EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022345 (Gene tree)
Gene ID: 101478886
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 10436 bases
Position: chrAGTA05000026.1:1083696-1094131
Accession: 101478886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005029969	HAT	PF02184.16	1.5e-37	1	2
ENSMZEP00005029969	HAT	PF02184.16	1.5e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005030912	-	5545	XM_004561051	ENSMZEP00005029969	752 (aa)	XP_004561108	UPI000D2FD40D

Gene Model

Click here to download ENSMZEG00005022345's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022345	crnkl1	90	86.854	ENSG00000101343	CRNKL1	99	86.854	Homo_sapiens
ENSMZEG00005022345	crnkl1	100	89.633	ENSAPOG00000009705	crnkl1	99	93.003	Acanthochromis_polyacanthus
ENSMZEG00005022345	crnkl1	89	87.649	ENSAMEG00000000270	CRNKL1	82	87.740	Ailuropoda_melanoleuca
ENSMZEG00005022345	crnkl1	95	92.050	ENSACIG00000015267	crnkl1	100	90.728	Amphilophus_citrinellus
ENSMZEG00005022345	crnkl1	100	89.815	ENSAOCG00000021964	crnkl1	100	90.476	Amphiprion_ocellaris
ENSMZEG00005022345	crnkl1	100	90.186	ENSAPEG00000015041	crnkl1	100	90.584	Amphiprion_percula
ENSMZEG00005022345	crnkl1	96	90.556	ENSATEG00000001068	crnkl1	100	87.451	Anabas_testudineus
ENSMZEG00005022345	crnkl1	90	85.103	ENSAPLG00000013105	CRNKL1	99	85.103	Anas_platyrhynchos
ENSMZEG00005022345	crnkl1	91	87.812	ENSACAG00000005284	CRNKL1	99	87.812	Anolis_carolinensis
ENSMZEG00005022345	crnkl1	84	87.619	ENSANAG00000024889	CRNKL1	99	87.619	Aotus_nancymaae
ENSMZEG00005022345	crnkl1	100	99.735	ENSACLG00000010813	crnkl1	100	99.735	Astatotilapia_calliptera
ENSMZEG00005022345	crnkl1	88	92.932	ENSAMXG00000018334	crnkl1	99	85.714	Astyanax_mexicanus
ENSMZEG00005022345	crnkl1	91	86.522	ENSBTAG00000008472	CRNKL1	99	86.522	Bos_taurus
ENSMZEG00005022345	crnkl1	94	58.924	WBGene00019762	M03F8.3	98	58.189	Caenorhabditis_elegans
ENSMZEG00005022345	crnkl1	90	87.297	ENSCJAG00000005393	CRNKL1	99	87.297	Callithrix_jacchus
ENSMZEG00005022345	crnkl1	89	87.649	ENSCAFG00000005333	CRNKL1	93	87.740	Canis_familiaris
ENSMZEG00005022345	crnkl1	90	87.740	ENSCAFG00020027488	CRNKL1	99	87.740	Canis_lupus_dingo
ENSMZEG00005022345	crnkl1	91	85.362	ENSCHIG00000013171	CRNKL1	99	85.362	Capra_hircus
ENSMZEG00005022345	crnkl1	91	86.404	ENSTSYG00000004197	CRNKL1	99	86.404	Carlito_syrichta
ENSMZEG00005022345	crnkl1	82	84.355	ENSCAPG00000010501	CRNKL1	99	84.355	Cavia_aperea
