EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 50100 bases
Position: chrAGTA05000532.1:28325-78424
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005029711	zf-C2H2	PF00096.26	2.9e-35	1	7
ENSMZEP00005029711	zf-C2H2	PF00096.26	2.9e-35	2	7
ENSMZEP00005029711	zf-C2H2	PF00096.26	2.9e-35	3	7
ENSMZEP00005029711	zf-C2H2	PF00096.26	2.9e-35	4	7
ENSMZEP00005029711	zf-C2H2	PF00096.26	2.9e-35	5	7
ENSMZEP00005029711	zf-C2H2	PF00096.26	2.9e-35	6	7
ENSMZEP00005029711	zf-C2H2	PF00096.26	2.9e-35	7	7
ENSMZEP00005029713	zf-C2H2	PF00096.26	2.2e-21	1	4
ENSMZEP00005029713	zf-C2H2	PF00096.26	2.2e-21	2	4
ENSMZEP00005029713	zf-C2H2	PF00096.26	2.2e-21	3	4
ENSMZEP00005029713	zf-C2H2	PF00096.26	2.2e-21	4	4
ENSMZEP00005029711	zf-met	PF12874.7	2.2e-10	1	1
ENSMZEP00005029713	zf-met	PF12874.7	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005030645	-	999	-	ENSMZEP00005029711	332 (aa)	-	-
ENSMZET00005030647	-	474	-	ENSMZEP00005029713	157 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005022161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022161	-	88	75.472	ENSACIG00000008886	znf1164	90	64.881	Amphilophus_citrinellus
ENSMZEG00005022161	-	88	37.838	ENSACIG00000000360	si:ch211-241b2.1	87	37.838	Amphilophus_citrinellus
ENSMZEG00005022161	-	97	31.579	ENSACIG00000007882	-	89	35.354	Amphilophus_citrinellus
ENSMZEG00005022161	-	89	37.857	ENSAOCG00000021565	-	52	34.591	Amphiprion_ocellaris
ENSMZEG00005022161	-	90	34.066	ENSATEG00000008683	si:ch211-241b2.1	96	32.472	Anabas_testudineus
ENSMZEG00005022161	-	94	35.088	ENSATEG00000008667	-	79	34.848	Anabas_testudineus
ENSMZEG00005022161	-	95	42.857	ENSACLG00000024670	-	72	36.190	Astatotilapia_calliptera
ENSMZEG00005022161	-	89	83.529	ENSACLG00000017449	-	58	83.529	Astatotilapia_calliptera
ENSMZEG00005022161	-	79	75.610	ENSACLG00000000521	-	95	75.610	Astatotilapia_calliptera
ENSMZEG00005022161	-	96	37.313	ENSAMXG00000041650	-	84	44.099	Astyanax_mexicanus
ENSMZEG00005022161	-	96	41.447	ENSAMXG00000043291	-	75	40.800	Astyanax_mexicanus
ENSMZEG00005022161	-	90	38.346	ENSAMXG00000029660	-	51	38.346	Astyanax_mexicanus
ENSMZEG00005022161	-	88	34.444	ENSCSEG00000015585	-	75	32.500	Cynoglossus_semilaevis
ENSMZEG00005022161	-	97	41.007	ENSDARG00000099890	CU207221.2	98	40.244	Danio_rerio
ENSMZEG00005022161	-	79	40.996	ENSDARG00000097521	si:dkey-111k8.5	87	38.697	Danio_rerio
ENSMZEG00005022161	-	79	38.819	ENSDARG00000116765	zgc:162962	91	37.857	Danio_rerio
ENSMZEG00005022161	-	90	41.860	ENSDARG00000053165	zgc:113377	79	43.137	Danio_rerio
ENSMZEG00005022161	-	78	39.815	ENSDARG00000104065	znf1154	87	38.496	Danio_rerio
ENSMZEG00005022161	-	91	45.283	ENSDARG00000111899	zgc:171435	70	41.148	Danio_rerio
ENSMZEG00005022161	-	78	40.784	ENSDARG00000103530	zgc:113102	96	40.784	Danio_rerio
