EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021243 (Gene tree)
Gene ID: 101478240
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 41812 bases
Position: chrAGTA05000037.1:135243-177054
Accession: 101478240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028487	DZF	PF07528.14	3.2e-70	1	1
ENSMZEP00005028487	zf-met	PF12874.7	2.4e-21	1	3
ENSMZEP00005028487	zf-met	PF12874.7	2.4e-21	2	3
ENSMZEP00005028487	zf-met	PF12874.7	2.4e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005029391	-	3000	XM_004558642	ENSMZEP00005028487	999 (aa)	XP_004558699	-

Gene Model

Click here to download ENSMZEG00005021243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021243	zfr	100	75.000	ENSG00000056097	ZFR	94	84.656	Homo_sapiens
ENSMZEG00005021243	zfr	100	80.896	ENSAPOG00000009740	zfr	94	82.545	Acanthochromis_polyacanthus
ENSMZEG00005021243	zfr	100	74.590	ENSAMEG00000006184	ZFR	94	84.656	Ailuropoda_melanoleuca
ENSMZEG00005021243	zfr	100	97.500	ENSACIG00000015926	zfr	100	97.500	Amphilophus_citrinellus
ENSMZEG00005021243	zfr	100	85.748	ENSAOCG00000013876	zfr	94	87.651	Amphiprion_ocellaris
ENSMZEG00005021243	zfr	100	89.870	ENSAPEG00000024383	zfr	94	91.889	Amphiprion_percula
ENSMZEG00005021243	zfr	100	89.467	ENSATEG00000010271	zfr	94	91.859	Anabas_testudineus
ENSMZEG00005021243	zfr	65	67.325	ENSAPLG00000015627	-	92	85.417	Anas_platyrhynchos
ENSMZEG00005021243	zfr	100	68.169	ENSACAG00000007880	ZFR	94	86.486	Anolis_carolinensis
ENSMZEG00005021243	zfr	100	74.883	ENSANAG00000023333	ZFR	94	84.656	Aotus_nancymaae
ENSMZEG00005021243	zfr	100	100.000	ENSACLG00000016832	zfr	100	100.000	Astatotilapia_calliptera
ENSMZEG00005021243	zfr	98	86.826	ENSAMXG00000019511	zfr	94	86.826	Astyanax_mexicanus
ENSMZEG00005021243	zfr	100	70.626	ENSBTAG00000008414	ZFR	94	84.656	Bos_taurus
ENSMZEG00005021243	zfr	100	78.030	ENSCJAG00000018740	ZFR	94	84.656	Callithrix_jacchus
ENSMZEG00005021243	zfr	100	68.595	ENSCAFG00000018886	ZFR	93	84.656	Canis_familiaris
ENSMZEG00005021243	zfr	100	77.690	ENSCAFG00020016859	-	94	84.656	Canis_lupus_dingo
ENSMZEG00005021243	zfr	100	70.626	ENSCHIG00000007710	ZFR	94	84.656	Capra_hircus
ENSMZEG00005021243	zfr	97	69.867	ENSTSYG00000010670	ZFR	92	85.315	Carlito_syrichta
ENSMZEG00005021243	zfr	96	61.150	ENSCAPG00000015655	ZFR	100	58.948	Cavia_aperea
ENSMZEG00005021243	zfr	89	80.609	ENSCPOG00000000862	ZFR	93	85.315	Cavia_porcellus
ENSMZEG00005021243	zfr	100	70.680	ENSCCAG00000024473	ZFR	94	84.656	Cebus_capucinus
ENSMZEG00005021243	zfr	100	74.883	ENSCATG00000038311	ZFR	94	84.656	Cercocebus_atys