ENSMZEG00005022345	crnkl1	90	86.558	ENSCPOG00000004418	CRNKL1	99	86.558	Cavia_porcellus
ENSMZEG00005022345	crnkl1	90	87.445	ENSCCAG00000027037	CRNKL1	99	87.445	Cebus_capucinus
ENSMZEG00005022345	crnkl1	90	87.001	ENSCATG00000034247	CRNKL1	99	87.001	Cercocebus_atys
ENSMZEG00005022345	crnkl1	90	87.297	ENSCLAG00000013859	CRNKL1	99	87.297	Chinchilla_lanigera
ENSMZEG00005022345	crnkl1	90	87.001	ENSCSAG00000011434	CRNKL1	99	87.001	Chlorocebus_sabaeus
ENSMZEG00005022345	crnkl1	89	86.905	ENSCHOG00000006371	CRNKL1	83	87.001	Choloepus_hoffmanni
ENSMZEG00005022345	crnkl1	90	88.201	ENSCPBG00000023501	CRNKL1	99	88.201	Chrysemys_picta_bellii
ENSMZEG00005022345	crnkl1	88	68.976	ENSCING00000002709	-	99	66.429	Ciona_intestinalis
ENSMZEG00005022345	crnkl1	90	87.001	ENSCANG00000038789	CRNKL1	99	87.001	Colobus_angolensis_palliatus
ENSMZEG00005022345	crnkl1	91	85.881	ENSCGRG00001000687	-	99	85.881	Cricetulus_griseus_chok1gshd
ENSMZEG00005022345	crnkl1	91	85.881	ENSCGRG00001001115	-	99	85.881	Cricetulus_griseus_chok1gshd
ENSMZEG00005022345	crnkl1	91	85.881	ENSCGRG00000007854	Crnkl1	99	85.881	Cricetulus_griseus_crigri
ENSMZEG00005022345	crnkl1	99	85.146	ENSCSEG00000005594	crnkl1	91	88.488	Cynoglossus_semilaevis
ENSMZEG00005022345	crnkl1	89	95.060	ENSCVAG00000015172	crnkl1	100	87.766	Cyprinodon_variegatus
ENSMZEG00005022345	crnkl1	97	86.202	ENSDARG00000007901	crnkl1	97	85.889	Danio_rerio
ENSMZEG00005022345	crnkl1	90	87.445	ENSDNOG00000016226	CRNKL1	94	87.445	Dasypus_novemcinctus
ENSMZEG00005022345	crnkl1	88	81.504	ENSDORG00000023724	-	98	81.504	Dipodomys_ordii
ENSMZEG00005022345	crnkl1	90	85.652	ENSDORG00000000394	-	99	85.652	Dipodomys_ordii
ENSMZEG00005022345	crnkl1	89	80.660	ENSDORG00000030174	-	99	80.660	Dipodomys_ordii
ENSMZEG00005022345	crnkl1	90	68.521	FBgn0000377	crn	99	67.139	Drosophila_melanogaster
ENSMZEG00005022345	crnkl1	89	77.177	ENSETEG00000003711	CRNKL1	81	77.177	Echinops_telfairi
ENSMZEG00005022345	crnkl1	92	61.933	ENSEBUG00000013461	crnkl1	97	56.667	Eptatretus_burgeri
ENSMZEG00005022345	crnkl1	90	87.740	ENSEASG00005002072	CRNKL1	99	87.740	Equus_asinus_asinus
ENSMZEG00005022345	crnkl1	90	87.740	ENSECAG00000022215	CRNKL1	99	87.740	Equus_caballus
ENSMZEG00005022345	crnkl1	89	84.821	ENSEEUG00000000413	CRNKL1	91	84.934	Erinaceus_europaeus
ENSMZEG00005022345	crnkl1	89	90.705	ENSELUG00000015424	crnkl1	99	87.589	Esox_lucius
ENSMZEG00005022345	crnkl1	90	87.740	ENSFCAG00000000714	CRNKL1	99	87.740	Felis_catus
ENSMZEG00005022345	crnkl1	88	85.994	ENSFALG00000004611	CRNKL1	99	85.994	Ficedula_albicollis
