EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021733 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 62225 bases
Position: chrAGTA05000040.1:325552-387776
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005029160	SRRM_C	PF15230.6	5.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005030078	-	1320	-	ENSMZEP00005029160	439 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005021733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021733	srrm4	98	78.322	ENSACIG00000002171	srrm4	92	79.254	Amphilophus_citrinellus
ENSMZEG00005021733	srrm4	78	94.444	ENSAOCG00000019891	srrm4	63	94.444	Amphiprion_ocellaris
ENSMZEG00005021733	srrm4	78	94.444	ENSAPEG00000011132	srrm4	63	94.444	Amphiprion_percula
ENSMZEG00005021733	srrm4	98	68.397	ENSATEG00000005330	srrm4	99	68.919	Anabas_testudineus
ENSMZEG00005021733	srrm4	100	100.000	ENSACLG00000023532	srrm4	100	100.000	Astatotilapia_calliptera
ENSMZEG00005021733	srrm4	96	52.765	ENSCSEG00000007689	-	88	51.163	Cynoglossus_semilaevis
ENSMZEG00005021733	srrm4	57	51.373	ENSELUG00000004986	srrm4	62	49.679	Esox_lucius
ENSMZEG00005021733	srrm4	76	68.155	ENSFHEG00000005091	srrm4	86	66.369	Fundulus_heteroclitus
ENSMZEG00005021733	srrm4	64	46.926	ENSGMOG00000006714	srrm4	56	50.174	Gadus_morhua
ENSMZEG00005021733	srrm4	98	57.353	ENSGAFG00000006706	srrm4	73	61.290	Gambusia_affinis
ENSMZEG00005021733	srrm4	98	68.514	ENSMAMG00000004280	srrm4	98	66.741	Mastacembelus_armatus
ENSMZEG00005021733	srrm4	98	63.736	ENSMMOG00000000228	srrm4	98	60.879	Mola_mola
ENSMZEG00005021733	srrm4	100	87.629	ENSNBRG00000015313	srrm4	100	87.629	Neolamprologus_brichardi
ENSMZEG00005021733	srrm4	75	85.714	ENSONIG00000010552	srrm4	70	86.517	Oreochromis_niloticus
ENSMZEG00005021733	srrm4	78	76.471	ENSORLG00020009749	srrm4	93	50.321	Oryzias_latipes_hni
ENSMZEG00005021733	srrm4	98	54.462	ENSPMGG00000008387	srrm4	61	56.272	Periophthalmus_magnuspinnatus
ENSMZEG00005021733	srrm4	98	62.719	ENSPLAG00000002006	srrm4	79	60.231	Poecilia_latipinna
ENSMZEG00005021733	srrm4	98	62.838	ENSPMEG00000017802	srrm4	99	57.011	Poecilia_mexicana
ENSMZEG00005021733	srrm4	78	89.062	ENSPREG00000004567	srrm4	83	84.615	Poecilia_reticulata
ENSMZEG00005021733	srrm4	100	95.787	ENSPNYG00000007785	srrm4	100	95.787	Pundamilia_nyererei
ENSMZEG00005021733	srrm4	98	59.170	ENSSMAG00000012257	srrm4	99	59.170	Scophthalmus_maximus
ENSMZEG00005021733	srrm4	98	71.274	ENSSDUG00000017519	srrm4	99	71.137	Seriola_dumerili
ENSMZEG00005021733	srrm4	98	68.547	ENSSLDG00000015130	srrm4	77	75.862	Seriola_lalandi_dorsalis
ENSMZEG00005021733	srrm4	99	74.526	ENSSPAG00000016190	srrm4	99	77.193	Stegastes_partitus