EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005021675 (Gene tree)
Gene ID
101466231
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Plus strand
Length
11859 bases
Position
chrLG20:10389102-10400960
Accession
101466231
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005029122CSDPF00313.223.9e-8315
ENSMZEP00005029122CSDPF00313.223.9e-8325
ENSMZEP00005029122CSDPF00313.223.9e-8335
ENSMZEP00005029122CSDPF00313.223.9e-8345
ENSMZEP00005029122CSDPF00313.223.9e-8355
ENSMZEP00005029096CSDPF00313.227.1e-8315
ENSMZEP00005029096CSDPF00313.227.1e-8325
ENSMZEP00005029096CSDPF00313.227.1e-8335
ENSMZEP00005029096CSDPF00313.227.1e-8345
ENSMZEP00005029096CSDPF00313.227.1e-8355
ENSMZEP00005029111CSDPF00313.228.3e-8315
ENSMZEP00005029111CSDPF00313.228.3e-8325
ENSMZEP00005029111CSDPF00313.228.3e-8335
ENSMZEP00005029111CSDPF00313.228.3e-8345
ENSMZEP00005029111CSDPF00313.228.3e-8355
ENSMZEP00005029117CSDPF00313.221.2e-8215
ENSMZEP00005029117CSDPF00313.221.2e-8225
ENSMZEP00005029117CSDPF00313.221.2e-8235
ENSMZEP00005029117CSDPF00313.221.2e-8245
ENSMZEP00005029117CSDPF00313.221.2e-8255
ENSMZEP00005029082CSDPF00313.221.6e-8215
ENSMZEP00005029082CSDPF00313.221.6e-8225
ENSMZEP00005029082CSDPF00313.221.6e-8235
ENSMZEP00005029082CSDPF00313.221.6e-8245
ENSMZEP00005029082CSDPF00313.221.6e-8255
ENSMZEP00005029086CSDPF00313.222.5e-8215
ENSMZEP00005029086CSDPF00313.222.5e-8225
ENSMZEP00005029086CSDPF00313.222.5e-8235
ENSMZEP00005029086CSDPF00313.222.5e-8245
ENSMZEP00005029086CSDPF00313.222.5e-8255
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005030028-3626XM_004572746ENSMZEP00005029111861 (aa)XP_004572803-
ENSMZET00005030035-3596XM_004572747ENSMZEP00005029117851 (aa)XP_004572804UPI00032A2C8F
ENSMZET00005030000-3889-ENSMZEP00005029082913 (aa)--
ENSMZET00005030014-3700XM_012925160ENSMZEP00005029096850 (aa)XP_012780614-
ENSMZET00005030004-3871-ENSMZEP00005029086907 (aa)--
ENSMZET00005030040-2310-ENSMZEP00005029122769 (aa)--
Gene Model
Click here to download ENSMZEG00005021675's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021675's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005021675csde110077.373ENSG00000009307CSDE110085.294Homo_sapiens
ENSMZEG00005021675csde110093.628ENSAPOG00000015538csde110093.628Acanthochromis_polyacanthus
ENSMZEG00005021675csde110076.593ENSAMEG00000017129CSDE19872.662Ailuropoda_melanoleuca
ENSMZEG00005021675csde19095.676ENSACIG00000015175csde110095.676Amphilophus_citrinellus
ENSMZEG00005021675csde110093.368ENSAOCG00000011510csde110093.368Amphiprion_ocellaris
ENSMZEG00005021675csde110093.498ENSAPEG00000007194csde110093.498Amphiprion_percula
ENSMZEG00005021675csde110092.718ENSATEG00000003864csde110092.718Anabas_testudineus
ENSMZEG00005021675csde110079.454ENSAPLG00000008797CSDE110079.064Anas_platyrhynchos
ENSMZEG00005021675csde110076.500ENSACAG00000003120CSDE110079.125Anolis_carolinensis
ENSMZEG00005021675csde19361.433ENSANAG00000028396-9362.500Aotus_nancymaae
ENSMZEG00005021675csde110077.243ENSANAG00000024665CSDE19975.508Aotus_nancymaae
ENSMZEG00005021675csde1100100.000ENSACLG00000013296csde1100100.000Astatotilapia_calliptera
ENSMZEG00005021675csde110085.084ENSAMXG00000007436csde110084.565Astyanax_mexicanus
ENSMZEG00005021675csde110077.113ENSBTAG00000000678CSDE110077.113Bos_taurus