ENSMZEG00005022345	crnkl1	90	87.297	ENSFDAG00000000604	CRNKL1	99	87.297	Fukomys_damarensis
ENSMZEG00005022345	crnkl1	100	86.104	ENSFHEG00000013163	crnkl1	98	87.500	Fundulus_heteroclitus
ENSMZEG00005022345	crnkl1	89	89.552	ENSGMOG00000007609	crnkl1	97	86.383	Gadus_morhua
ENSMZEG00005022345	crnkl1	90	87.758	ENSGALG00000008429	CRNKL1	99	87.758	Gallus_gallus
ENSMZEG00005022345	crnkl1	89	94.311	ENSGAFG00000014249	crnkl1	97	88.579	Gambusia_affinis
ENSMZEG00005022345	crnkl1	100	85.317	ENSGACG00000011852	crnkl1	100	85.601	Gasterosteus_aculeatus
ENSMZEG00005022345	crnkl1	86	86.574	ENSGAGG00000021233	CRNKL1	99	86.574	Gopherus_agassizii
ENSMZEG00005022345	crnkl1	90	86.854	ENSGGOG00000014176	CRNKL1	99	86.854	Gorilla_gorilla
ENSMZEG00005022345	crnkl1	100	98.810	ENSHBUG00000005246	crnkl1	100	98.810	Haplochromis_burtoni
ENSMZEG00005022345	crnkl1	90	87.297	ENSHGLG00000010856	CRNKL1	99	87.297	Heterocephalus_glaber_female
ENSMZEG00005022345	crnkl1	90	87.297	ENSHGLG00100011521	CRNKL1	99	87.297	Heterocephalus_glaber_male
ENSMZEG00005022345	crnkl1	89	90.105	ENSHCOG00000006420	crnkl1	99	88.099	Hippocampus_comes
ENSMZEG00005022345	crnkl1	84	72.913	ENSIPUG00000000315	-	99	72.913	Ictalurus_punctatus
ENSMZEG00005022345	crnkl1	90	87.573	ENSIPUG00000006751	crnkl1	98	85.977	Ictalurus_punctatus
ENSMZEG00005022345	crnkl1	88	77.677	ENSIPUG00000006836	-	97	77.744	Ictalurus_punctatus
ENSMZEG00005022345	crnkl1	90	87.740	ENSSTOG00000014747	CRNKL1	99	87.740	Ictidomys_tridecemlineatus
ENSMZEG00005022345	crnkl1	90	85.137	ENSJJAG00000016926	Crnkl1	99	85.137	Jaculus_jaculus
ENSMZEG00005022345	crnkl1	96	89.793	ENSKMAG00000003620	crnkl1	94	88.564	Kryptolebias_marmoratus
ENSMZEG00005022345	crnkl1	94	72.028	ENSLBEG00000003543	crnkl1	96	72.867	Labrus_bergylta
ENSMZEG00005022345	crnkl1	90	88.348	ENSLACG00000001129	CRNKL1	99	88.348	Latimeria_chalumnae
ENSMZEG00005022345	crnkl1	88	91.880	ENSLOCG00000016889	crnkl1	99	85.950	Lepisosteus_oculatus
ENSMZEG00005022345	crnkl1	90	86.431	ENSLAFG00000004512	CRNKL1	99	87.168	Loxodonta_africana
ENSMZEG00005022345	crnkl1	90	87.001	ENSMFAG00000039893	CRNKL1	99	87.001	Macaca_fascicularis
ENSMZEG00005022345	crnkl1	90	87.001	ENSMMUG00000007709	CRNKL1	99	87.001	Macaca_mulatta
ENSMZEG00005022345	crnkl1	90	87.001	ENSMNEG00000037490	CRNKL1	99	87.001	Macaca_nemestrina
ENSMZEG00005022345	crnkl1	90	87.001	ENSMLEG00000034885	CRNKL1	99	87.001	Mandrillus_leucophaeus
