EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021333 (Gene tree)
Gene ID: 101474586
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 15729 bases
Position: chrLG7:11615077-11630805
Accession: 101474586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028617	ResIII	PF04851.15	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005029522	-	5103	XM_004553210	ENSMZEP00005028617	1700 (aa)	XP_004553267	-

Gene Model

Click here to download ENSMZEG00005021333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021333	chd2	54	80.171	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSMZEG00005021333	chd2	98	96.471	ENSAPOG00000008913	chd2	98	92.186	Acanthochromis_polyacanthus
ENSMZEG00005021333	chd2	99	90.819	ENSAOCG00000016332	chd2	98	90.819	Amphiprion_ocellaris
ENSMZEG00005021333	chd2	98	95.349	ENSAPEG00000016676	chd2	99	90.515	Amphiprion_percula
ENSMZEG00005021333	chd2	98	95.294	ENSATEG00000005246	chd2	98	89.298	Anabas_testudineus
ENSMZEG00005021333	chd2	96	72.212	ENSAPLG00000011141	-	91	73.927	Anas_platyrhynchos
ENSMZEG00005021333	chd2	99	100.000	ENSACLG00000021370	chd2	100	100.000	Astatotilapia_calliptera
ENSMZEG00005021333	chd2	96	72.755	ENSCAFG00000010998	CHD2	91	74.229	Canis_familiaris
ENSMZEG00005021333	chd2	73	80.231	ENSCHOG00000000608	-	69	80.328	Choloepus_hoffmanni
ENSMZEG00005021333	chd2	83	77.001	ENSCPBG00000018049	-	95	81.486	Chrysemys_picta_bellii
ENSMZEG00005021333	chd2	76	52.495	ENSCSAVG00000007580	-	94	58.125	Ciona_savignyi
ENSMZEG00005021333	chd2	100	77.603	ENSCSEG00000003646	chd2	98	77.286	Cynoglossus_semilaevis
ENSMZEG00005021333	chd2	98	92.941	ENSCVAG00000002427	chd2	98	79.780	Cyprinodon_variegatus
ENSMZEG00005021333	chd2	73	86.379	ENSDARG00000060687	chd2	96	78.833	Danio_rerio
ENSMZEG00005021333	chd2	54	75.532	ENSEBUG00000014994	chd2	79	76.087	Eptatretus_burgeri
ENSMZEG00005021333	chd2	94	74.129	ENSEASG00005015526	-	97	75.510	Equus_asinus_asinus
ENSMZEG00005021333	chd2	95	100.000	ENSELUG00000017981	chd2	98	81.350	Esox_lucius
ENSMZEG00005021333	chd2	99	82.709	ENSFHEG00000002119	chd2	98	83.228	Fundulus_heteroclitus
ENSMZEG00005021333	chd2	95	79.592	ENSGMOG00000002890	chd2	96	79.510	Gadus_morhua
ENSMZEG00005021333	chd2	99	85.023	ENSGAFG00000001905	chd2	97	85.081	Gambusia_affinis
ENSMZEG00005021333	chd2	83	78.768	ENSGAGG00000013176	-	98	81.905	Gopherus_agassizii
ENSMZEG00005021333	chd2	99	99.823	ENSHBUG00000017947	chd2	100	99.823	Haplochromis_burtoni
ENSMZEG00005021333	chd2	99	79.885	ENSHCOG00000008855	chd2	97	80.012	Hippocampus_comes
ENSMZEG00005021333	chd2	99	78.588	ENSIPUG00000000488	chd2	99	79.356	Ictalurus_punctatus
ENSMZEG00005021333	chd2	85	87.173	ENSKMAG00000015849	chd2	99	87.173	Kryptolebias_marmoratus
ENSMZEG00005021333	chd2	51	81.090	ENSLAFG00000016885	-	98	81.439	Loxodonta_africana
ENSMZEG00005021333	chd2	98	92.941	ENSMAMG00000009082	chd2	99	88.475	Mastacembelus_armatus
ENSMZEG00005021333	chd2	99	72.249	ENSMODG00000013158	-	69	74.922	Monodelphis_domestica
ENSMZEG00005021333	chd2	99	87.886	ENSMALG00000007755	chd2	98	87.908	Monopterus_albus
