EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021536 (Gene tree)
Gene ID: 101469971
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 6469 bases
Position: chrAGTA05000039.1:474713-481181
Accession: 101469971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005028858	RNA_pol_I_A49	PF06870.12	2e-115	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005029771	-	3814	XM_004564274	ENSMZEP00005028858	420 (aa)	XP_004564331	UPI000D3051ED

Gene Model

Click here to download ENSMZEG00005021536's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021536	polr1e	99	44.762	ENSG00000137054	POLR1E	99	44.762	Homo_sapiens
ENSMZEG00005021536	polr1e	99	73.077	ENSAPOG00000012452	polr1e	100	73.077	Acanthochromis_polyacanthus
ENSMZEG00005021536	polr1e	99	39.958	ENSAMEG00000010193	POLR1E	97	39.958	Ailuropoda_melanoleuca
ENSMZEG00005021536	polr1e	94	83.969	ENSACIG00000009884	polr1e	99	83.969	Amphilophus_citrinellus
ENSMZEG00005021536	polr1e	99	80.288	ENSAOCG00000005665	polr1e	100	80.288	Amphiprion_ocellaris
ENSMZEG00005021536	polr1e	99	80.769	ENSAPEG00000020581	polr1e	100	80.769	Amphiprion_percula
ENSMZEG00005021536	polr1e	99	78.125	ENSATEG00000020609	polr1e	100	78.125	Anabas_testudineus
ENSMZEG00005021536	polr1e	80	40.260	ENSAPLG00000010340	POLR1E	100	40.260	Anas_platyrhynchos
ENSMZEG00005021536	polr1e	99	44.656	ENSANAG00000038046	POLR1E	99	44.656	Aotus_nancymaae
ENSMZEG00005021536	polr1e	100	99.524	ENSACLG00000013685	polr1e	100	99.524	Astatotilapia_calliptera
ENSMZEG00005021536	polr1e	99	57.108	ENSAMXG00000018181	polr1e	99	57.108	Astyanax_mexicanus
ENSMZEG00005021536	polr1e	99	44.656	ENSBTAG00000012243	POLR1E	99	44.656	Bos_taurus
ENSMZEG00005021536	polr1e	90	45.910	ENSCJAG00000010512	POLR1E	94	45.910	Callithrix_jacchus
ENSMZEG00005021536	polr1e	99	43.059	ENSCAFG00000002377	POLR1E	99	43.059	Canis_familiaris
ENSMZEG00005021536	polr1e	99	42.824	ENSCAFG00020017851	POLR1E	99	42.824	Canis_lupus_dingo
ENSMZEG00005021536	polr1e	98	45.169	ENSCHIG00000019479	POLR1E	98	45.169	Capra_hircus
ENSMZEG00005021536	polr1e	99	44.706	ENSTSYG00000002075	POLR1E	99	44.706	Carlito_syrichta
ENSMZEG00005021536	polr1e	69	43.098	ENSCAPG00000015653	POLR1E	99	43.098	Cavia_aperea
ENSMZEG00005021536	polr1e	99	44.860	ENSCPOG00000009965	POLR1E	100	44.860	Cavia_porcellus
ENSMZEG00005021536	polr1e	99	40.811	ENSCCAG00000029460	POLR1E	99	40.811	Cebus_capucinus
ENSMZEG00005021536	polr1e	99	45.000	ENSCATG00000031732	POLR1E	99	45.000	Cercocebus_atys
ENSMZEG00005021536	polr1e	87	46.448	ENSCLAG00000012701	POLR1E	96	46.448	Chinchilla_lanigera
ENSMZEG00005021536	polr1e	99	45.000	ENSCSAG00000010782	POLR1E	99	45.000	Chlorocebus_sabaeus