ENSMZEG00005021675csde110077.243ENSCJAG00000012565CSDE19975.627Callithrix_jacchus
ENSMZEG00005021675csde19877.822ENSCAFG00000009618CSDE19477.822Canis_familiaris
ENSMZEG00005021675csde110077.633ENSCAFG00020000481CSDE110077.633Canis_lupus_dingo
ENSMZEG00005021675csde110077.113ENSCHIG00000017250CSDE110077.113Capra_hircus
ENSMZEG00005021675csde110077.373ENSTSYG00000003747CSDE110077.373Carlito_syrichta
ENSMZEG00005021675csde19576.687ENSCAPG00000015128CSDE110076.687Cavia_aperea
ENSMZEG00005021675csde110071.808ENSCPOG00000040388CSDE110073.308Cavia_porcellus
ENSMZEG00005021675csde19655.111ENSCCAG00000030878-9154.889Cebus_capucinus
ENSMZEG00005021675csde19556.872ENSCCAG00000033677-9955.924Cebus_capucinus
ENSMZEG00005021675csde110077.243ENSCCAG00000036794CSDE110076.875Cebus_capucinus
ENSMZEG00005021675csde110077.373ENSCATG00000036962CSDE19975.747Cercocebus_atys
ENSMZEG00005021675csde110077.503ENSCLAG00000006618CSDE110077.503Chinchilla_lanigera
ENSMZEG00005021675csde110074.375ENSCSAG00000001658CSDE19975.747Chlorocebus_sabaeus
ENSMZEG00005021675csde19682.243ENSCHOG00000000918CSDE18981.040Choloepus_hoffmanni
ENSMZEG00005021675csde110079.584ENSCPBG00000016547CSDE110079.194Chrysemys_picta_bellii
ENSMZEG00005021675csde19742.047ENSCING00000014465-9841.774Ciona_intestinalis
ENSMZEG00005021675csde19741.161ENSCSAVG00000008100-10041.458Ciona_savignyi
ENSMZEG00005021675csde110077.373ENSCANG00000035096CSDE19975.627Colobus_angolensis_palliatus
ENSMZEG00005021675csde18979.259ENSCANG00000031069-9479.259Colobus_angolensis_palliatus
ENSMZEG00005021675csde110076.723ENSCGRG00001016833-10076.723Cricetulus_griseus_chok1gshd
ENSMZEG00005021675csde110063.069ENSCGRG00001014011-10063.069Cricetulus_griseus_chok1gshd
ENSMZEG00005021675csde19673.111ENSCGRG00000002225-10073.111Cricetulus_griseus_crigri
ENSMZEG00005021675csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSMZEG00005021675csde110091.157ENSCSEG00000002620csde110091.157Cynoglossus_semilaevis
ENSMZEG00005021675csde110091.678ENSCVAG00000001344csde110091.678Cyprinodon_variegatus
ENSMZEG00005021675csde110082.353ENSDARG00000074758csde110085.607Danio_rerio
ENSMZEG00005021675csde16250.951ENSDNOG00000034464-9964.762Dasypus_novemcinctus
ENSMZEG00005021675csde110077.792ENSDNOG00000010287-9377.792Dasypus_novemcinctus
ENSMZEG00005021675csde19976.119ENSDORG00000011609Csde110076.625Dipodomys_ordii
ENSMZEG00005021675csde19648.057FBgn0263352Unr8648.406Drosophila_melanogaster
ENSMZEG00005021675csde19960.156ENSETEG00000013678-9960.156Echinops_telfairi
ENSMZEG00005021675csde18981.148ENSETEG00000002491-8671.470Echinops_telfairi
ENSMZEG00005021675csde17953.465ENSETEG00000007109-9953.465Echinops_telfairi
ENSMZEG00005021675csde19068.671ENSETEG00000006280-9968.671Echinops_telfairi
ENSMZEG00005021675csde19953.202ENSEBUG00000008647csde19953.222Eptatretus_burgeri
ENSMZEG00005021675csde110077.763ENSEASG00005006284CSDE110077.375Equus_asinus_asinus
ENSMZEG00005021675csde110077.763ENSECAG00000020885CSDE110077.375Equus_caballus
ENSMZEG00005021675csde19381.562ENSEEUG00000006286CSDE16881.562Erinaceus_europaeus
ENSMZEG00005021675csde110085.511ENSELUG00000015507csde110084.864Esox_lucius
ENSMZEG00005021675csde110077.633ENSFCAG00000029266CSDE110077.633Felis_catus
ENSMZEG00005021675csde110075.875ENSFALG00000003407CSDE110078.500Ficedula_albicollis
