EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022256 (Gene tree)
Gene ID: 101471002
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 12137 bases
Position: chrLG7:11866171-11878307
Accession: 101471002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005029839	MMR_HSR1	PF01926.23	5.4e-06	1	1
ENSMZEP00005029845	MMR_HSR1	PF01926.23	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005030785	-	1902	-	ENSMZEP00005029845	633 (aa)	-	-
ENSMZET00005030779	-	4010	XM_004553197	ENSMZEP00005029839	663 (aa)	XP_004553254	-

Gene Model

Click here to download ENSMZEG00005022256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022256	zgc:162879	99	81.915	ENSAPOG00000008539	zgc:162879	99	81.915	Acanthochromis_polyacanthus
ENSMZEG00005022256	zgc:162879	100	89.608	ENSACIG00000023717	zgc:162879	100	89.608	Amphilophus_citrinellus
ENSMZEG00005022256	zgc:162879	85	78.975	ENSAOCG00000006210	zgc:162879	88	78.975	Amphiprion_ocellaris
ENSMZEG00005022256	zgc:162879	99	82.067	ENSAPEG00000017489	zgc:162879	99	82.067	Amphiprion_percula
ENSMZEG00005022256	zgc:162879	100	83.886	ENSATEG00000006102	zgc:162879	100	83.886	Anabas_testudineus
ENSMZEG00005022256	zgc:162879	100	99.849	ENSACLG00000021066	zgc:162879	97	99.849	Astatotilapia_calliptera
ENSMZEG00005022256	zgc:162879	100	62.500	ENSAMXG00000007430	zgc:162879	100	62.500	Astyanax_mexicanus
ENSMZEG00005022256	zgc:162879	85	61.972	ENSCSEG00000013699	zgc:162879	92	61.972	Cynoglossus_semilaevis
ENSMZEG00005022256	zgc:162879	99	73.454	ENSCVAG00000014510	zgc:162879	99	73.454	Cyprinodon_variegatus
ENSMZEG00005022256	zgc:162879	100	61.862	ENSDARG00000074163	zgc:162879	100	61.862	Danio_rerio
ENSMZEG00005022256	zgc:162879	99	58.268	ENSELUG00000019483	zgc:162879	97	64.638	Esox_lucius
ENSMZEG00005022256	zgc:162879	76	69.763	ENSFHEG00000022549	zgc:162879	100	69.763	Fundulus_heteroclitus
ENSMZEG00005022256	zgc:162879	100	71.988	ENSGAFG00000001313	zgc:162879	100	71.988	Gambusia_affinis
ENSMZEG00005022256	zgc:162879	100	74.459	ENSGACG00000010798	zgc:162879	99	74.026	Gasterosteus_aculeatus
ENSMZEG00005022256	zgc:162879	100	99.548	ENSHBUG00000016335	zgc:162879	100	99.548	Haplochromis_burtoni
ENSMZEG00005022256	zgc:162879	100	52.411	ENSHCOG00000012026	zgc:162879	99	58.292	Hippocampus_comes
ENSMZEG00005022256	zgc:162879	100	67.620	ENSKMAG00000016246	zgc:162879	100	67.018	Kryptolebias_marmoratus
ENSMZEG00005022256	zgc:162879	99	76.205	ENSLBEG00000006690	zgc:162879	100	76.205	Labrus_bergylta
ENSMZEG00005022256	zgc:162879	96	56.678	ENSLACG00000014082	-	88	56.352	Latimeria_chalumnae
ENSMZEG00005022256	zgc:162879	99	58.754	ENSLOCG00000014347	zgc:162879	98	58.754	Lepisosteus_oculatus
ENSMZEG00005022256	zgc:162879	100	79.638	ENSMAMG00000008875	zgc:162879	100	79.638	Mastacembelus_armatus
ENSMZEG00005022256	zgc:162879	100	88.540	ENSNBRG00000020110	zgc:162879	100	88.540	Neolamprologus_brichardi
ENSMZEG00005022256	zgc:162879	99	90.571	ENSONIG00000015165	zgc:162879	100	90.571	Oreochromis_niloticus
ENSMZEG00005022256	zgc:162879	99	68.373	ENSORLG00015017960	zgc:162879	99	68.373	Oryzias_latipes_hsok
ENSMZEG00005022256	zgc:162879	100	57.143	ENSPKIG00000020661	zgc:162879	100	56.992	Paramormyrops_kingsleyae
ENSMZEG00005022256	zgc:162879	100	70.890	ENSPFOG00000006354	zgc:162879	99	70.890	Poecilia_formosa
ENSMZEG00005022256	zgc:162879	100	70.739	ENSPLAG00000020643	zgc:162879	99	70.739	Poecilia_latipinna
ENSMZEG00005022256	zgc:162879	100	70.437	ENSPMEG00000014713	zgc:162879	100	70.437	Poecilia_mexicana
ENSMZEG00005022256	zgc:162879	100	96.840	ENSPNYG00000010530	zgc:162879	100	96.840	Pundamilia_nyererei
ENSMZEG00005022256	zgc:162879	100	61.516	ENSPNAG00000012022	zgc:162879	100	61.516	Pygocentrus_nattereri
ENSMZEG00005022256	zgc:162879	91	47.680	ENSSFOG00015023774	zgc:162879	97	47.756	Scleropages_formosus
ENSMZEG00005022256	zgc:162879	100	76.355	ENSSMAG00000001513	zgc:162879	99	76.508	Scophthalmus_maximus
ENSMZEG00005022256	zgc:162879	100	84.187	ENSSDUG00000011478	zgc:162879	100	84.187	Seriola_dumerili
ENSMZEG00005022256	zgc:162879	100	84.036	ENSSLDG00000000877	zgc:162879	100	84.036	Seriola_lalandi_dorsalis
ENSMZEG00005022256	zgc:162879	99	75.684	ENSSPAG00000010598	zgc:162879	99	75.684	Stegastes_partitus
ENSMZEG00005022256	zgc:162879	99	69.034	ENSTNIG00000019239	zgc:162879	99	69.034	Tetraodon_nigroviridis
ENSMZEG00005022256	zgc:162879	99	41.725	ENSXETG00000015491	rasef	98	40.694	Xenopus_tropicalis
ENSMZEG00005022256	zgc:162879	77	67.126	ENSXCOG00000020244	zgc:162879	100	67.126	Xiphophorus_couchianus
ENSMZEG00005022256	zgc:162879	100	72.440	ENSXMAG00000002846	zgc:162879	100	72.440	Xiphophorus_maculatus