ENSMZEG00005021243	zfr	97	74.533	ENSCLAG00000007408	ZFR	94	85.315	Chinchilla_lanigera
ENSMZEG00005021243	zfr	100	74.883	ENSCSAG00000017180	ZFR	94	84.656	Chlorocebus_sabaeus
ENSMZEG00005021243	zfr	89	67.196	ENSCHOG00000003848	ZFR	88	74.825	Choloepus_hoffmanni
ENSMZEG00005021243	zfr	100	76.957	ENSCPBG00000024211	ZFR	94	86.957	Chrysemys_picta_bellii
ENSMZEG00005021243	zfr	100	74.766	ENSCANG00000017807	ZFR	94	84.656	Colobus_angolensis_palliatus
ENSMZEG00005021243	zfr	100	75.234	ENSCGRG00001016009	Zfr	94	84.656	Cricetulus_griseus_chok1gshd
ENSMZEG00005021243	zfr	98	75.234	ENSCGRG00000001228	Zfr	92	80.255	Cricetulus_griseus_crigri
ENSMZEG00005021243	zfr	99	86.081	ENSCSEG00000011169	ZFR	93	86.203	Cynoglossus_semilaevis
ENSMZEG00005021243	zfr	99	86.952	ENSCSEG00000009224	zfr	100	88.546	Cynoglossus_semilaevis
ENSMZEG00005021243	zfr	99	85.814	ENSCVAG00000016494	zfr	100	85.514	Cyprinodon_variegatus
ENSMZEG00005021243	zfr	100	88.360	ENSDARG00000027109	zfr	94	88.360	Danio_rerio
ENSMZEG00005021243	zfr	100	74.592	ENSDNOG00000008852	ZFR	94	84.656	Dasypus_novemcinctus
ENSMZEG00005021243	zfr	100	74.737	ENSDORG00000016643	Zfr	94	83.069	Dipodomys_ordii
ENSMZEG00005021243	zfr	100	74.026	ENSETEG00000008937	ZFR	94	84.865	Echinops_telfairi
ENSMZEG00005021243	zfr	51	61.850	ENSEBUG00000012503	-	90	60.886	Eptatretus_burgeri
ENSMZEG00005021243	zfr	100	74.590	ENSEASG00005007104	ZFR	94	84.127	Equus_asinus_asinus
ENSMZEG00005021243	zfr	80	73.617	ENSECAG00000012851	ZFR	93	84.656	Equus_caballus
ENSMZEG00005021243	zfr	82	76.854	ENSEEUG00000014206	ZFR	75	84.656	Erinaceus_europaeus
ENSMZEG00005021243	zfr	99	70.670	ENSELUG00000022743	zfr	99	71.136	Esox_lucius
ENSMZEG00005021243	zfr	100	70.442	ENSFCAG00000000354	ZFR	94	84.656	Felis_catus
ENSMZEG00005021243	zfr	100	67.008	ENSFALG00000002149	ZFR	94	87.500	Ficedula_albicollis
ENSMZEG00005021243	zfr	99	74.503	ENSFDAG00000012993	ZFR	94	83.523	Fukomys_damarensis
ENSMZEG00005021243	zfr	61	80.851	ENSFHEG00000012064	zfr	94	81.474	Fundulus_heteroclitus
ENSMZEG00005021243	zfr	94	91.892	ENSGMOG00000003967	zfr	86	90.323	Gadus_morhua
ENSMZEG00005021243	zfr	100	76.087	ENSGALG00000003235	-	94	87.500	Gallus_gallus
ENSMZEG00005021243	zfr	100	71.494	ENSGALG00000034488	-	76	74.101	Gallus_gallus
ENSMZEG00005021243	zfr	89	92.248	ENSGAFG00000016229	zfr	96	92.248	Gambusia_affinis
ENSMZEG00005021243	zfr	99	79.596	ENSGACG00000005045	zfr	93	84.364	Gasterosteus_aculeatus
ENSMZEG00005021243	zfr	94	76.957	ENSGAGG00000013544	ZFR	92	86.957	Gopherus_agassizii
