EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005021429 (Gene tree)
Gene ID
101464637
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Minus strand
Length
12672 bases
Position
chrLG3:22087710-22100381
Accession
101464637
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005028738RNA_pol_Rpb1_5PF04998.172.5e-10111
ENSMZEP00005028733RNA_pol_Rpb1_5PF04998.172.8e-10111
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29131
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29231
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29331
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29431
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29531
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29631
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29731
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29831
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-29931
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291031
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291131
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291231
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291331
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291431
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291531
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291631
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291731
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291831
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-291931
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292031
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292131
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292231
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292331
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292431
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292531
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292631
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292731
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292831
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-292931
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-293031
ENSMZEP00005028738RNA_pol_Rpb1_RPF05001.133.5e-293131
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23132
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23232
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23332
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23432
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23532
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23632
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23732
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23832
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-23932
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231032
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231132
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231232
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231332
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231432
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231532
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231632
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231732
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231832
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-231932
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232032
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232132
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232232
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232332
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232432
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232532
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232632
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232732
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232832
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-232932
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-233032
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-233132
ENSMZEP00005028733RNA_pol_Rpb1_RPF05001.131.2e-233232
ENSMZEP00005028738RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSMZEP00005028733RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSMZEP00005028738RNA_pol_Rpb1_2PF00623.206.7e-7511
ENSMZEP00005028733RNA_pol_Rpb1_2PF00623.207e-7511
ENSMZEP00005028738RNA_pol_Rpb1_3PF04983.183.2e-5011
ENSMZEP00005028733RNA_pol_Rpb1_3PF04983.183.4e-5011
ENSMZEP00005028738RNA_pol_Rpb1_1PF04997.121.1e-10811
ENSMZEP00005028733RNA_pol_Rpb1_1PF04997.121.2e-10811
ENSMZEP00005028738RNA_pol_Rpb1_7PF04990.122.1e-5511
ENSMZEP00005028733RNA_pol_Rpb1_7PF04990.122.2e-5511
ENSMZEP00005028738RNA_pol_Rpb1_6PF04992.146e-6711
ENSMZEP00005028733RNA_pol_Rpb1_6PF04992.146.3e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005029646-5751-ENSMZEP000050287381916 (aa)--
ENSMZET00005029641-8535XM_004562710ENSMZEP000050287331966 (aa)XP_004562767UPI0003299150
Gene Model
Click here to download ENSMZEG00005021429's gene model file
Pathways
Pathway IDPathway NameSource
mze03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021429's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005021429polr2a8798.511ENSAPOG00000006552polr2a9098.511Acanthochromis_polyacanthus
ENSMZEG00005021429polr2a8293.866ENSAMEG00000016265-8293.874Ailuropoda_melanoleuca
ENSMZEG00005021429polr2a10098.133ENSACIG00000015982polr2a10098.133Amphilophus_citrinellus
ENSMZEG00005021429polr2a9597.459ENSAOCG00000004255polr2a9397.459Amphiprion_ocellaris
ENSMZEG00005021429polr2a10098.830ENSAPEG00000012623polr2a10098.830Amphiprion_percula
ENSMZEG00005021429polr2a10098.728ENSATEG00000019644polr2a10098.728Anabas_testudineus
ENSMZEG00005021429polr2a8294.472ENSACAG00000014561POLR2A8294.479Anolis_carolinensis
ENSMZEG00005021429polr2a8294.227ENSANAG00000020093-8294.234Aotus_nancymaae
ENSMZEG00005021429polr2a100100.000ENSACLG00000006735polr2a100100.000Astatotilapia_calliptera
ENSMZEG00005021429polr2a10097.558ENSAMXG00000020046polr2a10097.558Astyanax_mexicanus
ENSMZEG00005021429polr2a8294.227ENSBTAG00000046765POLR2A8294.234Bos_taurus
ENSMZEG00005021429polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSMZEG00005021429polr2a8694.165ENSCAFG00000016532POLR2A9994.172Canis_familiaris
ENSMZEG00005021429polr2a8293.300ENSCAFG00020007929-8293.309Canis_lupus_dingo
ENSMZEG00005021429polr2a8294.227ENSCHIG00000027173-8294.234Capra_hircus
ENSMZEG00005021429polr2a9093.669ENSTSYG00000012803-8591.646Carlito_syrichta
ENSMZEG00005021429polr2a9890.773ENSCAPG00000001882-10093.300Cavia_aperea
ENSMZEG00005021429polr2a9988.659ENSCPOG00000014812-10093.056Cavia_porcellus
ENSMZEG00005021429polr2a8294.227ENSCCAG00000020938-8294.234Cebus_capucinus
ENSMZEG00005021429polr2a8294.165ENSCATG00000013680-8294.172Cercocebus_atys
ENSMZEG00005021429polr2a8294.103ENSCLAG00000012196-8294.110Chinchilla_lanigera
ENSMZEG00005021429polr2a8285.441ENSCSAG00000011644-8285.459Chlorocebus_sabaeus
ENSMZEG00005021429polr2a9083.895ENSCPBG00000012697POLR2A9985.519Chrysemys_picta_bellii
ENSMZEG00005021429polr2a9876.610ENSCING00000007884-9977.166Ciona_intestinalis
ENSMZEG00005021429polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSMZEG00005021429polr2a8293.482ENSCANG00000010622-8293.490Colobus_angolensis_palliatus
ENSMZEG00005021429polr2a8189.430ENSCGRG00001003538Polr2a8586.760Cricetulus_griseus_chok1gshd
ENSMZEG00005021429polr2a8290.596ENSCGRG00000012105Polr2a9390.564Cricetulus_griseus_crigri
ENSMZEG00005021429polr2a9997.455ENSCSEG00000002635polr2a10097.455Cynoglossus_semilaevis
ENSMZEG00005021429polr2a10098.271ENSCVAG00000005156polr2a10098.271Cyprinodon_variegatus
ENSMZEG00005021429polr2a10097.153ENSDARG00000099966polr2a10097.153Danio_rerio
ENSMZEG00005021429polr2a8290.797ENSDNOG00000016482-8290.808Dasypus_novemcinctus
ENSMZEG00005021429polr2a8294.227ENSDORG00000008667Polr2a8294.234Dipodomys_ordii
ENSMZEG00005021429polr2a9970.148FBgn0003277RpII2159875.280Drosophila_melanogaster
