EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021214 (Gene tree)
Gene ID: 101477594
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 6674 bases
Position: chrLG3:19798418-19805091
Accession: 101477594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028452	zf-C2H2	PF00096.26	1.4e-18	1	2
ENSMZEP00005028452	zf-C2H2	PF00096.26	1.4e-18	2	2
ENSMZEP00005028456	zf-C2H2	PF00096.26	2.4e-16	1	1
ENSMZEP00005028452	zf-met	PF12874.7	8.4e-11	1	2
ENSMZEP00005028452	zf-met	PF12874.7	8.4e-11	2	2
ENSMZEP00005028456	zf-met	PF12874.7	2.7e-10	1	2
ENSMZEP00005028456	zf-met	PF12874.7	2.7e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005029360	-	3408	-	ENSMZEP00005028456	1135 (aa)	-	-
ENSMZET00005029356	-	4925	XM_004562752	ENSMZEP00005028452	1196 (aa)	XP_004562809	UPI0003297CCB

Gene Model

Click here to download ENSMZEG00005021214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021214	si:ch211-212k18.5	100	79.627	ENSAPOG00000013387	si:ch211-212k18.5	100	79.383	Acanthochromis_polyacanthus
ENSMZEG00005021214	si:ch211-212k18.5	76	54.098	ENSAPOG00000015347	sall2	71	72.222	Acanthochromis_polyacanthus
ENSMZEG00005021214	si:ch211-212k18.5	80	90.432	ENSACIG00000019922	si:ch211-212k18.5	99	90.422	Amphilophus_citrinellus
ENSMZEG00005021214	si:ch211-212k18.5	75	55.738	ENSAOCG00000016559	sall2	70	72.222	Amphiprion_ocellaris
ENSMZEG00005021214	si:ch211-212k18.5	100	76.561	ENSAOCG00000010737	si:ch211-212k18.5	100	77.534	Amphiprion_ocellaris
ENSMZEG00005021214	si:ch211-212k18.5	54	48.886	ENSAPEG00000020215	sall2	87	48.323	Amphiprion_percula
ENSMZEG00005021214	si:ch211-212k18.5	100	76.318	ENSAPEG00000006751	si:ch211-212k18.5	100	77.210	Amphiprion_percula
ENSMZEG00005021214	si:ch211-212k18.5	52	51.232	ENSATEG00000007303	sall2	63	72.222	Anabas_testudineus
ENSMZEG00005021214	si:ch211-212k18.5	81	81.705	ENSATEG00000001254	si:ch211-212k18.5	100	82.045	Anabas_testudineus
ENSMZEG00005021214	si:ch211-212k18.5	59	55.769	ENSACLG00000019867	sall2	69	46.863	Astatotilapia_calliptera
ENSMZEG00005021214	si:ch211-212k18.5	100	99.912	ENSACLG00000009709	si:ch211-212k18.5	100	99.912	Astatotilapia_calliptera
ENSMZEG00005021214	si:ch211-212k18.5	66	50.358	ENSAMXG00000020956	sall2	61	60.870	Astyanax_mexicanus
ENSMZEG00005021214	si:ch211-212k18.5	99	54.021	ENSAMXG00000010979	si:ch211-212k18.5	99	54.079	Astyanax_mexicanus
ENSMZEG00005021214	si:ch211-212k18.5	58	44.704	ENSCSEG00000021148	sall2	52	60.345	Cynoglossus_semilaevis
ENSMZEG00005021214	si:ch211-212k18.5	99	70.445	ENSCSEG00000004426	si:ch211-212k18.5	99	70.526	Cynoglossus_semilaevis
ENSMZEG00005021214	si:ch211-212k18.5	59	55.769	ENSCVAG00000006032	sall2	63	75.000	Cyprinodon_variegatus
ENSMZEG00005021214	si:ch211-212k18.5	99	71.593	ENSCVAG00000007475	si:ch211-212k18.5	99	71.440	Cyprinodon_variegatus