ENSMZEG00005021243	zfr	100	75.000	ENSGGOG00000016302	ZFR	94	84.127	Gorilla_gorilla
ENSMZEG00005021243	zfr	100	70.404	ENSHGLG00000008088	ZFR	94	84.656	Heterocephalus_glaber_female
ENSMZEG00005021243	zfr	96	70.058	ENSHGLG00100016776	ZFR	92	85.315	Heterocephalus_glaber_male
ENSMZEG00005021243	zfr	84	81.594	ENSHCOG00000001548	zfr	93	89.560	Hippocampus_comes
ENSMZEG00005021243	zfr	100	90.000	ENSIPUG00000008192	zfr	94	90.000	Ictalurus_punctatus
ENSMZEG00005021243	zfr	100	73.362	ENSSTOG00000008742	ZFR	94	84.153	Ictidomys_tridecemlineatus
ENSMZEG00005021243	zfr	84	70.561	ENSJJAG00000023064	Zfr	76	71.172	Jaculus_jaculus
ENSMZEG00005021243	zfr	75	85.259	ENSKMAG00000009468	zfr	92	88.082	Kryptolebias_marmoratus
ENSMZEG00005021243	zfr	100	82.884	ENSLBEG00000010783	zfr	93	95.580	Labrus_bergylta
ENSMZEG00005021243	zfr	100	68.223	ENSLACG00000000831	ZFR	93	76.440	Latimeria_chalumnae
ENSMZEG00005021243	zfr	100	87.500	ENSLOCG00000006727	zfr	93	87.500	Lepisosteus_oculatus
ENSMZEG00005021243	zfr	98	74.356	ENSLAFG00000002308	ZFR	94	84.932	Loxodonta_africana
ENSMZEG00005021243	zfr	99	73.934	ENSMFAG00000042691	ZFR	91	83.333	Macaca_fascicularis
ENSMZEG00005021243	zfr	100	74.883	ENSMMUG00000001317	ZFR	94	84.656	Macaca_mulatta
ENSMZEG00005021243	zfr	100	74.883	ENSMNEG00000029441	ZFR	94	84.656	Macaca_nemestrina
ENSMZEG00005021243	zfr	100	68.479	ENSMLEG00000028503	ZFR	94	84.932	Mandrillus_leucophaeus
ENSMZEG00005021243	zfr	100	89.222	ENSMAMG00000017351	zfr	100	89.820	Mastacembelus_armatus
ENSMZEG00005021243	zfr	96	60.343	ENSMGAG00000002841	ZFR	86	83.444	Meleagris_gallopavo
ENSMZEG00005021243	zfr	100	73.617	ENSMAUG00000000976	Zfr	94	84.656	Mesocricetus_auratus
ENSMZEG00005021243	zfr	100	74.737	ENSMICG00000001244	ZFR	94	84.127	Microcebus_murinus
ENSMZEG00005021243	zfr	100	73.617	ENSMOCG00000018630	Zfr	94	84.656	Microtus_ochrogaster
ENSMZEG00005021243	zfr	100	75.293	ENSMODG00000020412	ZFR	94	84.127	Monodelphis_domestica
ENSMZEG00005021243	zfr	100	84.258	ENSMALG00000007123	zfr	94	96.774	Monopterus_albus
ENSMZEG00005021243	zfr	100	74.592	MGP_CAROLIEiJ_G0019681	Zfr	100	79.195	Mus_caroli
ENSMZEG00005021243	zfr	100	70.826	ENSMUSG00000022201	Zfr	94	84.656	Mus_musculus
ENSMZEG00005021243	zfr	100	74.709	MGP_PahariEiJ_G0016057	Zfr	100	78.859	Mus_pahari
ENSMZEG00005021243	zfr	100	75.058	MGP_SPRETEiJ_G0020574	Zfr	100	79.195	Mus_spretus
ENSMZEG00005021243	zfr	71	73.191	ENSMPUG00000015193	-	91	84.656	Mustela_putorius_furo
ENSMZEG00005021243	zfr	97	74.707	ENSMLUG00000011797	ZFR	93	85.616	Myotis_lucifugus