ENSMZEG00005021536	polr1e	94	37.688	ENSCHOG00000013024	POLR1E	83	37.688	Choloepus_hoffmanni
ENSMZEG00005021536	polr1e	99	46.154	ENSCPBG00000006923	POLR1E	99	46.154	Chrysemys_picta_bellii
ENSMZEG00005021536	polr1e	99	45.476	ENSCANG00000036112	POLR1E	99	45.476	Colobus_angolensis_palliatus
ENSMZEG00005021536	polr1e	100	43.128	ENSCGRG00001006197	Polr1e	97	43.128	Cricetulus_griseus_chok1gshd
ENSMZEG00005021536	polr1e	100	42.891	ENSCGRG00000006430	Polr1e	97	42.891	Cricetulus_griseus_crigri
ENSMZEG00005021536	polr1e	99	68.675	ENSCSEG00000005121	polr1e	99	68.675	Cynoglossus_semilaevis
ENSMZEG00005021536	polr1e	99	76.442	ENSCVAG00000019759	polr1e	100	76.442	Cyprinodon_variegatus
ENSMZEG00005021536	polr1e	96	58.025	ENSDARG00000006434	polr1e	100	58.034	Danio_rerio
ENSMZEG00005021536	polr1e	99	40.211	ENSDNOG00000010257	POLR1E	99	40.211	Dasypus_novemcinctus
ENSMZEG00005021536	polr1e	84	42.340	ENSETEG00000018204	POLR1E	99	42.618	Echinops_telfairi
ENSMZEG00005021536	polr1e	99	43.468	ENSEASG00005000675	POLR1E	99	43.468	Equus_asinus_asinus
ENSMZEG00005021536	polr1e	99	43.468	ENSECAG00000014669	POLR1E	99	43.468	Equus_caballus
ENSMZEG00005021536	polr1e	99	38.942	ENSEEUG00000011928	POLR1E	86	38.942	Erinaceus_europaeus
ENSMZEG00005021536	polr1e	99	66.348	ENSELUG00000008150	polr1e	99	66.348	Esox_lucius
ENSMZEG00005021536	polr1e	99	43.943	ENSFCAG00000013081	POLR1E	99	43.943	Felis_catus
ENSMZEG00005021536	polr1e	94	45.500	ENSFALG00000012950	POLR1E	99	45.500	Ficedula_albicollis
ENSMZEG00005021536	polr1e	99	46.047	ENSFDAG00000016917	POLR1E	100	46.047	Fukomys_damarensis
ENSMZEG00005021536	polr1e	99	75.060	ENSFHEG00000009801	polr1e	100	75.060	Fundulus_heteroclitus
ENSMZEG00005021536	polr1e	98	55.000	ENSGMOG00000003336	POLR1E	99	55.000	Gadus_morhua
ENSMZEG00005021536	polr1e	99	45.238	ENSGALG00000005395	POLR1E	99	45.238	Gallus_gallus
ENSMZEG00005021536	polr1e	99	72.596	ENSGAFG00000004850	polr1e	100	72.596	Gambusia_affinis
ENSMZEG00005021536	polr1e	99	70.167	ENSGACG00000016087	polr1e	100	70.167	Gasterosteus_aculeatus
ENSMZEG00005021536	polr1e	96	42.543	ENSGAGG00000001659	POLR1E	99	42.243	Gopherus_agassizii
ENSMZEG00005021536	polr1e	99	45.000	ENSGGOG00000001882	POLR1E	99	45.865	Gorilla_gorilla
ENSMZEG00005021536	polr1e	100	98.810	ENSHBUG00000002559	polr1e	100	98.810	Haplochromis_burtoni
ENSMZEG00005021536	polr1e	99	44.965	ENSHGLG00000002036	POLR1E	100	44.965	Heterocephalus_glaber_female
ENSMZEG00005021536	polr1e	99	45.199	ENSHGLG00100012784	POLR1E	100	45.199	Heterocephalus_glaber_male
ENSMZEG00005021536	polr1e	99	70.913	ENSHCOG00000002774	polr1e	100	70.913	Hippocampus_comes
