.473	Hippocampus_comes
ENSMZEG00005020959	trmt13	99	56.264	ENSIPUG00000024787	trmt13	98	57.802	Ictalurus_punctatus
ENSMZEG00005020959	trmt13	99	52.119	ENSSTOG00000013483	TRMT13	96	52.119	Ictidomys_tridecemlineatus
ENSMZEG00005020959	trmt13	99	52.119	ENSJJAG00000018012	Trmt13	97	52.119	Jaculus_jaculus
ENSMZEG00005020959	trmt13	65	70.033	ENSKMAG00000007639	trmt13	93	70.946	Kryptolebias_marmoratus
ENSMZEG00005020959	trmt13	99	72.629	ENSLBEG00000020238	trmt13	99	72.629	Labrus_bergylta
ENSMZEG00005020959	trmt13	98	55.411	ENSLACG00000013153	TRMT13	99	54.774	Latimeria_chalumnae
ENSMZEG00005020959	trmt13	99	55.628	ENSLOCG00000000418	trmt13	98	55.628	Lepisosteus_oculatus
ENSMZEG00005020959	trmt13	77	53.100	ENSLAFG00000002383	TRMT13	98	53.100	Loxodonta_africana
ENSMZEG00005020959	trmt13	99	52.966	ENSMFAG00000034681	TRMT13	96	52.966	Macaca_fascicularis
ENSMZEG00005020959	trmt13	99	52.966	ENSMMUG00000004243	TRMT13	96	52.966	Macaca_mulatta
ENSMZEG00005020959	trmt13	99	52.966	ENSMNEG00000036102	TRMT13	96	52.966	Macaca_nemestrina
ENSMZEG00005020959	trmt13	99	53.178	ENSMLEG00000034258	TRMT13	96	53.178	Mandrillus_leucophaeus
ENSMZEG00005020959	trmt13	98	76.053	ENSMAMG00000016597	trmt13	96	76.053	Mastacembelus_armatus
ENSMZEG00005020959	trmt13	89	55.952	ENSMGAG00000006970	TRMT13	98	55.952	Meleagris_gallopavo
ENSMZEG00005020959	trmt13	98	53.079	ENSMAUG00000010448	Trmt13	95	53.079	Mesocricetus_auratus
ENSMZEG00005020959	trmt13	99	53.390	ENSMICG00000005283	TRMT13	96	53.390	Microcebus_murinus
ENSMZEG00005020959	trmt13	99	53.797	ENSMOCG00000019914	Trmt13	97	53.797	Microtus_ochrogaster
ENSMZEG00005020959	trmt13	60	65.543	ENSMMOG00000007762	trmt13	90	65.543	Mola_mola
ENSMZEG00005020959	trmt13	100	51.983	ENSMODG00000003646	TRMT13	98	51.983	Monodelphis_domestica
ENSMZEG00005020959	trmt13	100	71.681	ENSMALG00000020965	trmt13	98	71.681	Monopterus_albus
ENSMZEG00005020959	trmt13	99	53.079	MGP_CAROLIEiJ_G0025568	Trmt13	98	56.593	Mus_caroli
ENSMZEG00005020959	trmt13	99	52.866	ENSMUSG00000033439	Trmt13	98	56.593	Mus_musculus
ENSMZEG00005020959	trmt13	99	53.079	MGP_PahariEiJ_G0027014	Trmt13	93	58.140	Mus_pahari
ENSMZEG00005020959	trmt13	99	53.433	MGP_SPRETEiJ_G0026518	Trmt13	98	56.593	Mus_spretus
ENSMZEG00005020959	trmt13	78	53.279	ENSMPUG00000002078	-	96	53.279	Mustela_putorius_furo
ENSMZEG00005020959	trmt13	98	54.409	ENSMLUG00000002124	TRMT13	95	54.409	Myotis_lucifugus
ENSMZEG00005020959	trmt13	100	91.295	ENSNBRG00000006783	trmt13	98	91.295	Neolamprologus_brichardi