ENSMZEG00005021243	zfr	100	75.350	ENSNGAG00000018328	Zfr	94	84.656	Nannospalax_galili
ENSMZEG00005021243	zfr	100	96.603	ENSNBRG00000008378	zfr	100	96.603	Neolamprologus_brichardi
ENSMZEG00005021243	zfr	100	75.000	ENSNLEG00000014098	ZFR	94	84.932	Nomascus_leucogenys
ENSMZEG00005021243	zfr	96	71.429	ENSMEUG00000010225	ZFR	94	84.615	Notamacropus_eugenii
ENSMZEG00005021243	zfr	82	84.400	ENSOPRG00000016756	ZFR	78	84.064	Ochotona_princeps
ENSMZEG00005021243	zfr	96	70.345	ENSODEG00000001990	ZFR	94	85.315	Octodon_degus
ENSMZEG00005021243	zfr	100	63.806	ENSONIG00000013960	zfr	59	99.448	Oreochromis_niloticus
ENSMZEG00005021243	zfr	96	71.017	ENSOANG00000014434	ZFR	93	84.722	Ornithorhynchus_anatinus
ENSMZEG00005021243	zfr	100	75.000	ENSOCUG00000016737	ZFR	94	84.656	Oryctolagus_cuniculus
ENSMZEG00005021243	zfr	82	85.140	ENSORLG00000017243	zfr	93	92.818	Oryzias_latipes
ENSMZEG00005021243	zfr	82	85.018	ENSORLG00020014823	zfr	93	92.818	Oryzias_latipes_hni
ENSMZEG00005021243	zfr	82	84.775	ENSORLG00015005801	zfr	93	92.818	Oryzias_latipes_hsok
ENSMZEG00005021243	zfr	99	89.637	ENSOMEG00000003336	zfr	93	93.370	Oryzias_melastigma
ENSMZEG00005021243	zfr	100	73.617	ENSOGAG00000015117	ZFR	94	84.656	Otolemur_garnettii
ENSMZEG00005021243	zfr	96	74.824	ENSOARG00000012233	ZFR	94	75.659	Ovis_aries
ENSMZEG00005021243	zfr	97	74.883	ENSPPAG00000027447	ZFR	93	84.138	Pan_paniscus
ENSMZEG00005021243	zfr	100	70.442	ENSPPRG00000008253	ZFR	94	84.656	Panthera_pardus
ENSMZEG00005021243	zfr	100	74.473	ENSPTIG00000010038	ZFR	94	75.300	Panthera_tigris_altaica
ENSMZEG00005021243	zfr	100	75.000	ENSPTRG00000016771	ZFR	94	84.656	Pan_troglodytes
ENSMZEG00005021243	zfr	100	72.079	ENSPANG00000003729	ZFR	94	78.142	Papio_anubis
ENSMZEG00005021243	zfr	100	73.689	ENSPKIG00000007596	ZFR	100	73.756	Paramormyrops_kingsleyae
ENSMZEG00005021243	zfr	100	89.894	ENSPKIG00000016781	ZFR	94	89.894	Paramormyrops_kingsleyae
ENSMZEG00005021243	zfr	54	83.729	ENSPSIG00000005779	ZFR	99	83.060	Pelodiscus_sinensis
ENSMZEG00005021243	zfr	53	83.840	ENSPMGG00000015984	zfr	53	82.510	Periophthalmus_magnuspinnatus
ENSMZEG00005021243	zfr	96	73.617	ENSPEMG00000014573	Zfr	92	84.656	Peromyscus_maniculatus_bairdii
ENSMZEG00005021243	zfr	100	75.467	ENSPCIG00000020906	ZFR	94	84.127	Phascolarctos_cinereus
ENSMZEG00005021243	zfr	99	78.121	ENSPFOG00000005931	zfr	88	81.865	Poecilia_formosa
ENSMZEG00005021243	zfr	84	82.959	ENSPREG00000011947	zfr	76	85.627	Poecilia_reticulata
ENSMZEG00005021243	zfr	96	69.856	ENSPPYG00000015378	ZFR	94	84.932	Pongo_abelii