ENSMZEG00005021536	polr1e	99	56.010	ENSIPUG00000003019	polr1e	99	56.010	Ictalurus_punctatus
ENSMZEG00005021536	polr1e	99	44.019	ENSSTOG00000009810	POLR1E	99	44.019	Ictidomys_tridecemlineatus
ENSMZEG00005021536	polr1e	97	44.282	ENSJJAG00000020731	Polr1e	94	44.282	Jaculus_jaculus
ENSMZEG00005021536	polr1e	99	76.683	ENSKMAG00000000046	polr1e	100	76.683	Kryptolebias_marmoratus
ENSMZEG00005021536	polr1e	99	76.850	ENSLBEG00000003104	polr1e	99	76.850	Labrus_bergylta
ENSMZEG00005021536	polr1e	85	50.824	ENSLACG00000003416	POLR1E	99	50.824	Latimeria_chalumnae
ENSMZEG00005021536	polr1e	99	54.157	ENSLOCG00000012859	polr1e	99	54.157	Lepisosteus_oculatus
ENSMZEG00005021536	polr1e	99	44.601	ENSLAFG00000012831	POLR1E	99	44.601	Loxodonta_africana
ENSMZEG00005021536	polr1e	99	45.000	ENSMFAG00000045465	POLR1E	99	44.361	Macaca_fascicularis
ENSMZEG00005021536	polr1e	99	45.000	ENSMMUG00000017892	POLR1E	99	45.000	Macaca_mulatta
ENSMZEG00005021536	polr1e	99	41.628	ENSMNEG00000040283	POLR1E	99	41.628	Macaca_nemestrina
ENSMZEG00005021536	polr1e	99	45.000	ENSMLEG00000031135	POLR1E	99	45.000	Mandrillus_leucophaeus
ENSMZEG00005021536	polr1e	99	76.134	ENSMAMG00000001260	polr1e	99	76.134	Mastacembelus_armatus
ENSMZEG00005021536	polr1e	99	43.705	ENSMAUG00000021044	Polr1e	96	43.705	Mesocricetus_auratus
ENSMZEG00005021536	polr1e	99	44.706	ENSMICG00000003673	POLR1E	99	44.706	Microcebus_murinus
ENSMZEG00005021536	polr1e	100	42.654	ENSMOCG00000012920	Polr1e	97	42.654	Microtus_ochrogaster
ENSMZEG00005021536	polr1e	99	75.060	ENSMMOG00000007391	polr1e	100	75.060	Mola_mola
ENSMZEG00005021536	polr1e	90	46.825	ENSMODG00000002884	POLR1E	92	46.825	Monodelphis_domestica
ENSMZEG00005021536	polr1e	100	76.905	ENSMALG00000002665	polr1e	100	76.905	Monopterus_albus
ENSMZEG00005021536	polr1e	98	42.271	MGP_CAROLIEiJ_G0025967	Polr1e	98	42.211	Mus_caroli
ENSMZEG00005021536	polr1e	98	43.541	ENSMUSG00000028318	Polr1e	97	43.532	Mus_musculus
ENSMZEG00005021536	polr1e	98	44.337	MGP_PahariEiJ_G0024114	Polr1e	98	44.361	Mus_pahari
ENSMZEG00005021536	polr1e	98	44.019	MGP_SPRETEiJ_G0026930	Polr1e	98	44.030	Mus_spretus
ENSMZEG00005021536	polr1e	99	39.158	ENSMPUG00000006040	POLR1E	99	37.263	Mustela_putorius_furo
ENSMZEG00005021536	polr1e	99	44.656	ENSMLUG00000012688	POLR1E	96	44.656	Myotis_lucifugus
ENSMZEG00005021536	polr1e	97	45.255	ENSNGAG00000002520	Polr1e	94	45.255	Nannospalax_galili
ENSMZEG00005021536	polr1e	100	99.048	ENSNBRG00000016822	polr1e	100	99.048	Neolamprologus_brichardi
ENSMZEG00005021536	polr1e	99	44.524	ENSNLEG00000003616	POLR1E	99	45.113	Nomascus_leucogenys