ENSMZEG00005021675csde19975.970ENSFDAG00000007882CSDE110076.500Fukomys_damarensis
ENSMZEG00005021675csde110091.057ENSFHEG00000010799csde110091.729Fundulus_heteroclitus
ENSMZEG00005021675csde19985.338ENSGMOG00000012731csde110088.471Gadus_morhua
ENSMZEG00005021675csde19876.306ENSGALG00000002139CSDE19878.981Gallus_gallus
ENSMZEG00005021675csde19492.214ENSGAFG00000005241csde19592.214Gambusia_affinis
ENSMZEG00005021675csde19988.833ENSGACG00000004544csde110092.095Gasterosteus_aculeatus
ENSMZEG00005021675csde110079.454ENSGAGG00000017685CSDE110079.000Gopherus_agassizii
ENSMZEG00005021675csde110077.373ENSGGOG00000002164CSDE110077.373Gorilla_gorilla
ENSMZEG00005021675csde1100100.000ENSHBUG00000020315csde1100100.000Haplochromis_burtoni
ENSMZEG00005021675csde19666.000ENSHGLG00000010039-10066.000Heterocephalus_glaber_female
ENSMZEG00005021675csde19967.463ENSHGLG00000008555-10067.463Heterocephalus_glaber_female
ENSMZEG00005021675csde110069.571ENSHGLG00000003829-10069.571Heterocephalus_glaber_female
ENSMZEG00005021675csde19966.841ENSHGLG00000007471-9866.841Heterocephalus_glaber_female
ENSMZEG00005021675csde110063.476ENSHGLG00000019549-10064.662Heterocephalus_glaber_female
ENSMZEG00005021675csde110070.351ENSHGLG00000009620-10070.741Heterocephalus_glaber_female
ENSMZEG00005021675csde19959.825ENSHGLG00000000650-9962.328Heterocephalus_glaber_female
ENSMZEG00005021675csde19965.531ENSHGLG00100007287-9865.531Heterocephalus_glaber_male
ENSMZEG00005021675csde19963.046ENSHGLG00100002245-9965.543Heterocephalus_glaber_male
ENSMZEG00005021675csde110063.636ENSHGLG00100001846-10063.377Heterocephalus_glaber_male
ENSMZEG00005021675csde19660.444ENSHGLG00100004833-10060.444Heterocephalus_glaber_male
ENSMZEG00005021675csde110065.150ENSHGLG00100012072-10065.150Heterocephalus_glaber_male
ENSMZEG00005021675csde110077.113ENSHGLG00100019438-10077.113Heterocephalus_glaber_male
ENSMZEG00005021675csde19365.229ENSHGLG00100004195-10064.951Heterocephalus_glaber_male
ENSMZEG00005021675csde19665.778ENSHGLG00100006910-10065.778Heterocephalus_glaber_male
ENSMZEG00005021675csde110090.897ENSHCOG00000004158csde110090.897Hippocampus_comes
ENSMZEG00005021675csde110084.565ENSIPUG00000000355csde110083.917Ictalurus_punctatus
ENSMZEG00005021675csde110063.520ENSSTOG00000030994-10063.393Ictidomys_tridecemlineatus
ENSMZEG00005021675csde19065.503ENSSTOG00000032722-9865.503Ictidomys_tridecemlineatus
ENSMZEG00005021675csde19976.119ENSJJAG00000019571Csde110076.625Jaculus_jaculus
ENSMZEG00005021675csde110091.462ENSKMAG00000005685csde110091.811Kryptolebias_marmoratus
ENSMZEG00005021675csde110092.588ENSLBEG00000014770csde110092.588Labrus_bergylta
ENSMZEG00005021675csde110073.580ENSLACG00000018452CSDE19973.949Latimeria_chalumnae
ENSMZEG00005021675csde110082.491ENSLOCG00000010413csde110083.118Lepisosteus_oculatus
ENSMZEG00005021675csde110077.243ENSLAFG00000007150CSDE19677.243Loxodonta_africana
ENSMZEG00005021675csde110077.373ENSMFAG00000003674CSDE110077.373Macaca_fascicularis
ENSMZEG00005021675csde110077.373ENSMMUG00000001974CSDE110077.373Macaca_mulatta
ENSMZEG00005021675csde110077.373ENSMNEG00000045247CSDE19975.747Macaca_nemestrina
ENSMZEG00005021675csde110077.113ENSMLEG00000038673CSDE19975.508Mandrillus_leucophaeus
ENSMZEG00005021675csde110093.628ENSMAMG00000008821csde110093.628Mastacembelus_armatus