ENSMZEG00005020959	trmt13	99	52.754	ENSNLEG00000035917	TRMT13	96	52.754	Nomascus_leucogenys
ENSMZEG00005020959	trmt13	53	50.833	ENSMEUG00000013346	-	94	50.833	Notamacropus_eugenii
ENSMZEG00005020959	trmt13	59	59.245	ENSOPRG00000012048	TRMT13	54	59.245	Ochotona_princeps
ENSMZEG00005020959	trmt13	100	96.429	ENSONIG00000004574	trmt13	100	96.429	Oreochromis_niloticus
ENSMZEG00005020959	trmt13	90	53.935	ENSOANG00000012057	TRMT13	97	53.935	Ornithorhynchus_anatinus
ENSMZEG00005020959	trmt13	99	52.878	ENSOCUG00000023095	TRMT13	96	52.878	Oryctolagus_cuniculus
ENSMZEG00005020959	trmt13	99	63.557	ENSORLG00000003320	trmt13	99	64.642	Oryzias_latipes
ENSMZEG00005020959	trmt13	98	66.222	ENSORLG00020005972	trmt13	97	66.222	Oryzias_latipes_hni
ENSMZEG00005020959	trmt13	99	70.678	ENSORLG00015002270	trmt13	99	70.678	Oryzias_latipes_hsok
ENSMZEG00005020959	trmt13	99	71.523	ENSOMEG00000006724	trmt13	94	72.406	Oryzias_melastigma
ENSMZEG00005020959	trmt13	98	53.205	ENSOGAG00000005618	TRMT13	93	53.205	Otolemur_garnettii
ENSMZEG00005020959	trmt13	99	53.586	ENSOARG00000017983	TRMT13	96	53.586	Ovis_aries
ENSMZEG00005020959	trmt13	99	53.390	ENSPPAG00000043736	TRMT13	96	53.390	Pan_paniscus
ENSMZEG00005020959	trmt13	99	52.542	ENSPPRG00000003424	TRMT13	98	52.817	Panthera_pardus
ENSMZEG00005020959	trmt13	99	52.542	ENSPTIG00000018598	TRMT13	98	52.817	Panthera_tigris_altaica
ENSMZEG00005020959	trmt13	98	53.219	ENSPTRG00000001001	TRMT13	95	53.219	Pan_troglodytes
ENSMZEG00005020959	trmt13	99	53.178	ENSPANG00000007598	TRMT13	96	53.178	Papio_anubis
ENSMZEG00005020959	trmt13	99	56.579	ENSPKIG00000001514	trmt13	99	56.579	Paramormyrops_kingsleyae
ENSMZEG00005020959	trmt13	89	54.028	ENSPSIG00000012703	TRMT13	99	54.028	Pelodiscus_sinensis
ENSMZEG00005020959	trmt13	99	62.168	ENSPMGG00000013298	trmt13	94	62.168	Periophthalmus_magnuspinnatus
ENSMZEG00005020959	trmt13	99	52.818	ENSPEMG00000000275	Trmt13	98	52.818	Peromyscus_maniculatus_bairdii
ENSMZEG00005020959	trmt13	98	47.490	ENSPMAG00000000823	trmt13	98	47.490	Petromyzon_marinus
ENSMZEG00005020959	trmt13	98	53.830	ENSPCIG00000007699	TRMT13	97	53.830	Phascolarctos_cinereus
ENSMZEG00005020959	trmt13	97	67.494	ENSPFOG00000008675	trmt13	94	67.494	Poecilia_formosa
ENSMZEG00005020959	trmt13	99	67.621	ENSPLAG00000009709	trmt13	99	67.621	Poecilia_latipinna
ENSMZEG00005020959	trmt13	98	67.550	ENSPMEG00000022954	trmt13	99	67.550	Poecilia_mexicana
ENSMZEG00005020959	trmt13	86	69.330	ENSPREG00000005645	trmt13	95	66.202	Poecilia_reticulata
ENSMZEG00005020959	trmt13	98	53.205	ENSPPYG00000001120	TRMT13	95	53.205	Pongo_abelii
