EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022335 (Gene tree)
Gene ID: 101476135
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: mRNA decay activator protein ZFP36L2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 2417 bases
Position: chrAGTA05000045.1:223321-225737
Accession: 101476135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005029954	zf-CCCH	PF00642.24	8.1e-30	1	4
ENSMZEP00005029954	zf-CCCH	PF00642.24	8.1e-30	2	4
ENSMZEP00005029954	zf-CCCH	PF00642.24	8.1e-30	3	4
ENSMZEP00005029954	zf-CCCH	PF00642.24	8.1e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005030897	-	1303	XM_004574310	ENSMZEP00005029954	295 (aa)	XP_004574367	UPI0003297754

Gene Model

Click here to download ENSMZEG00005022335's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04114	Oocyte meiosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022335's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022335	cth1	89	66.176	ENSAPOG00000012552	cth1	95	66.300	Acanthochromis_polyacanthus
ENSMZEG00005022335	cth1	88	75.273	ENSACIG00000016026	cth1	99	74.204	Amphilophus_citrinellus
ENSMZEG00005022335	cth1	100	67.203	ENSAOCG00000001644	cth1	100	66.559	Amphiprion_ocellaris
ENSMZEG00005022335	cth1	100	67.203	ENSAPEG00000008930	cth1	100	66.559	Amphiprion_percula
ENSMZEG00005022335	cth1	99	63.830	ENSATEG00000002281	cth1	97	64.087	Anabas_testudineus
ENSMZEG00005022335	cth1	94	99.639	ENSACLG00000015353	cth1	100	99.639	Astatotilapia_calliptera
ENSMZEG00005022335	cth1	96	55.911	ENSAMXG00000025717	cth1	68	63.964	Astyanax_mexicanus
ENSMZEG00005022335	cth1	100	62.617	ENSCSEG00000014617	cth1	100	61.994	Cynoglossus_semilaevis
ENSMZEG00005022335	cth1	100	55.663	ENSCVAG00000001680	cth1	65	56.579	Cyprinodon_variegatus
ENSMZEG00005022335	cth1	90	58.703	ENSDARG00000057328	cth1	98	58.675	Danio_rerio
ENSMZEG00005022335	cth1	99	54.491	ENSELUG00000012738	cth1	69	60.086	Esox_lucius
ENSMZEG00005022335	cth1	100	56.329	ENSFHEG00000022665	cth1	100	55.591	Fundulus_heteroclitus
ENSMZEG00005022335	cth1	99	60.194	ENSGMOG00000007360	cth1	100	58.958	Gadus_morhua
ENSMZEG00005022335	cth1	100	56.000	ENSGAFG00000019288	cth1	100	56.250	Gambusia_affinis
ENSMZEG00005022335	cth1	99	62.295	ENSGACG00000000802	cth1	99	62.046	Gasterosteus_aculeatus
ENSMZEG00005022335	cth1	100	98.305	ENSHBUG00000014400	cth1	100	98.305	Haplochromis_burtoni
ENSMZEG00005022335	cth1	97	53.793	ENSHCOG00000010276	cth1	97	53.103	Hippocampus_comes
ENSMZEG00005022335	cth1	96	57.878	ENSIPUG00000018040	cth1	95	57.605	Ictalurus_punctatus
ENSMZEG00005022335	cth1	100	60.265	ENSKMAG00000005944	cth1	100	60.265	Kryptolebias_marmoratus
ENSMZEG00005022335	cth1	100	64.486	ENSLBEG00000019253	cth1	100	64.062	Labrus_bergylta
ENSMZEG00005022335	cth1	79	51.196	ENSLOCG00000002047	cth1	98	51.196	Lepisosteus_oculatus
ENSMZEG00005022335	cth1	80	59.671	ENSMAMG00000001525	cth1	65	59.671	Mastacembelus_armatus
ENSMZEG00005022335	cth1	95	65.461	ENSMMOG00000020518	cth1	100	64.356	Mola_mola
ENSMZEG00005022335	cth1	100	49.072	ENSMALG00000020738	cth1	58	65.596	Monopterus_albus
ENSMZEG00005022335	cth1	88	85.441	ENSNBRG00000022789	cth1	88	85.441	Neolamprologus_brichardi
ENSMZEG00005022335	cth1	99	88.333	ENSONIG00000021318	cth1	99	88.333	Oreochromis_niloticus
ENSMZEG00005022335	cth1	100	56.667	ENSORLG00000022847	cth1	100	57.667	Oryzias_latipes
ENSMZEG00005022335	cth1	100	57.426	ENSORLG00020011979	cth1	100	58.140	Oryzias_latipes_hni
ENSMZEG00005022335	cth1	100	57.096	ENSORLG00015013084	cth1	100	57.667	Oryzias_latipes_hsok
ENSMZEG00005022335	cth1	91	60.595	ENSOMEG00000005809	cth1	79	61.905	Oryzias_melastigma
ENSMZEG00005022335	cth1	97	50.943	ENSPKIG00000015883	cth1	95	50.314	Paramormyrops_kingsleyae
ENSMZEG00005022335	cth1	99	61.491	ENSPMGG00000004275	cth1	100	60.248	Periophthalmus_magnuspinnatus
ENSMZEG00005022335	cth1	100	56.151	ENSPFOG00000013583	cth1	94	57.962	Poecilia_formosa
ENSMZEG00005022335	cth1	100	56.467	ENSPLAG00000018158	cth1	94	58.280	Poecilia_latipinna
ENSMZEG00005022335	cth1	100	56.289	ENSPMEG00000005744	cth1	100	58.095	Poecilia_mexicana
ENSMZEG00005022335	cth1	99	57.097	ENSPREG00000004099	cth1	100	58.333	Poecilia_reticulata
ENSMZEG00005022335	cth1	91	88.060	ENSPNYG00000016705	cth1	93	88.060	Pundamilia_nyererei
ENSMZEG00005022335	cth1	98	55.385	ENSPNAG00000013147	cth1	99	54.103	Pygocentrus_nattereri
ENSMZEG00005022335	cth1	86	54.874	ENSSFOG00015017190	cth1	62	62.437	Scleropages_formosus
ENSMZEG00005022335	cth1	100	60.748	ENSSMAG00000007977	cth1	100	64.486	Scophthalmus_maximus
ENSMZEG00005022335	cth1	100	63.142	ENSSDUG00000004321	cth1	100	62.805	Seriola_dumerili
ENSMZEG00005022335	cth1	100	63.253	ENSSLDG00000004516	-	100	63.830	Seriola_lalandi_dorsalis
ENSMZEG00005022335	cth1	100	63.554	ENSSLDG00000012760	cth1	100	64.134	Seriola_lalandi_dorsalis
ENSMZEG00005022335	cth1	99	63.636	ENSSLDG00000010023	-	99	64.220	Seriola_lalandi_dorsalis
ENSMZEG00005022335	cth1	100	64.762	ENSSPAG00000018659	cth1	100	63.492	Stegastes_partitus
ENSMZEG00005022335	cth1	99	59.119	ENSTRUG00000012770	cth1	99	61.321	Takifugu_rubripes
ENSMZEG00005022335	cth1	99	60.692	ENSTNIG00000000740	cth1	99	59.748	Tetraodon_nigroviridis
ENSMZEG00005022335	cth1	82	59.671	ENSXCOG00000003710	cth1	82	57.642	Xiphophorus_couchianus
ENSMZEG00005022335	cth1	100	56.550	ENSXMAG00000023885	cth1	100	56.230	Xiphophorus_maculatus