ENSMZEG00005021675csde110079.351ENSMGAG00000016381CSDE110078.961Meleagris_gallopavo
ENSMZEG00005021675csde19975.821ENSMAUG00000014031Csde110076.375Mesocricetus_auratus
ENSMZEG00005021675csde110077.503ENSMICG00000002050CSDE19875.718Microcebus_murinus
ENSMZEG00005021675csde110076.723ENSMOCG00000018960Csde110076.723Microtus_ochrogaster
ENSMZEG00005021675csde110093.238ENSMMOG00000015075csde110093.238Mola_mola
ENSMZEG00005021675csde110077.821ENSMODG00000004685CSDE110078.125Monodelphis_domestica
ENSMZEG00005021675csde110093.238ENSMALG00000007132csde110093.238Monopterus_albus
ENSMZEG00005021675csde110076.853MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSMZEG00005021675csde110076.853ENSMUSG00000068823Csde110084.106Mus_musculus
ENSMZEG00005021675csde110076.853MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSMZEG00005021675csde110076.853MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSMZEG00005021675csde19874.745ENSMPUG00000005753CSDE19977.423Mustela_putorius_furo
ENSMZEG00005021675csde110077.113ENSMLUG00000005681CSDE19873.261Myotis_lucifugus
ENSMZEG00005021675csde19652.000ENSNGAG00000012599-10052.000Nannospalax_galili
ENSMZEG00005021675csde19975.672ENSNGAG00000021929Csde110076.250Nannospalax_galili
ENSMZEG00005021675csde1100100.000ENSNBRG00000020808csde1100100.000Neolamprologus_brichardi
ENSMZEG00005021675csde110077.373ENSNLEG00000004842CSDE19975.747Nomascus_leucogenys
ENSMZEG00005021675csde19384.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSMZEG00005021675csde19482.243ENSOPRG00000005002CSDE18073.381Ochotona_princeps
ENSMZEG00005021675csde19652.097ENSODEG00000005979-9852.097Octodon_degus
ENSMZEG00005021675csde19975.970ENSODEG00000007383-10076.375Octodon_degus
ENSMZEG00005021675csde110093.880ENSONIG00000009309csde110097.430Oreochromis_niloticus
ENSMZEG00005021675csde110081.356ENSOANG00000003346-8281.356Ornithorhynchus_anatinus
ENSMZEG00005021675csde110076.983ENSOCUG00000016438CSDE19975.118Oryctolagus_cuniculus
ENSMZEG00005021675csde110091.678ENSORLG00000000707csde110091.678Oryzias_latipes
ENSMZEG00005021675csde110091.422ENSORLG00020005148csde110091.422Oryzias_latipes_hni
ENSMZEG00005021675csde110091.547ENSORLG00015019415csde110091.547Oryzias_latipes_hsok
ENSMZEG00005021675csde110090.897ENSOMEG00000015656csde110091.678Oryzias_melastigma
ENSMZEG00005021675csde110077.503ENSOGAG00000012127CSDE19477.503Otolemur_garnettii
ENSMZEG00005021675csde110077.113ENSOARG00000020034CSDE19873.141Ovis_aries
ENSMZEG00005021675csde110077.373ENSPPAG00000025861CSDE110077.373Pan_paniscus
ENSMZEG00005021675csde110077.633ENSPPRG00000006747CSDE19875.957Panthera_pardus
ENSMZEG00005021675csde110077.633ENSPTIG00000015468CSDE110077.250Panthera_tigris_altaica
ENSMZEG00005021675csde110077.373ENSPTRG00000033721CSDE110077.000Pan_troglodytes
ENSMZEG00005021675csde110077.373ENSPANG00000018873CSDE110077.373Papio_anubis
ENSMZEG00005021675csde110084.785ENSPKIG00000009459csde110084.785Paramormyrops_kingsleyae
ENSMZEG00005021675csde19281.678ENSPSIG00000003823CSDE19483.217Pelodiscus_sinensis
ENSMZEG00005021675csde110090.260ENSPMGG00000000772csde110089.610Periophthalmus_magnuspinnatus
ENSMZEG00005021675csde19976.119ENSPEMG00000020357-10076.625Peromyscus_maniculatus_bairdii
ENSMZEG00005021675csde110075.625ENSPCIG00000022587CSDE110078.250Phascolarctos_cinereus