ENSMZEG00005022161	-	92	36.429	ENSDARG00000115326	znf1002	69	41.489	Danio_rerio
ENSMZEG00005022161	-	93	40.288	ENSDARG00000113011	zgc:113102	95	41.176	Danio_rerio
ENSMZEG00005022161	-	95	40.870	ENSDARG00000115857	znf1001	94	40.870	Danio_rerio
ENSMZEG00005022161	-	80	39.768	ENSDARG00000094736	znf1157	83	44.444	Danio_rerio
ENSMZEG00005022161	-	91	40.714	ENSDARG00000111614	znf1183	81	39.785	Danio_rerio
ENSMZEG00005022161	-	78	40.084	ENSDARG00000103777	znf1001	98	40.084	Danio_rerio
ENSMZEG00005022161	-	78	40.000	ENSDARG00000099618	si:dkey-1b17.6	92	40.000	Danio_rerio
ENSMZEG00005022161	-	78	40.996	ENSDARG00000105056	znf45l	94	39.506	Danio_rerio
ENSMZEG00005022161	-	90	40.288	ENSDARG00000100882	znf1154	75	41.379	Danio_rerio
ENSMZEG00005022161	-	90	38.750	ENSDARG00000103827	znf1144	99	52.941	Danio_rerio
ENSMZEG00005022161	-	94	40.288	ENSDARG00000099731	CABZ01066719.1	95	40.288	Danio_rerio
ENSMZEG00005022161	-	78	40.392	ENSDARG00000098923	zgc:173577	96	40.392	Danio_rerio
ENSMZEG00005022161	-	78	40.331	ENSDARG00000071833	znf1162	83	43.275	Danio_rerio
ENSMZEG00005022161	-	90	39.370	ENSDARG00000100361	znf1174	72	40.860	Danio_rerio
ENSMZEG00005022161	-	78	40.083	ENSDARG00000106565	CABZ01066720.1	88	49.020	Danio_rerio
ENSMZEG00005022161	-	78	39.600	ENSDARG00000098248	CABZ01081730.1	90	40.351	Danio_rerio
ENSMZEG00005022161	-	78	43.411	ENSDARG00000109703	FO834825.1	80	43.860	Danio_rerio
ENSMZEG00005022161	-	78	40.088	ENSDARG00000078814	si:dkey-34m19.3	77	40.088	Danio_rerio
ENSMZEG00005022161	-	95	40.870	ENSDARG00000102401	znf1001	94	40.714	Danio_rerio
ENSMZEG00005022161	-	78	40.088	ENSDARG00000099172	BX000701.1	87	40.088	Danio_rerio
ENSMZEG00005022161	-	91	39.768	ENSDARG00000101694	znf1184	81	39.768	Danio_rerio
ENSMZEG00005022161	-	78	41.036	ENSDARG00000105074	BX000701.2	93	45.570	Danio_rerio
ENSMZEG00005022161	-	89	49.020	ENSDARG00000088507	znf982	80	42.365	Danio_rerio
ENSMZEG00005022161	-	78	39.847	ENSDARG00000100803	zgc:173517	90	39.847	Danio_rerio
ENSMZEG00005022161	-	89	37.956	ENSEBUG00000015073	-	84	37.179	Eptatretus_burgeri
ENSMZEG00005022161	-	97	47.273	ENSFHEG00000018209	-	67	39.744	Fundulus_heteroclitus
ENSMZEG00005022161	-	89	36.879	ENSFHEG00000018009	-	51	37.705	Fundulus_heteroclitus
ENSMZEG00005022161	-	88	37.410	ENSFHEG00000013152	-	63	37.410	Fundulus_heteroclitus
ENSMZEG00005022161	-	94	36.641	ENSFHEG00000014023	-	51	40.506	Fundulus_heteroclitus
ENSMZEG00005022161	-	94	40.000	ENSHBUG00000018916	-	61	37.186	Haplochromis_burtoni
ENSMZEG00005022161	-	90	37.857	ENSHBUG00000009953	-	70	35.319	Haplochromis_burtoni
ENSMZEG00005022161	-	92	41.558	ENSKMAG00000009563	-	81	42.202	Kryptolebias_marmoratus
ENSMZEG00005022161	-	88	39.716	ENSMAMG00000014743	-	56	33.603	Mastacembelus_armatus