ENSMZEG00005021214	si:ch211-212k18.5	95	57.105	ENSDARG00000103316	si:ch211-212k18.5	94	56.426	Danio_rerio
ENSMZEG00005021214	si:ch211-212k18.5	77	46.605	ENSDARG00000075116	sall2	69	55.556	Danio_rerio
ENSMZEG00005021214	si:ch211-212k18.5	99	58.533	ENSELUG00000024534	si:ch211-212k18.5	99	58.400	Esox_lucius
ENSMZEG00005021214	si:ch211-212k18.5	85	49.308	ENSELUG00000004389	sall2	72	51.931	Esox_lucius
ENSMZEG00005021214	si:ch211-212k18.5	59	58.000	ENSFHEG00000017550	sall2	63	75.000	Fundulus_heteroclitus
ENSMZEG00005021214	si:ch211-212k18.5	99	72.467	ENSFHEG00000017264	si:ch211-212k18.5	99	72.847	Fundulus_heteroclitus
ENSMZEG00005021214	si:ch211-212k18.5	58	56.863	ENSGAFG00000015194	sall2	60	48.031	Gambusia_affinis
ENSMZEG00005021214	si:ch211-212k18.5	99	72.363	ENSGAFG00000003746	si:ch211-212k18.5	99	72.085	Gambusia_affinis
ENSMZEG00005021214	si:ch211-212k18.5	100	99.666	ENSHBUG00000019672	si:ch211-212k18.5	100	99.666	Haplochromis_burtoni
ENSMZEG00005021214	si:ch211-212k18.5	75	55.769	ENSHBUG00000002882	sall2	74	44.817	Haplochromis_burtoni
ENSMZEG00005021214	si:ch211-212k18.5	97	62.330	ENSHCOG00000002842	si:ch211-212k18.5	99	60.862	Hippocampus_comes
ENSMZEG00005021214	si:ch211-212k18.5	99	52.316	ENSIPUG00000002559	sall2	99	50.855	Ictalurus_punctatus
ENSMZEG00005021214	si:ch211-212k18.5	64	47.152	ENSKMAG00000020172	sall2	64	75.000	Kryptolebias_marmoratus
ENSMZEG00005021214	si:ch211-212k18.5	99	73.431	ENSKMAG00000019657	si:ch211-212k18.5	99	72.624	Kryptolebias_marmoratus
ENSMZEG00005021214	si:ch211-212k18.5	100	72.713	ENSLBEG00000020887	si:ch211-212k18.5	100	71.822	Labrus_bergylta
ENSMZEG00005021214	si:ch211-212k18.5	64	47.321	ENSMAMG00000016229	sall2	51	73.529	Mastacembelus_armatus
ENSMZEG00005021214	si:ch211-212k18.5	71	85.332	ENSMAMG00000015887	si:ch211-212k18.5	99	84.615	Mastacembelus_armatus
ENSMZEG00005021214	si:ch211-212k18.5	75	55.769	ENSMZEG00005012103	sall2	74	44.817	Maylandia_zebra
ENSMZEG00005021214	si:ch211-212k18.5	92	81.818	ENSMMOG00000012726	si:ch211-212k18.5	100	81.257	Mola_mola
ENSMZEG00005021214	si:ch211-212k18.5	92	77.071	ENSMALG00000000979	si:ch211-212k18.5	97	75.411	Monopterus_albus
ENSMZEG00005021214	si:ch211-212k18.5	70	46.420	ENSNBRG00000017645	sall2	76	46.412	Neolamprologus_brichardi
ENSMZEG00005021214	si:ch211-212k18.5	98	94.449	ENSNBRG00000023948	si:ch211-212k18.5	99	93.655	Neolamprologus_brichardi
ENSMZEG00005021214	si:ch211-212k18.5	99	71.050	ENSORLG00000030429	si:ch211-212k18.5	99	70.008	Oryzias_latipes
ENSMZEG00005021214	si:ch211-212k18.5	99	70.968	ENSORLG00020008145	si:ch211-212k18.5	99	70.223	Oryzias_latipes_hni
ENSMZEG00005021214	si:ch211-212k18.5	99	70.720	ENSORLG00015004982	si:ch211-212k18.5	99	69.925	Oryzias_latipes_hsok
ENSMZEG00005021214	si:ch211-212k18.5	100	69.633	ENSOMEG00000013949	si:ch211-212k18.5	100	67.799	Oryzias_melastigma