ENSMZEG00005021536	polr1e	73	49.778	ENSMEUG00000015372	-	80	49.778	Notamacropus_eugenii
ENSMZEG00005021536	polr1e	85	39.286	ENSOPRG00000014206	POLR1E	99	39.286	Ochotona_princeps
ENSMZEG00005021536	polr1e	97	46.324	ENSODEG00000014565	POLR1E	94	46.324	Octodon_degus
ENSMZEG00005021536	polr1e	100	98.571	ENSONIG00000008921	polr1e	100	98.571	Oreochromis_niloticus
ENSMZEG00005021536	polr1e	99	43.059	ENSOCUG00000024773	POLR1E	99	43.294	Oryctolagus_cuniculus
ENSMZEG00005021536	polr1e	99	73.317	ENSORLG00000005143	polr1e	100	73.317	Oryzias_latipes
ENSMZEG00005021536	polr1e	92	71.762	ENSORLG00020007271	polr1e	99	71.762	Oryzias_latipes_hni
ENSMZEG00005021536	polr1e	99	73.317	ENSORLG00015000137	polr1e	100	73.317	Oryzias_latipes_hsok
ENSMZEG00005021536	polr1e	99	70.644	ENSOMEG00000013264	polr1e	99	70.644	Oryzias_melastigma
ENSMZEG00005021536	polr1e	99	43.468	ENSOGAG00000012981	POLR1E	97	43.468	Otolemur_garnettii
ENSMZEG00005021536	polr1e	98	45.411	ENSOARG00000011465	POLR1E	95	45.411	Ovis_aries
ENSMZEG00005021536	polr1e	99	44.762	ENSPPAG00000034566	POLR1E	99	45.113	Pan_paniscus
ENSMZEG00005021536	polr1e	99	44.762	ENSPPRG00000005649	POLR1E	99	44.762	Panthera_pardus
ENSMZEG00005021536	polr1e	99	44.762	ENSPTIG00000009774	POLR1E	99	44.762	Panthera_tigris_altaica
ENSMZEG00005021536	polr1e	99	44.762	ENSPTRG00000020944	POLR1E	99	45.113	Pan_troglodytes
ENSMZEG00005021536	polr1e	99	45.000	ENSPANG00000025563	POLR1E	99	45.000	Papio_anubis
ENSMZEG00005021536	polr1e	99	57.720	ENSPKIG00000003562	polr1e	99	57.720	Paramormyrops_kingsleyae
ENSMZEG00005021536	polr1e	97	43.765	ENSPSIG00000003274	POLR1E	95	44.499	Pelodiscus_sinensis
ENSMZEG00005021536	polr1e	94	66.917	ENSPMGG00000024169	polr1e	96	66.917	Periophthalmus_magnuspinnatus
ENSMZEG00005021536	polr1e	99	44.418	ENSPEMG00000019151	-	96	44.418	Peromyscus_maniculatus_bairdii
ENSMZEG00005021536	polr1e	99	37.709	ENSPEMG00000022300	-	96	37.709	Peromyscus_maniculatus_bairdii
ENSMZEG00005021536	polr1e	95	46.914	ENSPCIG00000014798	POLR1E	98	46.914	Phascolarctos_cinereus
ENSMZEG00005021536	polr1e	99	69.820	ENSPFOG00000019627	polr1e	99	69.820	Poecilia_formosa
ENSMZEG00005021536	polr1e	99	73.798	ENSPLAG00000022679	polr1e	100	73.798	Poecilia_latipinna
ENSMZEG00005021536	polr1e	86	75.556	ENSPMEG00000022123	polr1e	93	75.556	Poecilia_mexicana
ENSMZEG00005021536	polr1e	99	72.837	ENSPREG00000009470	polr1e	100	72.837	Poecilia_reticulata
ENSMZEG00005021536	polr1e	99	44.762	ENSPPYG00000019061	POLR1E	99	44.762	Pongo_abelii
ENSMZEG00005021536	polr1e	52	39.013	ENSPCAG00000004891	POLR1E	72	39.013	Procavia_capensis
ENSMZEG00005021536	polr1e	99	45.000	ENSPCOG00000027448	POLR1E	99	45.000	Propithecus_coquereli
