EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021090 (Gene tree)
Gene ID: 101465912
Gene Symbol: -
Alias: RAB5CL|RABL
Full Name: ras-related protein Rab-5C
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 9028 bases
Position: chrAGTA05000068.1:97843-106870
Accession: 101465912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028287	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005029186	-	2540	XM_004567462	ENSMZEP00005028287	222 (aa)	XP_004567519	UPI00032A020F

Gene Model

Click here to download ENSMZEG00005021090's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04144	Endocytosis	KEGG
mze04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021090	-	99	88.584	ENSG00000108774	RAB5C	95	95.763	Homo_sapiens
ENSMZEG00005021090	-	99	89.140	ENSAPOG00000016864	rab5c	95	90.521	Acanthochromis_polyacanthus
ENSMZEG00005021090	-	99	88.584	ENSAMEG00000006003	RAB5C	96	89.100	Ailuropoda_melanoleuca
ENSMZEG00005021090	-	100	87.838	ENSACIG00000010896	rab5c	98	88.732	Amphilophus_citrinellus
ENSMZEG00005021090	-	99	89.140	ENSAOCG00000016614	rab5c	95	90.521	Amphiprion_ocellaris
ENSMZEG00005021090	-	96	89.720	ENSAPEG00000017868	-	96	90.521	Amphiprion_percula
ENSMZEG00005021090	-	99	89.091	ENSATEG00000001937	rab5c	96	90.476	Anabas_testudineus
ENSMZEG00005021090	-	93	90.821	ENSANAG00000025390	RAB5C	97	91.457	Aotus_nancymaae
ENSMZEG00005021090	-	100	86.937	ENSACLG00000002706	rab5c	96	88.208	Astatotilapia_calliptera
ENSMZEG00005021090	-	100	100.000	ENSACLG00000008615	-	100	100.000	Astatotilapia_calliptera
ENSMZEG00005021090	-	100	88.789	ENSAMXG00000043717	rab5c	96	90.141	Astyanax_mexicanus
ENSMZEG00005021090	-	95	89.100	ENSAMXG00000037267	-	99	89.100	Astyanax_mexicanus
ENSMZEG00005021090	-	99	88.584	ENSBTAG00000006982	RAB5C	96	89.100	Bos_taurus
ENSMZEG00005021090	-	99	74.439	WBGene00004268	rab-5	95	75.587	Caenorhabditis_elegans
ENSMZEG00005021090	-	99	88.128	ENSCAFG00000015629	RAB5C	96	88.626	Canis_familiaris
ENSMZEG00005021090	-	99	88.128	ENSCAFG00020013537	RAB5C	96	88.626	Canis_lupus_dingo
ENSMZEG00005021090	-	99	88.584	ENSCHIG00000012960	RAB5C	96	89.100	Capra_hircus
ENSMZEG00005021090	-	99	89.041	ENSTSYG00000030531	RAB5C	96	89.573	Carlito_syrichta
ENSMZEG00005021090	-	99	88.584	ENSCCAG00000025940	RAB5C	96	89.100	Cebus_capucinus
ENSMZEG00005021090	-	99	88.584	ENSCATG00000040873	RAB5C	96	89.100	Cercocebus_atys
ENSMZEG00005021090	-	99	87.215	ENSCLAG00000016650	RAB5C	95	88.517	Chinchilla_lanigera
ENSMZEG00005021090	-	81	94.444	ENSCHOG00000009886	RAB5C	97	95.930	Choloepus_hoffmanni
ENSMZEG00005021090	-	97	75.814	ENSCING00000003340	-	97	75.701	Ciona_intestinalis
ENSMZEG00005021090	-	95	76.037	ENSCSAVG00000000613	-	94	84.416	Ciona_savignyi
ENSMZEG00005021090	-	99	88.584	ENSCGRG00001014226	Rab5c	96	89.100	Cricetulus_griseus_chok1gshd
ENSMZEG00005021090	-	99	88.584	ENSCGRG00000007534	Rab5c	96	89.100	Cricetulus_griseus_crigri
ENSMZEG00005021090	-	100	88.288	ENSCSEG00000017024	rab5c	96	89.623	Cynoglossus_semilaevis
ENSMZEG00005021090	-	100	89.640	ENSCVAG00000009550	rab5c	96	91.038	Cyprinodon_variegatus