ENSMZEG00005021429polr2a9490.000ENSETEG00000002540-8791.096Echinops_telfairi
ENSMZEG00005021429polr2a8287.149ENSEBUG00000013967polr2a8287.135Eptatretus_burgeri
ENSMZEG00005021429polr2a8292.179ENSEASG00005019114-8392.188Equus_asinus_asinus
ENSMZEG00005021429polr2a8294.227ENSECAG00000018485POLR2A8294.234Equus_caballus
ENSMZEG00005021429polr2a8593.191ENSEEUG00000001154-9594.192Erinaceus_europaeus
ENSMZEG00005021429polr2a8893.754ENSELUG00000014284polr2a8493.754Esox_lucius
ENSMZEG00005021429polr2a8294.289ENSFDAG00000008287-8294.296Fukomys_damarensis
ENSMZEG00005021429polr2a9997.704ENSFHEG00000001768polr2a10097.704Fundulus_heteroclitus
ENSMZEG00005021429polr2a9992.410ENSGMOG00000007725polr2a10092.433Gadus_morhua
ENSMZEG00005021429polr2a99100.000ENSGAFG00000005389polr2a10093.797Gambusia_affinis
ENSMZEG00005021429polr2a9994.135ENSGACG00000019366polr2a10093.914Gasterosteus_aculeatus
ENSMZEG00005021429polr2a8292.198ENSGGOG00000014800-9692.690Gorilla_gorilla
ENSMZEG00005021429polr2a99100.000ENSHBUG00000018937polr2a100100.000Haplochromis_burtoni
ENSMZEG00005021429polr2a8294.289ENSHGLG00000012381POLR2A8294.296Heterocephalus_glaber_female
ENSMZEG00005021429polr2a8294.289ENSHGLG00100014843POLR2A8294.296Heterocephalus_glaber_male
ENSMZEG00005021429polr2a10097.762ENSHCOG00000011874polr2a10097.762Hippocampus_comes
ENSMZEG00005021429polr2a10097.304ENSIPUG00000002613Polr2a10097.304Ictalurus_punctatus
ENSMZEG00005021429polr2a8294.227ENSSTOG00000001304-8294.234Ictidomys_tridecemlineatus
ENSMZEG00005021429polr2a8294.227ENSJJAG00000013049Polr2a8294.234Jaculus_jaculus
ENSMZEG00005021429polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSMZEG00005021429polr2a9998.219ENSLBEG00000027652polr2a10098.219Labrus_bergylta
ENSMZEG00005021429polr2a8085.136ENSLACG00000012071POLR2A9193.367Latimeria_chalumnae
ENSMZEG00005021429polr2a8996.408ENSLOCG00000013863polr2a9795.965Lepisosteus_oculatus
ENSMZEG00005021429polr2a9991.006ENSLAFG00000008626-9794.234Loxodonta_africana
ENSMZEG00005021429polr2a5192.850ENSMFAG00000007042-9992.850Macaca_fascicularis
ENSMZEG00005021429polr2a8294.165ENSMMUG00000023620-9194.172Macaca_mulatta
ENSMZEG00005021429polr2a8293.731ENSMNEG00000040407-8293.738Macaca_nemestrina
ENSMZEG00005021429polr2a8089.747ENSMLEG00000030263-9992.850Mandrillus_leucophaeus
ENSMZEG00005021429polr2a10098.474ENSMAMG00000003351polr2a10098.474Mastacembelus_armatus
ENSMZEG00005021429polr2a5194.088ENSMAUG00000021055-9994.088Mesocricetus_auratus
ENSMZEG00005021429polr2a8294.165ENSMICG00000013372-9893.347Microcebus_murinus
ENSMZEG00005021429polr2a9990.990ENSMOCG00000018279Polr2a10091.001Microtus_ochrogaster
ENSMZEG00005021429polr2a9097.705ENSMMOG00000012515polr2a9297.705Mola_mola
ENSMZEG00005021429polr2a8293.917ENSMODG00000007009-8293.924Monodelphis_domestica
ENSMZEG00005021429polr2a9298.327ENSMALG00000008716polr2a9997.205Monopterus_albus
ENSMZEG00005021429polr2a8294.227MGP_CAROLIEiJ_G0016587Polr2a8294.234Mus_caroli
ENSMZEG00005021429polr2a8294.227ENSMUSG00000005198Polr2a8294.234Mus_musculus
ENSMZEG00005021429polr2a8292.151MGP_PahariEiJ_G0017718Polr2a8292.160Mus_pahari
ENSMZEG00005021429polr2a8294.227MGP_SPRETEiJ_G0017423Polr2a8294.234Mus_spretus
ENSMZEG00005021429polr2a8294.227ENSMPUG00000009648-8294.234Mustela_putorius_furo
ENSMZEG00005021429polr2a8293.738ENSMLUG00000009088-8293.746Myotis_lucifugus
ENSMZEG00005021429polr2a8294.227ENSNGAG00000002543Polr2a8294.234Nannospalax_galili
ENSMZEG00005021429polr2a10098.859ENSNBRG00000002005polr2a10098.859Neolamprologus_brichardi
ENSMZEG00005021429polr2a8292.817ENSNLEG00000009460-8293.460Nomascus_leucogenys
ENSMZEG00005021429polr2a9494.989ENSMEUG00000008611-9394.989Notamacropus_eugenii
ENSMZEG00005021429polr2a8093.936ENSOPRG00000015116-9993.936Ochotona_princeps
ENSMZEG00005021429polr2a8794.188ENSODEG00000017674-8589.827Octodon_degus
ENSMZEG00005021429polr2a10099.644ENSONIG00000009231polr2a10099.644Oreochromis_niloticus
ENSMZEG00005021429polr2a9990.172ENSOCUG00000017929-10094.110Oryctolagus_cuniculus
