EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021491 (Gene tree)
Gene ID: 101483752
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: msx2-interacting protein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 17928 bases
Position: chrLG20:9727534-9745461
Accession: 101483752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028805	RRM_5	PF13893.6	3.8e-07	1	2
ENSMZEP00005028805	RRM_5	PF13893.6	3.8e-07	2	2
ENSMZEP00005028805	RRM_1	PF00076.22	1.3e-26	1	2
ENSMZEP00005028805	RRM_1	PF00076.22	1.3e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005029714	-	12256	XM_004570952	ENSMZEP00005028805	3172 (aa)	XP_004571009	-

Gene Model

Click here to download ENSMZEG00005021491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021491	-	99	83.228	ENSAPOG00000009853	-	89	83.223	Acanthochromis_polyacanthus
ENSMZEG00005021491	-	96	79.670	ENSAPOG00000011411	si:ch1073-335m2.2	89	79.670	Acanthochromis_polyacanthus
ENSMZEG00005021491	-	65	53.781	ENSAMEG00000011817	SPEN	87	42.523	Ailuropoda_melanoleuca
ENSMZEG00005021491	-	92	72.957	ENSAOCG00000008077	si:ch1073-335m2.2	98	71.812	Amphiprion_ocellaris
ENSMZEG00005021491	-	99	83.034	ENSAOCG00000014505	-	89	83.028	Amphiprion_ocellaris
ENSMZEG00005021491	-	94	76.042	ENSAPEG00000013515	si:ch1073-335m2.2	87	76.042	Amphiprion_percula
ENSMZEG00005021491	-	99	83.008	ENSAPEG00000010288	-	89	83.002	Amphiprion_percula
ENSMZEG00005021491	-	99	79.302	ENSATEG00000005627	-	90	78.363	Anabas_testudineus
ENSMZEG00005021491	-	96	78.378	ENSATEG00000007674	si:ch1073-335m2.2	89	78.378	Anabas_testudineus
ENSMZEG00005021491	-	99	45.150	ENSAPLG00000012618	SPEN	91	45.207	Anas_platyrhynchos
ENSMZEG00005021491	-	99	42.548	ENSANAG00000034428	SPEN	87	42.143	Aotus_nancymaae
ENSMZEG00005021491	-	99	99.746	ENSACLG00000016922	-	91	99.746	Astatotilapia_calliptera
ENSMZEG00005021491	-	96	84.024	ENSACLG00000021433	si:ch1073-335m2.2	91	84.024	Astatotilapia_calliptera
ENSMZEG00005021491	-	99	52.664	ENSAMXG00000012485	spen	89	52.972	Astyanax_mexicanus
ENSMZEG00005021491	-	99	42.601	ENSBTAG00000018729	SPEN	88	42.055	Bos_taurus
ENSMZEG00005021491	-	97	49.490	ENSCJAG00000008527	SPEN	87	41.877	Callithrix_jacchus
ENSMZEG00005021491	-	85	48.609	ENSCAFG00000016132	-	82	48.428	Canis_familiaris
ENSMZEG00005021491	-	98	42.300	ENSCHIG00000025070	SPEN	87	42.011	Capra_hircus
ENSMZEG00005021491	-	89	44.497	ENSTSYG00000036016	SPEN	85	45.684	Carlito_syrichta
ENSMZEG00005021491	-	93	74.163	ENSCAPG00000013803	SPEN	89	42.719	Cavia_aperea
ENSMZEG00005021491	-	93	74.163	ENSCPOG00000014036	SPEN	87	43.068	Cavia_porcellus