ENSMZEG00005021536	polr1e	95	43.641	ENSPVAG00000007940	POLR1E	84	43.641	Pteropus_vampyrus
ENSMZEG00005021536	polr1e	100	99.048	ENSPNYG00000001032	polr1e	100	99.048	Pundamilia_nyererei
ENSMZEG00005021536	polr1e	99	57.212	ENSPNAG00000006987	polr1e	99	57.212	Pygocentrus_nattereri
ENSMZEG00005021536	polr1e	99	43.198	ENSRNOG00000012664	Polr1e	96	43.198	Rattus_norvegicus
ENSMZEG00005021536	polr1e	98	45.060	ENSRBIG00000034214	POLR1E	99	46.579	Rhinopithecus_bieti
ENSMZEG00005021536	polr1e	99	45.000	ENSRROG00000031986	POLR1E	99	45.000	Rhinopithecus_roxellana
ENSMZEG00005021536	polr1e	96	44.878	ENSSBOG00000021415	POLR1E	97	44.878	Saimiri_boliviensis_boliviensis
ENSMZEG00005021536	polr1e	82	47.414	ENSSHAG00000016084	POLR1E	95	47.414	Sarcophilus_harrisii
ENSMZEG00005021536	polr1e	99	60.192	ENSSFOG00015002293	polr1e	99	60.192	Scleropages_formosus
ENSMZEG00005021536	polr1e	99	77.327	ENSSMAG00000011672	polr1e	94	77.327	Scophthalmus_maximus
ENSMZEG00005021536	polr1e	100	78.810	ENSSDUG00000022279	polr1e	100	78.810	Seriola_dumerili
ENSMZEG00005021536	polr1e	100	78.095	ENSSLDG00000024918	polr1e	100	78.095	Seriola_lalandi_dorsalis
ENSMZEG00005021536	polr1e	55	41.379	ENSSARG00000009810	-	58	41.379	Sorex_araneus
ENSMZEG00005021536	polr1e	99	43.571	ENSSPUG00000009499	POLR1E	100	43.571	Sphenodon_punctatus
ENSMZEG00005021536	polr1e	99	80.288	ENSSPAG00000021240	polr1e	100	80.288	Stegastes_partitus
ENSMZEG00005021536	polr1e	99	42.588	ENSSSCG00000005347	POLR1E	99	42.588	Sus_scrofa
ENSMZEG00005021536	polr1e	94	38.789	ENSTGUG00000007169	POLR1E	100	38.789	Taeniopygia_guttata
ENSMZEG00005021536	polr1e	99	70.813	ENSTRUG00000020779	polr1e	99	70.813	Takifugu_rubripes
ENSMZEG00005021536	polr1e	99	71.635	ENSTNIG00000017812	polr1e	99	71.635	Tetraodon_nigroviridis
ENSMZEG00005021536	polr1e	94	45.088	ENSTBEG00000013786	POLR1E	84	45.000	Tupaia_belangeri
ENSMZEG00005021536	polr1e	98	43.301	ENSTTRG00000008294	POLR1E	87	43.301	Tursiops_truncatus
ENSMZEG00005021536	polr1e	99	44.444	ENSUAMG00000012474	POLR1E	100	46.757	Ursus_americanus
ENSMZEG00005021536	polr1e	99	44.444	ENSUMAG00000011496	POLR1E	99	44.444	Ursus_maritimus
ENSMZEG00005021536	polr1e	81	41.399	ENSVPAG00000009048	POLR1E	81	41.399	Vicugna_pacos
ENSMZEG00005021536	polr1e	99	42.588	ENSVVUG00000019954	POLR1E	99	42.588	Vulpes_vulpes
ENSMZEG00005021536	polr1e	99	42.654	ENSXETG00000006533	polr1e	99	42.654	Xenopus_tropicalis
ENSMZEG00005021536	polr1e	99	69.952	ENSXCOG00000013706	polr1e	100	69.952	Xiphophorus_couchianus
ENSMZEG00005021536	polr1e	99	74.760	ENSXMAG00000012484	polr1e	100	74.760	Xiphophorus_maculatus