ENSMZEG00005021243	zfr	100	73.617	ENSPCAG00000007277	ZFR	94	84.656	Procavia_capensis
ENSMZEG00005021243	zfr	94	73.750	ENSPCOG00000000045	ZFR	93	84.656	Propithecus_coquereli
ENSMZEG00005021243	zfr	93	83.735	ENSPVAG00000004780	ZFR	88	84.656	Pteropus_vampyrus
ENSMZEG00005021243	zfr	100	99.900	ENSPNYG00000006239	zfr	100	99.900	Pundamilia_nyererei
ENSMZEG00005021243	zfr	100	89.947	ENSPNAG00000025151	zfr	100	86.395	Pygocentrus_nattereri
ENSMZEG00005021243	zfr	100	74.766	ENSRNOG00000011627	Zfr	100	84.496	Rattus_norvegicus
ENSMZEG00005021243	zfr	100	74.766	ENSRBIG00000041561	ZFR	94	84.656	Rhinopithecus_bieti
ENSMZEG00005021243	zfr	100	74.766	ENSRROG00000044008	ZFR	94	84.656	Rhinopithecus_roxellana
ENSMZEG00005021243	zfr	96	70.154	ENSSBOG00000024150	ZFR	93	85.315	Saimiri_boliviensis_boliviensis
ENSMZEG00005021243	zfr	96	70.785	ENSSHAG00000015478	ZFR	94	84.138	Sarcophilus_harrisii
ENSMZEG00005021243	zfr	100	71.244	ENSSFOG00015017300	ZFR	94	79.087	Scleropages_formosus
ENSMZEG00005021243	zfr	100	88.107	ENSSMAG00000000320	zfr	100	89.495	Scophthalmus_maximus
ENSMZEG00005021243	zfr	100	90.201	ENSSDUG00000013882	zfr	100	89.474	Seriola_dumerili
ENSMZEG00005021243	zfr	100	91.218	ENSSLDG00000000762	zfr	100	92.615	Seriola_lalandi_dorsalis
ENSMZEG00005021243	zfr	89	86.099	ENSSARG00000006571	ZFR	85	86.099	Sorex_araneus
ENSMZEG00005021243	zfr	96	70.741	ENSSPUG00000016786	ZFR	94	84.397	Sphenodon_punctatus
ENSMZEG00005021243	zfr	100	90.094	ENSSPAG00000019293	zfr	94	92.485	Stegastes_partitus
ENSMZEG00005021243	zfr	100	77.789	ENSSSCG00000027681	ZFR	94	84.656	Sus_scrofa
ENSMZEG00005021243	zfr	99	74.246	ENSTGUG00000001909	ZFR	94	83.616	Taeniopygia_guttata
ENSMZEG00005021243	zfr	86	81.808	ENSTRUG00000016620	zfr	76	85.662	Takifugu_rubripes
ENSMZEG00005021243	zfr	60	80.929	ENSTNIG00000018856	zfr	100	79.475	Tetraodon_nigroviridis
ENSMZEG00005021243	zfr	94	78.723	ENSTBEG00000017687	ZFR	93	78.723	Tupaia_belangeri
ENSMZEG00005021243	zfr	100	66.298	ENSTTRG00000017321	ZFR	94	73.022	Tursiops_truncatus
ENSMZEG00005021243	zfr	77	71.875	ENSUAMG00000000172	-	91	85.517	Ursus_americanus
ENSMZEG00005021243	zfr	77	71.875	ENSUMAG00000013805	-	92	85.517	Ursus_maritimus
ENSMZEG00005021243	zfr	100	74.941	ENSVPAG00000011011	ZFR	94	75.779	Vicugna_pacos
ENSMZEG00005021243	zfr	99	74.590	ENSVVUG00000022171	-	94	84.656	Vulpes_vulpes
ENSMZEG00005021243	zfr	82	86.098	ENSXCOG00000009361	zfr	76	86.220	Xiphophorus_couchianus
ENSMZEG00005021243	zfr	82	86.220	ENSXMAG00000013356	zfr	76	86.341	Xiphophorus_maculatus