ENSMZEG00005022345	crnkl1	95	92.039	ENSMAMG00000008757	crnkl1	100	88.860	Mastacembelus_armatus
ENSMZEG00005022345	crnkl1	90	87.040	ENSMGAG00000003452	CRNKL1	93	87.040	Meleagris_gallopavo
ENSMZEG00005022345	crnkl1	91	85.881	ENSMAUG00000020764	Crnkl1	99	85.881	Mesocricetus_auratus
ENSMZEG00005022345	crnkl1	90	87.149	ENSMICG00000006048	CRNKL1	99	87.149	Microcebus_murinus
ENSMZEG00005022345	crnkl1	88	63.705	ENSMOCG00000004179	-	99	62.373	Microtus_ochrogaster
ENSMZEG00005022345	crnkl1	91	78.000	ENSMOCG00000000681	-	99	78.000	Microtus_ochrogaster
ENSMZEG00005022345	crnkl1	84	91.456	ENSMMOG00000017601	crnkl1	97	91.456	Mola_mola
ENSMZEG00005022345	crnkl1	90	80.412	ENSMODG00000010857	-	98	80.412	Monodelphis_domestica
ENSMZEG00005022345	crnkl1	89	85.333	ENSMODG00000005961	-	96	85.333	Monodelphis_domestica
ENSMZEG00005022345	crnkl1	95	68.134	ENSMALG00000011211	crnkl1	99	71.731	Monopterus_albus
ENSMZEG00005022345	crnkl1	91	86.172	MGP_CAROLIEiJ_G0024394	Crnkl1	99	86.172	Mus_caroli
ENSMZEG00005022345	crnkl1	91	86.172	ENSMUSG00000001767	Crnkl1	99	86.172	Mus_musculus
ENSMZEG00005022345	crnkl1	91	85.444	MGP_PahariEiJ_G0025838	Crnkl1	99	85.444	Mus_pahari
ENSMZEG00005022345	crnkl1	91	86.172	MGP_SPRETEiJ_G0025312	Crnkl1	99	86.172	Mus_spretus
ENSMZEG00005022345	crnkl1	90	87.740	ENSMPUG00000001226	CRNKL1	99	87.740	Mustela_putorius_furo
ENSMZEG00005022345	crnkl1	89	86.924	ENSMLUG00000016513	CRNKL1	88	87.021	Myotis_lucifugus
ENSMZEG00005022345	crnkl1	90	85.362	ENSNGAG00000023097	Crnkl1	99	85.362	Nannospalax_galili
ENSMZEG00005022345	crnkl1	100	98.419	ENSNBRG00000007867	crnkl1	100	98.419	Neolamprologus_brichardi
ENSMZEG00005022345	crnkl1	90	84.047	ENSNLEG00000009862	CRNKL1	99	84.047	Nomascus_leucogenys
ENSMZEG00005022345	crnkl1	90	81.563	ENSMEUG00000002361	-	98	81.563	Notamacropus_eugenii
ENSMZEG00005022345	crnkl1	87	88.172	ENSMEUG00000012167	-	97	88.172	Notamacropus_eugenii
ENSMZEG00005022345	crnkl1	78	60.271	ENSOPRG00000009242	-	61	60.271	Ochotona_princeps
ENSMZEG00005022345	crnkl1	90	86.854	ENSODEG00000012175	CRNKL1	99	86.854	Octodon_degus
ENSMZEG00005022345	crnkl1	100	98.021	ENSONIG00000018728	crnkl1	100	98.021	Oreochromis_niloticus
ENSMZEG00005022345	crnkl1	89	86.647	ENSOCUG00000015484	CRNKL1	82	87.334	Oryctolagus_cuniculus
ENSMZEG00005022345	crnkl1	100	86.587	ENSORLG00000017240	crnkl1	100	86.853	Oryzias_latipes
ENSMZEG00005022345	crnkl1	100	86.755	ENSORLG00020001742	crnkl1	100	87.020	Oryzias_latipes_hni
ENSMZEG00005022345	crnkl1	100	86.436	ENSORLG00015019564	crnkl1	100	86.835	Oryzias_latipes_hsok