ENSMZEG00005022161	-	88	36.232	ENSMZEG00005025729	-	91	36.232	Maylandia_zebra
ENSMZEG00005022161	-	94	37.931	ENSMZEG00005007426	-	63	38.462	Maylandia_zebra
ENSMZEG00005022161	-	96	34.028	ENSMZEG00005027943	-	96	39.175	Maylandia_zebra
ENSMZEG00005022161	-	89	49.045	ENSMZEG00005005162	-	82	52.941	Maylandia_zebra
ENSMZEG00005022161	-	90	78.652	ENSMZEG00005025568	-	81	78.652	Maylandia_zebra
ENSMZEG00005022161	-	94	38.129	ENSMZEG00005027793	-	75	38.129	Maylandia_zebra
ENSMZEG00005022161	-	92	40.000	ENSMZEG00005026470	-	57	40.000	Maylandia_zebra
ENSMZEG00005022161	-	95	37.956	ENSMZEG00005021426	-	86	43.114	Maylandia_zebra
ENSMZEG00005022161	-	99	35.455	ENSMALG00000008638	-	58	34.524	Monopterus_albus
ENSMZEG00005022161	-	89	35.971	ENSMALG00000018074	-	58	40.654	Monopterus_albus
ENSMZEG00005022161	-	93	37.410	ENSNBRG00000000577	-	77	39.716	Neolamprologus_brichardi
ENSMZEG00005022161	-	88	39.362	ENSONIG00000013908	-	100	44.615	Oreochromis_niloticus
ENSMZEG00005022161	-	81	53.731	ENSONIG00000006585	-	99	53.731	Oreochromis_niloticus
ENSMZEG00005022161	-	96	66.667	ENSONIG00000003363	-	100	66.667	Oreochromis_niloticus
ENSMZEG00005022161	-	89	38.372	ENSPKIG00000018633	-	51	35.429	Paramormyrops_kingsleyae
ENSMZEG00005022161	-	89	42.446	ENSPKIG00000019848	-	50	39.300	Paramormyrops_kingsleyae
ENSMZEG00005022161	-	99	33.594	ENSPMGG00000001558	znf1174	53	35.065	Periophthalmus_magnuspinnatus
ENSMZEG00005022161	-	94	34.783	ENSPFOG00000011766	-	99	31.799	Poecilia_formosa
ENSMZEG00005022161	-	91	41.509	ENSPFOG00000001144	-	100	36.187	Poecilia_formosa
ENSMZEG00005022161	-	97	40.602	ENSPLAG00000016561	zgc:113348	98	37.759	Poecilia_latipinna
ENSMZEG00005022161	-	90	43.396	ENSPMEG00000007573	zgc:113343	67	38.261	Poecilia_mexicana
ENSMZEG00005022161	-	97	35.971	ENSPREG00000014105	-	89	35.961	Poecilia_reticulata
ENSMZEG00005022161	-	90	37.391	ENSPREG00000001514	zgc:113343	62	38.298	Poecilia_reticulata
ENSMZEG00005022161	-	94	31.690	ENSPREG00000005538	-	79	35.000	Poecilia_reticulata
ENSMZEG00005022161	-	90	82.558	ENSPNYG00000024183	zgc:173577	99	82.558	Pundamilia_nyererei
ENSMZEG00005022161	-	94	47.170	ENSSDUG00000008682	-	72	44.444	Seriola_dumerili
ENSMZEG00005022161	-	70	34.545	ENSSPAG00000009426	-	67	32.995	Stegastes_partitus
ENSMZEG00005022161	-	93	37.762	ENSSPAG00000006539	-	96	35.745	Stegastes_partitus
ENSMZEG00005022161	-	93	35.135	ENSSPAG00000013109	si:ch211-241b2.1	69	39.216	Stegastes_partitus
ENSMZEG00005022161	-	89	41.071	ENSTNIG00000000277	-	100	42.857	Tetraodon_nigroviridis
ENSMZEG00005022161	-	90	43.396	ENSXCOG00000017871	zgc:113343	64	37.872	Xiphophorus_couchianus
ENSMZEG00005022161	-	90	43.396	ENSXMAG00000019923	zgc:113343	64	38.261	Xiphophorus_maculatus