ENSMZEG00005020959	trmt13	99	52.442	ENSPCAG00000002340	TRMT13	96	52.442	Procavia_capensis
ENSMZEG00005020959	trmt13	99	52.754	ENSPCOG00000017984	TRMT13	96	52.754	Propithecus_coquereli
ENSMZEG00005020959	trmt13	99	52.754	ENSPVAG00000017430	TRMT13	96	52.754	Pteropus_vampyrus
ENSMZEG00005020959	trmt13	100	94.196	ENSPNYG00000013690	trmt13	100	94.196	Pundamilia_nyererei
ENSMZEG00005020959	trmt13	99	54.545	ENSPNAG00000022130	trmt13	98	54.545	Pygocentrus_nattereri
ENSMZEG00005020959	trmt13	98	53.564	ENSRNOG00000015140	Trmt13	92	53.564	Rattus_norvegicus
ENSMZEG00005020959	trmt13	99	53.178	ENSRBIG00000037686	TRMT13	96	53.178	Rhinopithecus_bieti
ENSMZEG00005020959	trmt13	99	53.178	ENSRROG00000044057	TRMT13	96	53.178	Rhinopithecus_roxellana
ENSMZEG00005020959	trmt13	99	53.178	ENSSBOG00000026541	TRMT13	96	53.178	Saimiri_boliviensis_boliviensis
ENSMZEG00005020959	trmt13	92	53.167	ENSSHAG00000005213	TRMT13	97	53.167	Sarcophilus_harrisii
ENSMZEG00005020959	trmt13	99	57.050	ENSSFOG00015017560	trmt13	98	57.484	Scleropages_formosus
ENSMZEG00005020959	trmt13	99	70.588	ENSSMAG00000014592	trmt13	96	70.588	Scophthalmus_maximus
ENSMZEG00005020959	trmt13	99	74.353	ENSSDUG00000015508	trmt13	97	73.830	Seriola_dumerili
ENSMZEG00005020959	trmt13	100	74.255	ENSSLDG00000019060	trmt13	97	74.255	Seriola_lalandi_dorsalis
ENSMZEG00005020959	trmt13	100	48.017	ENSSARG00000010344	TRMT13	99	48.017	Sorex_araneus
ENSMZEG00005020959	trmt13	98	51.931	ENSSPUG00000016339	TRMT13	99	51.931	Sphenodon_punctatus
ENSMZEG00005020959	trmt13	99	77.974	ENSSPAG00000011922	trmt13	99	77.391	Stegastes_partitus
ENSMZEG00005020959	trmt13	99	53.488	ENSSSCG00000006869	TRMT13	96	53.488	Sus_scrofa
ENSMZEG00005020959	trmt13	99	55.531	ENSTGUG00000005253	TRMT13	98	55.531	Taeniopygia_guttata
ENSMZEG00005020959	trmt13	98	68.271	ENSTRUG00000008400	trmt13	97	68.271	Takifugu_rubripes
ENSMZEG00005020959	trmt13	88	41.966	ENSTBEG00000008911	TRMT13	99	41.966	Tupaia_belangeri
ENSMZEG00005020959	trmt13	98	51.502	ENSUAMG00000017251	TRMT13	95	51.502	Ursus_americanus
ENSMZEG00005020959	trmt13	98	53.747	ENSUMAG00000007901	TRMT13	99	54.091	Ursus_maritimus
ENSMZEG00005020959	trmt13	89	41.355	ENSVPAG00000001034	TRMT13	97	41.355	Vicugna_pacos
ENSMZEG00005020959	trmt13	99	52.842	ENSVVUG00000021996	TRMT13	97	52.842	Vulpes_vulpes
ENSMZEG00005020959	trmt13	99	51.429	ENSXETG00000013204	trmt13	97	51.429	Xenopus_tropicalis
ENSMZEG00005020959	trmt13	99	66.960	ENSXMAG00000010765	trmt13	99	66.960	Xiphophorus_maculatus