ENSMZEG00005021090	-	99	89.041	ENSDNOG00000038853	RAB5C	96	89.573	Dasypus_novemcinctus
ENSMZEG00005021090	-	99	89.041	ENSDORG00000006819	Rab5c	95	90.431	Dipodomys_ordii
ENSMZEG00005021090	-	97	72.146	FBgn0014010	Rab5	93	72.558	Drosophila_melanogaster
ENSMZEG00005021090	-	96	76.995	ENSEBUG00000014794	rab5c	96	77.512	Eptatretus_burgeri
ENSMZEG00005021090	-	99	88.584	ENSEASG00005009281	RAB5C	96	89.100	Equus_asinus_asinus
ENSMZEG00005021090	-	99	89.041	ENSECAG00000025054	RAB5C	96	89.573	Equus_caballus
ENSMZEG00005021090	-	99	88.584	ENSEEUG00000002790	RAB5C	96	89.100	Erinaceus_europaeus
ENSMZEG00005021090	-	99	88.128	ENSELUG00000018516	rab5c	96	89.474	Esox_lucius
ENSMZEG00005021090	-	100	86.036	ENSELUG00000010439	-	96	87.264	Esox_lucius
ENSMZEG00005021090	-	99	88.584	ENSFCAG00000002148	RAB5C	96	89.100	Felis_catus
ENSMZEG00005021090	-	99	86.758	ENSFDAG00000021541	RAB5C	96	87.204	Fukomys_damarensis
ENSMZEG00005021090	-	100	89.189	ENSFHEG00000012117	rab5c	96	90.566	Fundulus_heteroclitus
ENSMZEG00005021090	-	100	92.342	ENSFHEG00000015268	-	97	92.523	Fundulus_heteroclitus
ENSMZEG00005021090	-	76	87.574	ENSGMOG00000001876	-	98	87.574	Gadus_morhua
ENSMZEG00005021090	-	100	87.838	ENSGMOG00000015096	rab5c	96	89.151	Gadus_morhua
ENSMZEG00005021090	-	95	94.286	ENSGAFG00000003642	-	97	91.204	Gambusia_affinis
ENSMZEG00005021090	-	100	88.288	ENSGAFG00000000884	rab5c	96	89.623	Gambusia_affinis
ENSMZEG00005021090	-	99	85.455	ENSGACG00000008659	rab5c	95	86.667	Gasterosteus_aculeatus
ENSMZEG00005021090	-	99	88.584	ENSGGOG00000005472	RAB5C	96	89.100	Gorilla_gorilla
ENSMZEG00005021090	-	100	100.000	ENSHBUG00000006823	-	100	100.000	Haplochromis_burtoni
ENSMZEG00005021090	-	100	86.937	ENSHBUG00000002014	rab5c	96	88.208	Haplochromis_burtoni
ENSMZEG00005021090	-	99	87.671	ENSHGLG00000012067	RAB5C	96	88.152	Heterocephalus_glaber_female
ENSMZEG00005021090	-	99	85.455	ENSHCOG00000020238	-	99	84.545	Hippocampus_comes
ENSMZEG00005021090	-	100	89.686	ENSHCOG00000004662	rab5c	95	91.080	Hippocampus_comes
ENSMZEG00005021090	-	96	85.981	ENSIPUG00000020082	rab5c	99	85.981	Ictalurus_punctatus
ENSMZEG00005021090	-	99	88.584	ENSSTOG00000006620	RAB5C	96	89.100	Ictidomys_tridecemlineatus
ENSMZEG00005021090	-	99	89.498	ENSJJAG00000021181	Rab5c	96	90.047	Jaculus_jaculus
ENSMZEG00005021090	-	100	88.288	ENSKMAG00000020038	rab5c	96	89.623	Kryptolebias_marmoratus
ENSMZEG00005021090	-	100	92.342	ENSKMAG00000017417	-	96	92.958	Kryptolebias_marmoratus
ENSMZEG00005021090	-	100	88.739	ENSLBEG00000004128	rab5c	96	90.094	Labrus_bergylta
ENSMZEG00005021090	-	100	90.991	ENSLBEG00000010408	-	95	91.943	Labrus_bergylta
ENSMZEG00005021090	-	99	87.671	ENSLOCG00000012566	rab5c	96	88.995	Lepisosteus_oculatus
ENSMZEG00005021090	-	99	88.584	ENSMFAG00000039627	RAB5C	97	89.100	Macaca_fascicularis
ENSMZEG00005021090	-	99	88.584	ENSMNEG00000000355	RAB5C	96	89.100	Macaca_nemestrina
ENSMZEG00005021090	-	100	91.441	ENSMAMG00000016207	-	96	91.981	Mastacembelus_armatus
ENSMZEG00005021090	-	100	87.387	ENSMAMG00000022322	rab5c	96	89.623	Mastacembelus_armatus