ENSMZEG00005021491	-	99	40.938	ENSCCAG00000020258	SPEN	83	43.880	Cebus_capucinus
ENSMZEG00005021491	-	84	66.935	ENSCATG00000015079	SPEN	88	66.935	Cercocebus_atys
ENSMZEG00005021491	-	82	66.397	ENSCLAG00000002018	SPEN	76	66.397	Chinchilla_lanigera
ENSMZEG00005021491	-	99	44.695	ENSCPBG00000010477	SPEN	90	44.604	Chrysemys_picta_bellii
ENSMZEG00005021491	-	88	44.353	ENSCANG00000034547	SPEN	82	44.064	Colobus_angolensis_palliatus
ENSMZEG00005021491	-	87	45.030	ENSCGRG00001007725	Spen	88	41.493	Cricetulus_griseus_chok1gshd
ENSMZEG00005021491	-	87	44.805	ENSCGRG00000010581	Spen	89	41.325	Cricetulus_griseus_crigri
ENSMZEG00005021491	-	99	73.113	ENSCSEG00000003915	-	89	72.956	Cynoglossus_semilaevis
ENSMZEG00005021491	-	99	73.415	ENSCVAG00000016346	-	89	73.384	Cyprinodon_variegatus
ENSMZEG00005021491	-	96	78.378	ENSCVAG00000009075	si:ch1073-335m2.2	88	78.378	Cyprinodon_variegatus
ENSMZEG00005021491	-	99	40.117	ENSDARG00000074332	si:ch1073-335m2.2	89	44.566	Danio_rerio
ENSMZEG00005021491	-	99	50.491	ENSDARG00000074245	spen	89	50.582	Danio_rerio
ENSMZEG00005021491	-	99	43.012	ENSDNOG00000041948	SPEN	77	45.807	Dasypus_novemcinctus
ENSMZEG00005021491	-	90	42.803	ENSDORG00000023909	Spen	82	42.523	Dipodomys_ordii
ENSMZEG00005021491	-	99	42.422	ENSEASG00005015911	SPEN	91	42.045	Equus_asinus_asinus
ENSMZEG00005021491	-	99	42.454	ENSECAG00000008833	SPEN	91	42.141	Equus_caballus
ENSMZEG00005021491	-	96	82.778	ENSELUG00000007726	si:ch1073-335m2.2	89	77.949	Esox_lucius
ENSMZEG00005021491	-	97	45.129	ENSFALG00000003551	SPEN	100	45.006	Ficedula_albicollis
ENSMZEG00005021491	-	87	44.741	ENSFDAG00000010212	SPEN	79	44.515	Fukomys_damarensis
ENSMZEG00005021491	-	97	72.947	ENSFHEG00000004544	si:ch1073-335m2.2	89	72.947	Fundulus_heteroclitus
ENSMZEG00005021491	-	99	59.536	ENSGMOG00000008397	-	90	59.411	Gadus_morhua
ENSMZEG00005021491	-	93	72.816	ENSGMOG00000008156	si:ch1073-335m2.2	87	72.816	Gadus_morhua
ENSMZEG00005021491	-	99	45.811	ENSGALG00000036932	SPEN	90	45.765	Gallus_gallus
ENSMZEG00005021491	-	99	74.953	ENSGAFG00000015819	-	89	74.984	Gambusia_affinis
ENSMZEG00005021491	-	95	82.941	ENSGAFG00000021570	si:ch1073-335m2.2	88	82.941	Gambusia_affinis
ENSMZEG00005021491	-	99	74.458	ENSGACG00000005341	-	90	74.364	Gasterosteus_aculeatus
ENSMZEG00005021491	-	99	40.561	ENSGACG00000001176	si:ch1073-335m2.2	90	40.559	Gasterosteus_aculeatus
ENSMZEG00005021491	-	99	45.904	ENSGAGG00000020785	SPEN	92	45.747	Gopherus_agassizii
ENSMZEG00005021491	-	88	45.595	ENSGGOG00000012041	SPEN	87	41.906	Gorilla_gorilla
