EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021257 (Gene tree)
Gene ID: 101476206
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 13588 bases
Position: chrAGTA05000023.1:455134-468721
Accession: 101476206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028501	zf-RanBP	PF00641.18	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005029405	-	4309	XM_004546569	ENSMZEP00005028501	711 (aa)	XP_004546626	UPI000D30413D

Gene Model

Click here to download ENSMZEG00005021257's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04217	Necroptosis	KEGG
mze04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021257	shrprbck1r	100	84.379	ENSAPOG00000022737	shrprbck1r	100	83.961	Acanthochromis_polyacanthus
ENSMZEG00005021257	shrprbck1r	60	58.486	ENSAPOG00000023352	sharpin	95	57.798	Acanthochromis_polyacanthus
ENSMZEG00005021257	shrprbck1r	100	90.999	ENSACIG00000002184	shrprbck1r	100	90.999	Amphilophus_citrinellus
ENSMZEG00005021257	shrprbck1r	60	58.391	ENSAOCG00000017464	sharpin	95	57.701	Amphiprion_ocellaris
ENSMZEG00005021257	shrprbck1r	100	85.994	ENSAOCG00000002890	shrprbck1r	100	85.714	Amphiprion_ocellaris
ENSMZEG00005021257	shrprbck1r	100	84.078	ENSAPEG00000023274	shrprbck1r	100	83.799	Amphiprion_percula
ENSMZEG00005021257	shrprbck1r	60	58.391	ENSAPEG00000004049	sharpin	95	57.701	Amphiprion_percula
ENSMZEG00005021257	shrprbck1r	100	82.278	ENSATEG00000014561	shrprbck1r	100	82.278	Anabas_testudineus
ENSMZEG00005021257	shrprbck1r	60	57.541	ENSATEG00000007832	sharpin	88	56.845	Anabas_testudineus
ENSMZEG00005021257	shrprbck1r	100	99.859	ENSACLG00000022609	shrprbck1r	100	99.859	Astatotilapia_calliptera
ENSMZEG00005021257	shrprbck1r	55	57.436	ENSAMXG00000006229	sharpin	97	57.436	Astyanax_mexicanus
ENSMZEG00005021257	shrprbck1r	100	70.068	ENSAMXG00000021016	shrprbck1r	100	70.548	Astyanax_mexicanus
ENSMZEG00005021257	shrprbck1r	100	75.382	ENSCSEG00000011306	shrprbck1r	100	75.382	Cynoglossus_semilaevis
ENSMZEG00005021257	shrprbck1r	59	55.374	ENSCVAG00000006586	sharpin	95	54.673	Cyprinodon_variegatus
ENSMZEG00005021257	shrprbck1r	100	80.028	ENSCVAG00000007250	shrprbck1r	100	79.325	Cyprinodon_variegatus
ENSMZEG00005021257	shrprbck1r	100	70.401	ENSDARG00000059871	shrprbck1r	100	70.816	Danio_rerio
ENSMZEG00005021257	shrprbck1r	55	56.041	ENSDARG00000076995	sharpin	94	56.298	Danio_rerio
ENSMZEG00005021257	shrprbck1r	100	75.000	ENSELUG00000016022	shrprbck1r	100	75.000	Esox_lucius
ENSMZEG00005021257	shrprbck1r	59	55.916	ENSFHEG00000013564	sharpin	94	55.220	Fundulus_heteroclitus
ENSMZEG00005021257	shrprbck1r	51	59.940	ENSGMOG00000010123	sharpin	91	59.940	Gadus_morhua
ENSMZEG00005021257	shrprbck1r	100	78.340	ENSGAFG00000009309	shrprbck1r	100	77.637	Gambusia_affinis
ENSMZEG00005021257	shrprbck1r	59	43.529	ENSGAFG00000021405	sharpin	95	43.059	Gambusia_affinis