ENSMZEG00005021429polr2a10098.271ENSORLG00000006431polr2a10098.271Oryzias_latipes
ENSMZEG00005021429polr2a10098.271ENSORLG00020010235polr2a10098.271Oryzias_latipes_hni
ENSMZEG00005021429polr2a10098.169ENSORLG00015007075polr2a10098.169Oryzias_latipes_hsok
ENSMZEG00005021429polr2a9297.822ENSOMEG00000010713polr2a10097.822Oryzias_melastigma
ENSMZEG00005021429polr2a8294.227ENSOGAG00000033608-8294.234Otolemur_garnettii
ENSMZEG00005021429polr2a8994.227ENSOARG00000013874-9090.639Ovis_aries
ENSMZEG00005021429polr2a8193.346ENSPPAG00000043734-8989.108Pan_paniscus
ENSMZEG00005021429polr2a8292.817ENSPTRG00000008691POLR2A8293.460Pan_troglodytes
ENSMZEG00005021429polr2a8293.482ENSPANG00000024099-8293.490Papio_anubis
ENSMZEG00005021429polr2a7795.287ENSPKIG00000005727polr2a8595.287Paramormyrops_kingsleyae
ENSMZEG00005021429polr2a9892.527ENSPSIG00000014006POLR2A10092.441Pelodiscus_sinensis
ENSMZEG00005021429polr2a10097.324ENSPMGG00000019734polr2a10097.324Periophthalmus_magnuspinnatus
ENSMZEG00005021429polr2a8294.227ENSPEMG00000012521Polr2a8294.234Peromyscus_maniculatus_bairdii
ENSMZEG00005021429polr2a8693.921ENSPCIG00000028851-8293.921Phascolarctos_cinereus
ENSMZEG00005021429polr2a9998.153ENSPFOG00000007890polr2a9998.153Poecilia_formosa
ENSMZEG00005021429polr2a9998.153ENSPLAG00000007399polr2a9998.153Poecilia_latipinna
ENSMZEG00005021429polr2a9998.153ENSPMEG00000002071polr2a9998.153Poecilia_mexicana
ENSMZEG00005021429polr2a10098.169ENSPREG00000013122polr2a10098.169Poecilia_reticulata
ENSMZEG00005021429polr2a8294.227ENSPPYG00000007924-8294.234Pongo_abelii
ENSMZEG00005021429polr2a7495.000ENSPCAG00000006951-7495.000Procavia_capensis
ENSMZEG00005021429polr2a8292.927ENSPCOG00000025260-8293.460Propithecus_coquereli
ENSMZEG00005021429polr2a8293.917ENSPVAG00000005069-8293.924Pteropus_vampyrus
ENSMZEG00005021429polr2a10099.949ENSPNYG00000022340polr2a10099.949Pundamilia_nyererei
ENSMZEG00005021429polr2a10097.609ENSPNAG00000011237polr2a10097.609Pygocentrus_nattereri
ENSMZEG00005021429polr2a8294.165ENSRNOG00000028834Polr2a8294.172Rattus_norvegicus
ENSMZEG00005021429polr2a8293.855ENSRBIG00000002471-9193.862Rhinopithecus_bieti
ENSMZEG00005021429polr2a8294.165ENSRROG00000029583-8993.366Rhinopithecus_roxellana
ENSMZEG00005021429polr2a8250.376YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSMZEG00005021429polr2a8294.227ENSSBOG00000000808-8294.234Saimiri_boliviensis_boliviensis
ENSMZEG00005021429polr2a9393.917ENSSHAG00000002858-8493.924Sarcophilus_harrisii
ENSMZEG00005021429polr2a9997.256ENSSFOG00015023275polr2a10097.256Scleropages_formosus
ENSMZEG00005021429polr2a10094.812ENSSMAG00000009137polr2a10094.354Scophthalmus_maximus
ENSMZEG00005021429polr2a10098.779ENSSDUG00000020466polr2a10098.779Seriola_dumerili
ENSMZEG00005021429polr2a10098.728ENSSLDG00000020613polr2a10098.728Seriola_lalandi_dorsalis
ENSMZEG00005021429polr2a9589.892ENSSARG00000005875-9990.706Sorex_araneus
ENSMZEG00005021429polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSMZEG00005021429polr2a8293.296ENSSSCG00000028278-8293.304Sus_scrofa
ENSMZEG00005021429polr2a9892.511ENSTRUG00000012320polr2a8192.436Takifugu_rubripes
ENSMZEG00005021429polr2a9296.650ENSTNIG00000010136polr2a10096.650Tetraodon_nigroviridis
ENSMZEG00005021429polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSMZEG00005021429polr2a8292.551ENSTTRG00000014273-8292.560Tursiops_truncatus
ENSMZEG00005021429polr2a9393.025ENSUAMG00000014866-10091.342Ursus_americanus
ENSMZEG00005021429polr2a7491.602ENSUMAG00000015732-8391.061Ursus_maritimus
ENSMZEG00005021429polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSMZEG00005021429polr2a8294.165ENSVVUG00000027878-8394.172Vulpes_vulpes
ENSMZEG00005021429polr2a8193.833ENSXETG00000012465polr2a8293.840Xenopus_tropicalis
ENSMZEG00005021429polr2a9396.696ENSXCOG00000001804polr2a9596.696Xiphophorus_couchianus
ENSMZEG00005021429polr2a10098.169ENSXMAG00000015687polr2a10098.169Xiphophorus_maculatus

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