ENSMZEG00005021333	chd2	99	95.729	ENSNBRG00000020591	chd2	99	95.530	Neolamprologus_brichardi
ENSMZEG00005021333	chd2	72	75.218	ENSNLEG00000012349	-	96	67.604	Nomascus_leucogenys
ENSMZEG00005021333	chd2	71	77.368	ENSMEUG00000001522	-	68	79.592	Notamacropus_eugenii
ENSMZEG00005021333	chd2	98	100.000	ENSONIG00000015136	chd2	98	92.938	Oreochromis_niloticus
ENSMZEG00005021333	chd2	88	70.213	ENSOANG00000004385	-	99	69.936	Ornithorhynchus_anatinus
ENSMZEG00005021333	chd2	98	95.294	ENSORLG00000008403	chd2	98	85.394	Oryzias_latipes
ENSMZEG00005021333	chd2	98	95.181	ENSORLG00020004138	chd2	98	83.371	Oryzias_latipes_hni
ENSMZEG00005021333	chd2	98	95.349	ENSOMEG00000005831	chd2	98	77.834	Oryzias_melastigma
ENSMZEG00005021333	chd2	99	70.184	ENSOARG00000010343	-	98	72.928	Ovis_aries
ENSMZEG00005021333	chd2	99	81.197	ENSPKIG00000000495	chd2	95	81.079	Paramormyrops_kingsleyae
ENSMZEG00005021333	chd2	86	81.830	ENSPMGG00000009941	chd2	99	81.830	Periophthalmus_magnuspinnatus
ENSMZEG00005021333	chd2	93	72.249	ENSPCIG00000009417	-	99	77.070	Phascolarctos_cinereus
ENSMZEG00005021333	chd2	97	91.765	ENSPFOG00000007050	chd2	98	85.989	Poecilia_formosa
ENSMZEG00005021333	chd2	98	91.765	ENSPLAG00000005067	chd2	98	86.045	Poecilia_latipinna
ENSMZEG00005021333	chd2	97	91.765	ENSPMEG00000019628	chd2	98	88.249	Poecilia_mexicana
ENSMZEG00005021333	chd2	100	99.824	ENSPNYG00000010273	chd2	100	99.824	Pundamilia_nyererei
ENSMZEG00005021333	chd2	99	78.129	ENSPNAG00000016719	chd2	73	80.635	Pygocentrus_nattereri
ENSMZEG00005021333	chd2	96	71.666	ENSRROG00000041087	-	90	73.961	Rhinopithecus_roxellana
ENSMZEG00005021333	chd2	99	72.249	ENSSHAG00000012513	-	63	78.762	Sarcophilus_harrisii
ENSMZEG00005021333	chd2	99	83.505	ENSSFOG00015023759	chd2	94	82.353	Scleropages_formosus
ENSMZEG00005021333	chd2	99	89.167	ENSSMAG00000001726	chd2	99	89.167	Scophthalmus_maximus
ENSMZEG00005021333	chd2	99	88.978	ENSSLDG00000001146	chd2	99	89.977	Seriola_lalandi_dorsalis
ENSMZEG00005021333	chd2	69	82.329	ENSSARG00000014112	-	75	80.000	Sorex_araneus
ENSMZEG00005021333	chd2	100	68.554	ENSSPUG00000011266	-	70	75.559	Sphenodon_punctatus
ENSMZEG00005021333	chd2	99	90.217	ENSSPAG00000016452	chd2	99	89.528	Stegastes_partitus
ENSMZEG00005021333	chd2	93	71.163	ENSSSCG00000002266	-	96	70.139	Sus_scrofa
ENSMZEG00005021333	chd2	85	90.588	ENSTRUG00000008842	chd2	89	80.567	Takifugu_rubripes
ENSMZEG00005021333	chd2	88	91.753	ENSTNIG00000010760	chd2	97	85.659	Tetraodon_nigroviridis
ENSMZEG00005021333	chd2	68	66.990	ENSTBEG00000017730	-	76	70.652	Tupaia_belangeri
ENSMZEG00005021333	chd2	87	88.462	ENSTTRG00000000430	-	74	74.537	Tursiops_truncatus
ENSMZEG00005021333	chd2	75	87.161	ENSVPAG00000009645	-	57	87.161	Vicugna_pacos
ENSMZEG00005021333	chd2	93	74.768	ENSXETG00000024129	chd2	91	76.327	Xenopus_tropicalis
ENSMZEG00005021333	chd2	99	85.665	ENSXCOG00000020255	chd2	99	85.484	Xiphophorus_couchianus
ENSMZEG00005021333	chd2	97	90.588	ENSXMAG00000002707	chd2	98	87.903	Xiphophorus_maculatus