ENSMZEG00005021257	shrprbck1r	75	79.511	ENSGACG00000002544	shrprbck1r	100	79.511	Gasterosteus_aculeatus
ENSMZEG00005021257	shrprbck1r	100	99.297	ENSHBUG00000021933	shrprbck1r	100	99.297	Haplochromis_burtoni
ENSMZEG00005021257	shrprbck1r	62	51.794	ENSHCOG00000018847	sharpin	84	52.018	Hippocampus_comes
ENSMZEG00005021257	shrprbck1r	51	72.973	ENSIPUG00000011951	sharpin	97	72.973	Ictalurus_punctatus
ENSMZEG00005021257	shrprbck1r	96	68.687	ENSIPUG00000014247	shrprbck1r	97	67.137	Ictalurus_punctatus
ENSMZEG00005021257	shrprbck1r	100	78.502	ENSKMAG00000015215	shrprbck1r	100	78.502	Kryptolebias_marmoratus
ENSMZEG00005021257	shrprbck1r	60	56.977	ENSKMAG00000015204	sharpin	76	56.512	Kryptolebias_marmoratus
ENSMZEG00005021257	shrprbck1r	60	58.542	ENSLBEG00000016624	sharpin	96	57.859	Labrus_bergylta
ENSMZEG00005021257	shrprbck1r	100	84.248	ENSLBEG00000016876	shrprbck1r	100	84.248	Labrus_bergylta
ENSMZEG00005021257	shrprbck1r	95	52.770	ENSLACG00000010948	-	97	52.478	Latimeria_chalumnae
ENSMZEG00005021257	shrprbck1r	100	69.051	ENSLOCG00000008910	shrprbck1r	100	69.326	Lepisosteus_oculatus
ENSMZEG00005021257	shrprbck1r	100	81.716	ENSMAMG00000022930	shrprbck1r	100	81.716	Mastacembelus_armatus
ENSMZEG00005021257	shrprbck1r	60	43.702	ENSMAMG00000014645	sharpin	95	47.077	Mastacembelus_armatus
ENSMZEG00005021257	shrprbck1r	56	48.800	ENSMMOG00000016788	sharpin	76	65.035	Mola_mola
ENSMZEG00005021257	shrprbck1r	100	78.103	ENSMMOG00000003764	shrprbck1r	100	78.103	Mola_mola
ENSMZEG00005021257	shrprbck1r	57	45.070	ENSMALG00000020528	sharpin	96	45.748	Monopterus_albus
ENSMZEG00005021257	shrprbck1r	95	82.769	ENSMALG00000008861	shrprbck1r	95	82.769	Monopterus_albus
ENSMZEG00005021257	shrprbck1r	100	98.734	ENSNBRG00000002270	shrprbck1r	100	98.734	Neolamprologus_brichardi
ENSMZEG00005021257	shrprbck1r	55	55.366	ENSONIG00000009626	-	97	54.878	Oreochromis_niloticus
ENSMZEG00005021257	shrprbck1r	100	97.468	ENSONIG00000014401	shrprbck1r	100	97.468	Oreochromis_niloticus
ENSMZEG00005021257	shrprbck1r	100	79.044	ENSORLG00000007392	shrprbck1r	100	78.481	Oryzias_latipes
ENSMZEG00005021257	shrprbck1r	60	56.177	ENSORLG00000017281	sharpin	95	55.478	Oryzias_latipes
ENSMZEG00005021257	shrprbck1r	100	78.481	ENSORLG00020018619	shrprbck1r	100	77.918	Oryzias_latipes_hni
ENSMZEG00005021257	shrprbck1r	60	56.148	ENSORLG00020000801	sharpin	95	55.452	Oryzias_latipes_hni
ENSMZEG00005021257	shrprbck1r	60	56.381	ENSORLG00015009860	sharpin	95	55.684	Oryzias_latipes_hsok
ENSMZEG00005021257	shrprbck1r	100	78.481	ENSORLG00015018865	shrprbck1r	100	78.340	Oryzias_latipes_hsok
ENSMZEG00005021257	shrprbck1r	57	48.955	ENSOMEG00000005729	sharpin	89	49.844	Oryzias_melastigma
ENSMZEG00005021257	shrprbck1r	100	80.169	ENSOMEG00000012749	shrprbck1r	100	79.606	Oryzias_melastigma