ENSMZEG00005021090	-	100	86.937	ENSMZEG00005022735	rab5c	96	88.208	Maylandia_zebra
ENSMZEG00005021090	-	99	89.041	ENSMAUG00000015005	Rab5c	96	89.573	Mesocricetus_auratus
ENSMZEG00005021090	-	99	89.041	ENSMICG00000041608	RAB5C	96	89.573	Microcebus_murinus
ENSMZEG00005021090	-	99	88.584	ENSMOCG00000018531	-	96	89.100	Microtus_ochrogaster
ENSMZEG00005021090	-	99	89.091	ENSMMOG00000020621	rab5c	95	90.476	Mola_mola
ENSMZEG00005021090	-	100	90.541	ENSMALG00000022348	-	96	91.509	Monopterus_albus
ENSMZEG00005021090	-	97	82.326	ENSMALG00000006052	rab5c	96	83.019	Monopterus_albus
ENSMZEG00005021090	-	99	89.498	MGP_CAROLIEiJ_G0017184	Rab5c	96	90.047	Mus_caroli
ENSMZEG00005021090	-	99	89.498	ENSMUSG00000019173	Rab5c	96	90.047	Mus_musculus
ENSMZEG00005021090	-	99	89.498	MGP_PahariEiJ_G0018314	Rab5c	96	90.047	Mus_pahari
ENSMZEG00005021090	-	99	89.498	MGP_SPRETEiJ_G0018027	Rab5c	96	90.047	Mus_spretus
ENSMZEG00005021090	-	99	88.584	ENSMPUG00000010554	RAB5C	96	89.100	Mustela_putorius_furo
ENSMZEG00005021090	-	99	87.671	ENSNGAG00000010286	Rab5c	95	88.995	Nannospalax_galili
ENSMZEG00005021090	-	100	100.000	ENSNBRG00000016922	-	100	100.000	Neolamprologus_brichardi
ENSMZEG00005021090	-	100	87.838	ENSNBRG00000018165	rab5c	96	89.151	Neolamprologus_brichardi
ENSMZEG00005021090	-	81	87.778	ENSOPRG00000008255	RAB5C	97	88.372	Ochotona_princeps
ENSMZEG00005021090	-	99	86.758	ENSODEG00000017920	RAB5C	95	88.038	Octodon_degus
ENSMZEG00005021090	-	100	88.288	ENSONIG00000001113	rab5c	96	89.623	Oreochromis_niloticus
ENSMZEG00005021090	-	99	87.727	ENSORLG00000003882	rab5c	96	89.048	Oryzias_latipes
ENSMZEG00005021090	-	99	87.727	ENSORLG00020008388	rab5c	96	89.048	Oryzias_latipes_hni
ENSMZEG00005021090	-	99	87.727	ENSORLG00015021900	rab5c	96	89.048	Oryzias_latipes_hsok
ENSMZEG00005021090	-	99	87.727	ENSOMEG00000023078	rab5c	96	89.048	Oryzias_melastigma
ENSMZEG00005021090	-	99	88.584	ENSOGAG00000009456	RAB5C	95	89.952	Otolemur_garnettii
ENSMZEG00005021090	-	99	88.584	ENSOARG00000018768	RAB5C	96	89.100	Ovis_aries
ENSMZEG00005021090	-	99	88.584	ENSPPAG00000037206	RAB5C	96	89.100	Pan_paniscus
ENSMZEG00005021090	-	99	88.584	ENSPPRG00000005745	RAB5C	96	89.100	Panthera_pardus
ENSMZEG00005021090	-	99	88.584	ENSPTIG00000008177	RAB5C	96	89.100	Panthera_tigris_altaica
ENSMZEG00005021090	-	99	88.584	ENSPTRG00000009194	RAB5C	97	89.100	Pan_troglodytes
ENSMZEG00005021090	-	99	86.301	ENSPKIG00000001237	-	96	88.038	Paramormyrops_kingsleyae
ENSMZEG00005021090	-	99	84.475	ENSPKIG00000020112	-	96	86.124	Paramormyrops_kingsleyae
ENSMZEG00005021090	-	97	88.372	ENSPMGG00000010792	rab5c	98	89.151	Periophthalmus_magnuspinnatus
ENSMZEG00005021090	-	99	88.584	ENSPEMG00000017971	Rab5c	96	89.100	Peromyscus_maniculatus_bairdii
ENSMZEG00005021090	-	99	75.342	ENSPMAG00000007867	rab5c	97	76.303	Petromyzon_marinus
ENSMZEG00005021090	-	99	76.339	ENSPMAG00000000008	rab5c	96	78.037	Petromyzon_marinus
ENSMZEG00005021090	-	99	75.455	ENSPMAG00000001399	rab5c	97	76.777	Petromyzon_marinus
ENSMZEG00005021090	-	99	87.215	ENSPCIG00000020225	-	96	88.152	Phascolarctos_cinereus