ENSMZEG00005021214	si:ch211-212k18.5	76	63.830	ENSPKIG00000009207	sall2	71	66.667	Paramormyrops_kingsleyae
ENSMZEG00005021214	si:ch211-212k18.5	94	67.668	ENSPMGG00000018714	si:ch211-212k18.5	99	65.669	Periophthalmus_magnuspinnatus
ENSMZEG00005021214	si:ch211-212k18.5	58	59.184	ENSPFOG00000016504	sall2	62	48.033	Poecilia_formosa
ENSMZEG00005021214	si:ch211-212k18.5	99	72.930	ENSPFOG00000023705	si:ch211-212k18.5	99	72.838	Poecilia_formosa
ENSMZEG00005021214	si:ch211-212k18.5	99	72.877	ENSPLAG00000002577	si:ch211-212k18.5	99	72.578	Poecilia_latipinna
ENSMZEG00005021214	si:ch211-212k18.5	58	59.184	ENSPLAG00000018320	sall2	60	47.979	Poecilia_latipinna
ENSMZEG00005021214	si:ch211-212k18.5	58	59.184	ENSPMEG00000006335	sall2	60	47.266	Poecilia_mexicana
ENSMZEG00005021214	si:ch211-212k18.5	99	72.607	ENSPMEG00000016395	si:ch211-212k18.5	99	72.751	Poecilia_mexicana
ENSMZEG00005021214	si:ch211-212k18.5	99	72.527	ENSPREG00000005292	si:ch211-212k18.5	99	72.660	Poecilia_reticulata
ENSMZEG00005021214	si:ch211-212k18.5	58	59.184	ENSPREG00000021908	sall2	60	48.100	Poecilia_reticulata
ENSMZEG00005021214	si:ch211-212k18.5	96	99.724	ENSPNYG00000021576	si:ch211-212k18.5	95	99.724	Pundamilia_nyererei
ENSMZEG00005021214	si:ch211-212k18.5	65	46.753	ENSPNAG00000021463	sall2	61	56.818	Pygocentrus_nattereri
ENSMZEG00005021214	si:ch211-212k18.5	99	54.844	ENSPNAG00000006123	si:ch211-212k18.5	99	54.140	Pygocentrus_nattereri
ENSMZEG00005021214	si:ch211-212k18.5	100	74.778	ENSSMAG00000006241	si:ch211-212k18.5	100	74.134	Scophthalmus_maximus
ENSMZEG00005021214	si:ch211-212k18.5	76	50.000	ENSSMAG00000014157	sall2	70	61.224	Scophthalmus_maximus
ENSMZEG00005021214	si:ch211-212k18.5	76	55.738	ENSSDUG00000012274	sall2	71	69.444	Seriola_dumerili
ENSMZEG00005021214	si:ch211-212k18.5	100	77.876	ENSSDUG00000006164	si:ch211-212k18.5	100	77.715	Seriola_dumerili
ENSMZEG00005021214	si:ch211-212k18.5	100	79.968	ENSSLDG00000003393	si:ch211-212k18.5	100	79.646	Seriola_lalandi_dorsalis
ENSMZEG00005021214	si:ch211-212k18.5	76	55.738	ENSSLDG00000001653	sall2	71	69.444	Seriola_lalandi_dorsalis
ENSMZEG00005021214	si:ch211-212k18.5	99	78.714	ENSSPAG00000013435	si:ch211-212k18.5	99	78.975	Stegastes_partitus
ENSMZEG00005021214	si:ch211-212k18.5	63	48.825	ENSSPAG00000023009	sall2	70	72.222	Stegastes_partitus
ENSMZEG00005021214	si:ch211-212k18.5	57	60.976	ENSTRUG00000024556	sall2	61	73.529	Takifugu_rubripes
ENSMZEG00005021214	si:ch211-212k18.5	90	77.086	ENSTRUG00000025082	si:ch211-212k18.5	95	73.977	Takifugu_rubripes
ENSMZEG00005021214	si:ch211-212k18.5	99	71.582	ENSXCOG00000000762	si:ch211-212k18.5	99	71.757	Xiphophorus_couchianus
ENSMZEG00005021214	si:ch211-212k18.5	99	73.383	ENSXMAG00000001461	si:ch211-212k18.5	99	73.235	Xiphophorus_maculatus
ENSMZEG00005021214	si:ch211-212k18.5	58	56.863	ENSXMAG00000000902	sall2	60	47.775	Xiphophorus_maculatus