ENSMZEG00005021491	-	99	99.398	ENSHBUG00000020626	-	89	99.398	Haplochromis_burtoni
ENSMZEG00005021491	-	96	84.024	ENSHBUG00000023253	si:ch1073-335m2.2	88	84.024	Haplochromis_burtoni
ENSMZEG00005021491	-	77	67.206	ENSHGLG00000019259	SPEN	70	67.206	Heterocephalus_glaber_female
ENSMZEG00005021491	-	65	67.206	ENSHGLG00100019294	SPEN	69	67.206	Heterocephalus_glaber_male
ENSMZEG00005021491	-	96	77.536	ENSHCOG00000006004	si:ch1073-335m2.2	91	77.536	Hippocampus_comes
ENSMZEG00005021491	-	99	49.923	ENSIPUG00000021668	spen	89	50.124	Ictalurus_punctatus
ENSMZEG00005021491	-	96	44.936	ENSIPUG00000018212	si:ch1073-335m2.2	92	44.490	Ictalurus_punctatus
ENSMZEG00005021491	-	87	67.339	ENSSTOG00000021428	SPEN	86	67.339	Ictidomys_tridecemlineatus
ENSMZEG00005021491	-	88	46.049	ENSJJAG00000010882	Spen	91	41.671	Jaculus_jaculus
ENSMZEG00005021491	-	99	76.069	ENSKMAG00000003882	-	89	76.101	Kryptolebias_marmoratus
ENSMZEG00005021491	-	96	82.530	ENSLBEG00000020855	si:ch1073-335m2.2	88	82.530	Labrus_bergylta
ENSMZEG00005021491	-	94	75.391	ENSLBEG00000019129	-	100	75.258	Labrus_bergylta
ENSMZEG00005021491	-	67	85.185	ENSLACG00000003258	SPEN	65	85.185	Latimeria_chalumnae
ENSMZEG00005021491	-	99	52.320	ENSLOCG00000007896	si:ch1073-335m2.2	91	53.108	Lepisosteus_oculatus
ENSMZEG00005021491	-	98	65.726	ENSLAFG00000004524	SPEN	85	65.726	Loxodonta_africana
ENSMZEG00005021491	-	84	66.935	ENSMLEG00000039293	SPEN	85	66.935	Mandrillus_leucophaeus
ENSMZEG00005021491	-	97	77.838	ENSMAMG00000023870	si:ch1073-335m2.2	88	77.838	Mastacembelus_armatus
ENSMZEG00005021491	-	96	84.024	ENSMZEG00005011762	si:ch1073-335m2.2	88	84.024	Maylandia_zebra
ENSMZEG00005021491	-	91	44.149	ENSMAUG00000008318	Spen	82	43.988	Mesocricetus_auratus
ENSMZEG00005021491	-	98	68.161	ENSMMOG00000021742	si:ch1073-335m2.2	90	68.161	Mola_mola
ENSMZEG00005021491	-	99	43.234	ENSMODG00000003411	SPEN	91	43.043	Monodelphis_domestica
ENSMZEG00005021491	-	99	80.132	ENSMALG00000008625	-	89	80.100	Monopterus_albus
ENSMZEG00005021491	-	88	44.536	MGP_CAROLIEiJ_G0026745	Spen	88	41.304	Mus_caroli
ENSMZEG00005021491	-	88	44.266	ENSMUSG00000040761	Spen	88	41.217	Mus_musculus
ENSMZEG00005021491	-	99	41.167	MGP_PahariEiJ_G0029076	Spen	88	41.510	Mus_pahari
ENSMZEG00005021491	-	99	41.411	MGP_SPRETEiJ_G0027724	Spen	88	41.382	Mus_spretus
ENSMZEG00005021491	-	63	77.778	ENSMPUG00000016317	SPEN	86	67.206	Mustela_putorius_furo
ENSMZEG00005021491	-	93	86.022	ENSMLUG00000010144	SPEN	83	86.022	Myotis_lucifugus