ENSMZEG00005021090	-	100	88.288	ENSPLAG00000004790	rab5c	96	89.623	Poecilia_latipinna
ENSMZEG00005021090	-	99	92.760	ENSPLAG00000016333	-	97	92.958	Poecilia_latipinna
ENSMZEG00005021090	-	100	88.288	ENSPMEG00000011336	rab5c	96	89.623	Poecilia_mexicana
ENSMZEG00005021090	-	96	94.393	ENSPMEG00000012614	-	96	92.991	Poecilia_mexicana
ENSMZEG00005021090	-	86	94.737	ENSPREG00000022167	-	89	96.739	Poecilia_reticulata
ENSMZEG00005021090	-	100	88.288	ENSPREG00000010146	rab5c	96	89.623	Poecilia_reticulata
ENSMZEG00005021090	-	99	88.584	ENSPPYG00000008398	RAB5C	96	89.100	Pongo_abelii
ENSMZEG00005021090	-	99	88.584	ENSPCAG00000016412	RAB5C	96	89.100	Procavia_capensis
ENSMZEG00005021090	-	99	88.584	ENSPCOG00000026327	RAB5C	96	89.100	Propithecus_coquereli
ENSMZEG00005021090	-	99	89.041	ENSPVAG00000003867	RAB5C	96	89.573	Pteropus_vampyrus
ENSMZEG00005021090	-	100	86.937	ENSPNYG00000010615	rab5c	96	88.208	Pundamilia_nyererei
ENSMZEG00005021090	-	100	100.000	ENSPNYG00000015851	-	100	100.000	Pundamilia_nyererei
ENSMZEG00005021090	-	95	88.679	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSMZEG00005021090	-	100	88.341	ENSPNAG00000028138	rab5c	96	89.671	Pygocentrus_nattereri
ENSMZEG00005021090	-	99	89.041	ENSRNOG00000018568	Rab5c	96	89.573	Rattus_norvegicus
ENSMZEG00005021090	-	99	88.584	ENSRBIG00000031376	RAB5C	96	89.100	Rhinopithecus_bieti
ENSMZEG00005021090	-	99	88.584	ENSRROG00000032895	RAB5C	96	89.100	Rhinopithecus_roxellana
ENSMZEG00005021090	-	99	88.584	ENSSBOG00000032552	-	96	89.100	Saimiri_boliviensis_boliviensis
ENSMZEG00005021090	-	99	87.671	ENSSHAG00000005267	-	96	88.152	Sarcophilus_harrisii
ENSMZEG00005021090	-	100	81.982	ENSSFOG00015009988	-	96	83.019	Scleropages_formosus
ENSMZEG00005021090	-	95	89.100	ENSSMAG00000007323	rab5c	95	90.047	Scophthalmus_maximus
ENSMZEG00005021090	-	100	88.288	ENSSDUG00000023008	rab5c	96	89.623	Seriola_dumerili
ENSMZEG00005021090	-	100	87.387	ENSSLDG00000017771	rab5c	96	88.679	Seriola_lalandi_dorsalis
ENSMZEG00005021090	-	99	87.671	ENSSPUG00000012950	-	96	88.152	Sphenodon_punctatus
ENSMZEG00005021090	-	100	88.739	ENSSPAG00000006436	rab5c	96	90.094	Stegastes_partitus
ENSMZEG00005021090	-	99	88.584	ENSSSCG00000032467	RAB5C	96	89.100	Sus_scrofa
ENSMZEG00005021090	-	100	87.387	ENSTRUG00000015590	rab5c	96	88.679	Takifugu_rubripes
ENSMZEG00005021090	-	99	86.878	ENSTNIG00000011711	rab5c	95	89.100	Tetraodon_nigroviridis
ENSMZEG00005021090	-	99	88.584	ENSTBEG00000007092	RAB5C	96	89.100	Tupaia_belangeri
ENSMZEG00005021090	-	99	88.584	ENSTTRG00000006673	RAB5C	96	89.100	Tursiops_truncatus
ENSMZEG00005021090	-	99	88.584	ENSUAMG00000024343	RAB5C	96	89.100	Ursus_americanus
ENSMZEG00005021090	-	99	88.584	ENSUMAG00000023270	RAB5C	96	89.100	Ursus_maritimus
ENSMZEG00005021090	-	100	88.739	ENSXCOG00000016788	rab5c	99	90.094	Xiphophorus_couchianus
ENSMZEG00005021090	-	95	95.714	ENSXCOG00000006300	-	97	92.130	Xiphophorus_couchianus
ENSMZEG00005021090	-	100	88.288	ENSXMAG00000003266	rab5c	96	89.623	Xiphophorus_maculatus
ENSMZEG00005021090	-	99	93.607	ENSXMAG00000022179	-	97	92.130	Xiphophorus_maculatus