ENSMZEG00005021675csde19789.736ENSPFOG00000012664csde110090.824Poecilia_formosa
ENSMZEG00005021675csde19584.946ENSPLAG00000017680csde19384.946Poecilia_latipinna
ENSMZEG00005021675csde19585.253ENSPMEG00000005094csde19585.253Poecilia_mexicana
ENSMZEG00005021675csde110091.647ENSPREG00000011631csde110091.621Poecilia_reticulata
ENSMZEG00005021675csde110074.250ENSPPYG00000000996CSDE110076.875Pongo_abelii
ENSMZEG00005021675csde19683.178ENSPCAG00000014368CSDE19477.093Procavia_capensis
ENSMZEG00005021675csde19070.260ENSPCOG00000008223-9270.260Propithecus_coquereli
ENSMZEG00005021675csde110077.633ENSPCOG00000017893CSDE110077.633Propithecus_coquereli
ENSMZEG00005021675csde110072.172ENSPVAG00000008225CSDE19572.172Pteropus_vampyrus
ENSMZEG00005021675csde1100100.000ENSPNYG00000013745csde1100100.000Pundamilia_nyererei
ENSMZEG00005021675csde110086.252ENSPNAG00000001958csde110085.603Pygocentrus_nattereri
ENSMZEG00005021675csde110073.750ENSRNOG00000061058Csde110076.375Rattus_norvegicus
ENSMZEG00005021675csde110074.416ENSRBIG00000038088-10074.416Rhinopithecus_bieti
ENSMZEG00005021675csde110072.987ENSRBIG00000038966-9971.190Rhinopithecus_bieti
ENSMZEG00005021675csde110077.373ENSRROG00000043101CSDE19975.747Rhinopithecus_roxellana
ENSMZEG00005021675csde110077.243ENSSBOG00000035592CSDE19975.627Saimiri_boliviensis_boliviensis
ENSMZEG00005021675csde110078.674ENSSHAG00000009831CSDE110078.674Sarcophilus_harrisii
ENSMZEG00005021675csde110095.238ENSSFOG00015007498csde19395.238Scleropages_formosus
ENSMZEG00005021675csde110093.117ENSSMAG00000007203csde110092.848Scophthalmus_maximus
ENSMZEG00005021675csde110094.408ENSSDUG00000015380csde110094.408Seriola_dumerili
ENSMZEG00005021675csde110094.408ENSSLDG00000008819csde110094.408Seriola_lalandi_dorsalis
ENSMZEG00005021675csde110076.983ENSSARG00000000738CSDE19972.640Sorex_araneus
ENSMZEG00005021675csde110079.714ENSSPUG00000008714CSDE110079.324Sphenodon_punctatus
ENSMZEG00005021675csde110093.882ENSSPAG00000000716csde110093.882Stegastes_partitus
ENSMZEG00005021675csde110077.763ENSSSCG00000006752CSDE110077.763Sus_scrofa
ENSMZEG00005021675csde110075.187ENSTGUG00000000972CSDE110077.805Taeniopygia_guttata
ENSMZEG00005021675csde110086.216ENSTRUG00000007996csde110086.216Takifugu_rubripes
ENSMZEG00005021675csde18895.019ENSTNIG00000010878csde110095.019Tetraodon_nigroviridis
ENSMZEG00005021675csde17580.368ENSTBEG00000011880-6080.368Tupaia_belangeri
ENSMZEG00005021675csde110076.853ENSTTRG00000015583CSDE19476.853Tursiops_truncatus
ENSMZEG00005021675csde18973.034ENSUAMG00000024289-9973.034Ursus_americanus
ENSMZEG00005021675csde19282.353ENSUAMG00000021779-9882.609Ursus_americanus
ENSMZEG00005021675csde19172.749ENSUMAG00000011714-9972.749Ursus_maritimus
ENSMZEG00005021675csde110071.001ENSUMAG00000009720-9771.001Ursus_maritimus
ENSMZEG00005021675csde110080.420ENSVPAG00000000749CSDE17980.420Vicugna_pacos
ENSMZEG00005021675csde19372.886ENSVVUG00000009890CSDE19475.948Vulpes_vulpes
ENSMZEG00005021675csde110075.218ENSXETG00000021448csde110077.709Xenopus_tropicalis
ENSMZEG00005021675csde19494.553ENSXCOG00000000035csde18994.553Xiphophorus_couchianus
ENSMZEG00005021675csde110091.647ENSXMAG00000009080csde110091.462Xiphophorus_maculatus

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