ENSMZEG00005021491	-	89	63.265	ENSNGAG00000000641	Spen	87	45.406	Nannospalax_galili
ENSMZEG00005021491	-	92	84.024	ENSNBRG00000005733	si:ch1073-335m2.2	88	84.024	Neolamprologus_brichardi
ENSMZEG00005021491	-	94	99.032	ENSNBRG00000022090	-	100	99.032	Neolamprologus_brichardi
ENSMZEG00005021491	-	88	82.292	ENSMEUG00000002422	SPEN	80	82.292	Notamacropus_eugenii
ENSMZEG00005021491	-	84	66.021	ENSOPRG00000015800	SPEN	74	65.294	Ochotona_princeps
ENSMZEG00005021491	-	99	40.294	ENSODEG00000016644	SPEN	90	40.304	Octodon_degus
ENSMZEG00005021491	-	99	96.139	ENSONIG00000006573	-	90	96.139	Oreochromis_niloticus
ENSMZEG00005021491	-	65	50.864	ENSOCUG00000010840	SPEN	88	42.134	Oryctolagus_cuniculus
ENSMZEG00005021491	-	95	64.530	ENSORLG00000018414	si:ch1073-335m2.2	89	74.372	Oryzias_latipes
ENSMZEG00005021491	-	97	66.143	ENSORLG00000028894	-	100	66.079	Oryzias_latipes
ENSMZEG00005021491	-	97	66.645	ENSORLG00020007735	-	100	66.549	Oryzias_latipes_hni
ENSMZEG00005021491	-	95	64.530	ENSORLG00020009351	si:ch1073-335m2.2	64	74.372	Oryzias_latipes_hni
ENSMZEG00005021491	-	99	66.992	ENSORLG00015022085	-	89	66.866	Oryzias_latipes_hsok
ENSMZEG00005021491	-	99	67.329	ENSOMEG00000007639	-	89	67.234	Oryzias_melastigma
ENSMZEG00005021491	-	95	82.822	ENSOMEG00000004509	si:ch1073-335m2.2	88	82.317	Oryzias_melastigma
ENSMZEG00005021491	-	98	67.871	ENSOGAG00000025110	SPEN	85	67.742	Otolemur_garnettii
ENSMZEG00005021491	-	98	42.315	ENSOARG00000008477	SPEN	86	42.261	Ovis_aries
ENSMZEG00005021491	-	82	66.935	ENSPANG00000006293	SPEN	85	66.935	Papio_anubis
ENSMZEG00005021491	-	99	50.579	ENSPKIG00000002617	SPEN	89	50.745	Paramormyrops_kingsleyae
ENSMZEG00005021491	-	99	55.603	ENSPKIG00000010492	si:ch1073-335m2.2	92	55.556	Paramormyrops_kingsleyae
ENSMZEG00005021491	-	99	44.896	ENSPSIG00000008026	SPEN	91	44.739	Pelodiscus_sinensis
ENSMZEG00005021491	-	87	44.943	ENSPEMG00000022997	Spen	89	41.713	Peromyscus_maniculatus_bairdii
ENSMZEG00005021491	-	96	77.838	ENSPLAG00000016625	si:ch1073-335m2.2	88	77.838	Poecilia_latipinna
ENSMZEG00005021491	-	99	75.174	ENSPMEG00000006764	-	89	75.174	Poecilia_mexicana
ENSMZEG00005021491	-	99	75.110	ENSPREG00000010399	-	89	75.110	Poecilia_reticulata
ENSMZEG00005021491	-	96	75.000	ENSPREG00000005357	si:ch1073-335m2.2	88	77.838	Poecilia_reticulata
ENSMZEG00005021491	-	88	45.257	ENSPPYG00000001834	SPEN	87	41.623	Pongo_abelii
ENSMZEG00005021491	-	90	65.323	ENSPCAG00000009543	SPEN	81	65.323	Procavia_capensis
ENSMZEG00005021491	-	70	65.587	ENSPVAG00000013794	SPEN	60	66.397	Pteropus_vampyrus
