EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005021778 (Gene tree)
Gene ID: 101463598
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2690 bases
Position: chrLG16:11779042-11781731
Accession: 101463598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005029210	MMR_HSR1	PF01926.23	9.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005030128	-	1556	XM_004568019	ENSMZEP00005029210	234 (aa)	XP_004568076	UPI00022B3F53

Gene Model

Click here to download ENSMZEG00005021778's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005021778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005021778	zgc:101559	100	89.744	ENSAPOG00000007503	zgc:101559	100	89.744	Acanthochromis_polyacanthus
ENSMZEG00005021778	zgc:101559	90	95.238	ENSACIG00000021459	zgc:101559	92	95.238	Amphilophus_citrinellus
ENSMZEG00005021778	zgc:101559	100	89.744	ENSAOCG00000024675	zgc:101559	100	89.744	Amphiprion_ocellaris
ENSMZEG00005021778	zgc:101559	100	89.744	ENSAPEG00000005176	zgc:101559	100	89.744	Amphiprion_percula
ENSMZEG00005021778	zgc:101559	100	88.034	ENSATEG00000007761	zgc:101559	100	88.034	Anabas_testudineus
ENSMZEG00005021778	zgc:101559	98	99.130	ENSACLG00000027006	zgc:101559	97	99.130	Astatotilapia_calliptera
ENSMZEG00005021778	zgc:101559	92	77.828	ENSAMXG00000040460	zgc:101559	88	77.828	Astyanax_mexicanus
ENSMZEG00005021778	zgc:101559	100	81.197	ENSCSEG00000006243	zgc:101559	100	81.197	Cynoglossus_semilaevis
ENSMZEG00005021778	zgc:101559	100	85.043	ENSCVAG00000019227	zgc:101559	100	85.043	Cyprinodon_variegatus
ENSMZEG00005021778	zgc:101559	100	76.596	ENSDARG00000003257	zgc:101559	100	76.596	Danio_rerio
ENSMZEG00005021778	zgc:101559	100	84.615	ENSFHEG00000011483	zgc:101559	100	84.615	Fundulus_heteroclitus
ENSMZEG00005021778	zgc:101559	91	83.099	ENSGMOG00000011665	zgc:101559	100	83.099	Gadus_morhua
ENSMZEG00005021778	zgc:101559	100	82.906	ENSGAFG00000021202	zgc:101559	100	82.906	Gambusia_affinis
ENSMZEG00005021778	zgc:101559	91	85.915	ENSGACG00000001725	zgc:101559	91	85.915	Gasterosteus_aculeatus
ENSMZEG00005021778	zgc:101559	100	100.000	ENSHBUG00000007827	zgc:101559	100	100.000	Haplochromis_burtoni
ENSMZEG00005021778	zgc:101559	100	76.695	ENSHCOG00000009133	zgc:101559	100	78.151	Hippocampus_comes
ENSMZEG00005021778	zgc:101559	100	70.085	ENSIPUG00000022394	zgc:101559	100	70.085	Ictalurus_punctatus
ENSMZEG00005021778	zgc:101559	100	82.553	ENSKMAG00000002862	zgc:101559	100	82.553	Kryptolebias_marmoratus
ENSMZEG00005021778	zgc:101559	100	89.316	ENSLBEG00000025798	zgc:101559	100	89.316	Labrus_bergylta
ENSMZEG00005021778	zgc:101559	86	67.164	ENSLACG00000011557	zgc:101559	87	67.164	Latimeria_chalumnae
ENSMZEG00005021778	zgc:101559	100	70.513	ENSLOCG00000005904	zgc:101559	99	70.513	Lepisosteus_oculatus
ENSMZEG00005021778	zgc:101559	100	89.744	ENSMAMG00000017431	zgc:101559	100	89.744	Mastacembelus_armatus
ENSMZEG00005021778	zgc:101559	100	84.188	ENSMMOG00000019779	zgc:101559	100	84.188	Mola_mola
ENSMZEG00005021778	zgc:101559	100	84.615	ENSMALG00000003712	zgc:101559	100	84.615	Monopterus_albus
ENSMZEG00005021778	zgc:101559	100	99.145	ENSNBRG00000002684	zgc:101559	100	99.145	Neolamprologus_brichardi
ENSMZEG00005021778	zgc:101559	100	100.000	ENSONIG00000006715	-	100	100.000	Oreochromis_niloticus
ENSMZEG00005021778	zgc:101559	100	83.333	ENSORLG00000030642	zgc:101559	100	83.333	Oryzias_latipes
ENSMZEG00005021778	zgc:101559	100	82.479	ENSORLG00020012685	zgc:101559	100	82.479	Oryzias_latipes_hni
ENSMZEG00005021778	zgc:101559	100	82.906	ENSORLG00015016047	zgc:101559	100	82.906	Oryzias_latipes_hsok
ENSMZEG00005021778	zgc:101559	100	85.043	ENSOMEG00000013128	zgc:101559	100	85.043	Oryzias_melastigma
ENSMZEG00005021778	zgc:101559	96	71.429	ENSPKIG00000013397	zgc:101559	94	71.429	Paramormyrops_kingsleyae
ENSMZEG00005021778	zgc:101559	100	85.043	ENSPFOG00000009101	-	100	85.043	Poecilia_formosa
ENSMZEG00005021778	zgc:101559	100	85.043	ENSPLAG00000020627	zgc:101559	100	85.043	Poecilia_latipinna
ENSMZEG00005021778	zgc:101559	100	85.043	ENSPMEG00000010152	zgc:101559	100	85.043	Poecilia_mexicana
ENSMZEG00005021778	zgc:101559	100	84.615	ENSPREG00000007017	zgc:101559	100	84.615	Poecilia_reticulata
ENSMZEG00005021778	zgc:101559	100	100.000	ENSPNYG00000012922	zgc:101559	100	100.000	Pundamilia_nyererei
ENSMZEG00005021778	zgc:101559	99	75.536	ENSPNAG00000017856	zgc:101559	100	75.536	Pygocentrus_nattereri
ENSMZEG00005021778	zgc:101559	99	69.528	ENSSFOG00015006175	zgc:101559	100	69.528	Scleropages_formosus
ENSMZEG00005021778	zgc:101559	99	83.691	ENSSMAG00000002229	zgc:101559	99	83.691	Scophthalmus_maximus
ENSMZEG00005021778	zgc:101559	100	90.598	ENSSDUG00000008151	zgc:101559	100	90.598	Seriola_dumerili
ENSMZEG00005021778	zgc:101559	100	90.598	ENSSLDG00000019214	zgc:101559	100	90.598	Seriola_lalandi_dorsalis
ENSMZEG00005021778	zgc:101559	100	91.453	ENSSPAG00000006404	zgc:101559	100	91.453	Stegastes_partitus
ENSMZEG00005021778	zgc:101559	100	81.624	ENSTRUG00000009903	zgc:101559	100	81.624	Takifugu_rubripes
ENSMZEG00005021778	zgc:101559	93	82.028	ENSTNIG00000015000	zgc:101559	92	82.028	Tetraodon_nigroviridis
ENSMZEG00005021778	zgc:101559	100	84.615	ENSXCOG00000018683	zgc:101559	100	84.615	Xiphophorus_couchianus
ENSMZEG00005021778	zgc:101559	100	84.615	ENSXMAG00000011171	zgc:101559	100	84.615	Xiphophorus_maculatus