ENSMZEG00005021257	shrprbck1r	100	73.120	ENSPKIG00000006933	shrprbck1r	100	73.120	Paramormyrops_kingsleyae
ENSMZEG00005021257	shrprbck1r	65	59.831	ENSPKIG00000018308	-	96	59.619	Paramormyrops_kingsleyae
ENSMZEG00005021257	shrprbck1r	100	75.843	ENSPMGG00000013254	shrprbck1r	100	75.562	Periophthalmus_magnuspinnatus
ENSMZEG00005021257	shrprbck1r	59	56.019	ENSPFOG00000015253	sharpin	95	55.324	Poecilia_formosa
ENSMZEG00005021257	shrprbck1r	100	79.044	ENSPFOG00000004214	shrprbck1r	100	78.340	Poecilia_formosa
ENSMZEG00005021257	shrprbck1r	59	56.250	ENSPLAG00000000423	sharpin	95	55.556	Poecilia_latipinna
ENSMZEG00005021257	shrprbck1r	100	78.903	ENSPLAG00000020523	shrprbck1r	100	78.200	Poecilia_latipinna
ENSMZEG00005021257	shrprbck1r	100	77.637	ENSPMEG00000006877	shrprbck1r	100	76.934	Poecilia_mexicana
ENSMZEG00005021257	shrprbck1r	52	50.769	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSMZEG00005021257	shrprbck1r	59	55.916	ENSPREG00000009702	sharpin	95	55.220	Poecilia_reticulata
ENSMZEG00005021257	shrprbck1r	100	76.793	ENSPREG00000014689	shrprbck1r	100	76.090	Poecilia_reticulata
ENSMZEG00005021257	shrprbck1r	100	99.437	ENSPNYG00000022601	shrprbck1r	100	99.437	Pundamilia_nyererei
ENSMZEG00005021257	shrprbck1r	100	68.852	ENSPNAG00000007847	shrprbck1r	100	69.041	Pygocentrus_nattereri
ENSMZEG00005021257	shrprbck1r	55	56.522	ENSPNAG00000002911	sharpin	99	56.633	Pygocentrus_nattereri
ENSMZEG00005021257	shrprbck1r	75	63.178	ENSSFOG00015014150	-	96	62.617	Scleropages_formosus
ENSMZEG00005021257	shrprbck1r	63	54.786	ENSSFOG00015004028	sharpin	99	54.600	Scleropages_formosus
ENSMZEG00005021257	shrprbck1r	100	80.194	ENSSMAG00000018085	shrprbck1r	100	80.194	Scophthalmus_maximus
ENSMZEG00005021257	shrprbck1r	60	45.455	ENSSDUG00000019039	sharpin	96	44.755	Seriola_dumerili
ENSMZEG00005021257	shrprbck1r	100	85.795	ENSSDUG00000002959	shrprbck1r	100	85.795	Seriola_dumerili
ENSMZEG00005021257	shrprbck1r	100	85.091	ENSSLDG00000009026	shrprbck1r	100	85.091	Seriola_lalandi_dorsalis
ENSMZEG00005021257	shrprbck1r	96	82.634	ENSSPAG00000016097	shrprbck1r	99	82.344	Stegastes_partitus
ENSMZEG00005021257	shrprbck1r	60	52.914	ENSTRUG00000011046	sharpin	96	51.264	Takifugu_rubripes
ENSMZEG00005021257	shrprbck1r	100	79.213	ENSTRUG00000006949	shrprbck1r	100	79.213	Takifugu_rubripes
ENSMZEG00005021257	shrprbck1r	55	56.716	ENSTNIG00000008521	sharpin	94	56.219	Tetraodon_nigroviridis
ENSMZEG00005021257	shrprbck1r	52	56.250	ENSXCOG00000015019	sharpin	96	56.250	Xiphophorus_couchianus
ENSMZEG00005021257	shrprbck1r	100	76.264	ENSXCOG00000006701	shrprbck1r	100	75.562	Xiphophorus_couchianus
ENSMZEG00005021257	shrprbck1r	59	56.351	ENSXMAG00000022076	sharpin	95	55.093	Xiphophorus_maculatus
ENSMZEG00005021257	shrprbck1r	100	76.124	ENSXMAG00000018972	shrprbck1r	100	75.421	Xiphophorus_maculatus