ENSMZEG00005021491	-	99	99.620	ENSPNYG00000012379	-	89	99.620	Pundamilia_nyererei
ENSMZEG00005021491	-	96	84.024	ENSPNYG00000009042	si:ch1073-335m2.2	88	84.024	Pundamilia_nyererei
ENSMZEG00005021491	-	99	54.374	ENSPNAG00000020795	spen	89	54.374	Pygocentrus_nattereri
ENSMZEG00005021491	-	87	66.803	ENSRNOG00000033556	Spen	90	41.500	Rattus_norvegicus
ENSMZEG00005021491	-	87	66.935	ENSRBIG00000039654	SPEN	85	66.935	Rhinopithecus_bieti
ENSMZEG00005021491	-	87	66.935	ENSRROG00000035686	SPEN	86	66.935	Rhinopithecus_roxellana
ENSMZEG00005021491	-	99	43.525	ENSSHAG00000004960	SPEN	91	43.458	Sarcophilus_harrisii
ENSMZEG00005021491	-	96	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	100	54.780	Scleropages_formosus
ENSMZEG00005021491	-	99	51.879	ENSSFOG00015010267	si:ch1073-335m2.2	89	52.046	Scleropages_formosus
ENSMZEG00005021491	-	69	69.820	ENSSMAG00000000125	si:ch1073-335m2.2	90	69.820	Scophthalmus_maximus
ENSMZEG00005021491	-	99	79.440	ENSSMAG00000008996	-	89	79.440	Scophthalmus_maximus
ENSMZEG00005021491	-	99	82.347	ENSSDUG00000003476	-	91	82.373	Seriola_dumerili
ENSMZEG00005021491	-	91	69.231	ENSSLDG00000023347	si:ch1073-335m2.2	82	69.231	Seriola_lalandi_dorsalis
ENSMZEG00005021491	-	99	82.150	ENSSLDG00000012950	-	89	82.270	Seriola_lalandi_dorsalis
ENSMZEG00005021491	-	97	43.871	ENSSPUG00000001866	-	100	43.701	Sphenodon_punctatus
ENSMZEG00005021491	-	99	84.137	ENSSPAG00000006014	-	89	83.943	Stegastes_partitus
ENSMZEG00005021491	-	97	80.220	ENSSPAG00000012454	si:ch1073-335m2.2	90	80.220	Stegastes_partitus
ENSMZEG00005021491	-	73	45.835	ENSSSCG00000034484	SPEN	74	45.895	Sus_scrofa
ENSMZEG00005021491	-	68	73.500	ENSTRUG00000021008	si:ch1073-335m2.2	100	73.500	Takifugu_rubripes
ENSMZEG00005021491	-	99	72.481	ENSTRUG00000024350	-	89	72.283	Takifugu_rubripes
ENSMZEG00005021491	-	96	88.845	ENSTNIG00000010907	-	90	88.845	Tetraodon_nigroviridis
ENSMZEG00005021491	-	71	81.421	ENSTBEG00000003628	SPEN	62	81.421	Tupaia_belangeri
ENSMZEG00005021491	-	70	74.163	ENSTTRG00000015704	SPEN	60	75.000	Tursiops_truncatus
ENSMZEG00005021491	-	63	78.283	ENSUAMG00000009600	SPEN	85	67.742	Ursus_americanus
ENSMZEG00005021491	-	97	78.283	ENSUMAG00000021641	SPEN	85	67.742	Ursus_maritimus
ENSMZEG00005021491	-	97	77.778	ENSVVUG00000028951	SPEN	91	66.802	Vulpes_vulpes
ENSMZEG00005021491	-	96	75.000	ENSXCOG00000004516	si:ch1073-335m2.2	90	75.000	Xiphophorus_couchianus
ENSMZEG00005021491	-	96	77.838	ENSXMAG00000029887	si:ch1073-335m2.2	88	77.838	Xiphophorus_maculatus
ENSMZEG00005021491	-	99	74.606	ENSXMAG00000021384	-	89	74.606	Xiphophorus_maculatus