ENSMZEG00005022345	crnkl1	100	88.048	ENSOMEG00000019895	crnkl1	100	88.313	Oryzias_melastigma
ENSMZEG00005022345	crnkl1	90	87.001	ENSOGAG00000011544	CRNKL1	99	87.001	Otolemur_garnettii
ENSMZEG00005022345	crnkl1	89	87.370	ENSOARG00000002150	CRNKL1	88	87.463	Ovis_aries
ENSMZEG00005022345	crnkl1	89	85.714	ENSPPAG00000027847	CRNKL1	82	85.820	Pan_paniscus
ENSMZEG00005022345	crnkl1	90	87.740	ENSPPRG00000001955	CRNKL1	99	87.740	Panthera_pardus
ENSMZEG00005022345	crnkl1	90	87.740	ENSPTIG00000007393	CRNKL1	99	87.740	Panthera_tigris_altaica
ENSMZEG00005022345	crnkl1	90	86.854	ENSPTRG00000030609	CRNKL1	99	86.854	Pan_troglodytes
ENSMZEG00005022345	crnkl1	90	87.001	ENSPANG00000017420	CRNKL1	99	87.001	Papio_anubis
ENSMZEG00005022345	crnkl1	88	85.886	ENSPKIG00000017093	crnkl1	98	78.864	Paramormyrops_kingsleyae
ENSMZEG00005022345	crnkl1	90	86.815	ENSPSIG00000012705	CRNKL1	98	86.815	Pelodiscus_sinensis
ENSMZEG00005022345	crnkl1	91	84.402	ENSPMGG00000006263	crnkl1	95	84.889	Periophthalmus_magnuspinnatus
ENSMZEG00005022345	crnkl1	91	86.172	ENSPEMG00000000073	-	99	86.172	Peromyscus_maniculatus_bairdii
ENSMZEG00005022345	crnkl1	90	83.136	ENSPMAG00000002250	crnkl1	99	81.977	Petromyzon_marinus
ENSMZEG00005022345	crnkl1	89	87.688	ENSPCIG00000025825	CRNKL1	93	87.688	Phascolarctos_cinereus
ENSMZEG00005022345	crnkl1	100	87.766	ENSPFOG00000005102	crnkl1	100	87.899	Poecilia_formosa
ENSMZEG00005022345	crnkl1	89	94.162	ENSPLAG00000007288	crnkl1	93	89.256	Poecilia_latipinna
ENSMZEG00005022345	crnkl1	89	94.311	ENSPMEG00000008865	crnkl1	97	89.379	Poecilia_mexicana
ENSMZEG00005022345	crnkl1	95	94.504	ENSPREG00000012615	crnkl1	100	86.991	Poecilia_reticulata
ENSMZEG00005022345	crnkl1	89	86.905	ENSPPYG00000010747	CRNKL1	80	87.001	Pongo_abelii
ENSMZEG00005022345	crnkl1	88	82.905	ENSPCAG00000003296	CRNKL1	83	83.033	Procavia_capensis
ENSMZEG00005022345	crnkl1	89	85.863	ENSPCOG00000017608	CRNKL1	82	85.968	Propithecus_coquereli
ENSMZEG00005022345	crnkl1	89	87.500	ENSPVAG00000006207	CRNKL1	82	87.592	Pteropus_vampyrus
ENSMZEG00005022345	crnkl1	100	99.338	ENSPNYG00000001977	crnkl1	100	99.338	Pundamilia_nyererei
ENSMZEG00005022345	crnkl1	89	93.253	ENSPNAG00000001507	crnkl1	99	86.801	Pygocentrus_nattereri
ENSMZEG00005022345	crnkl1	91	86.172	ENSRNOG00000010587	Crnkl1	99	86.172	Rattus_norvegicus
ENSMZEG00005022345	crnkl1	91	86.026	ENSRNOG00000040045	Crnkl1	99	86.026	Rattus_norvegicus
ENSMZEG00005022345	crnkl1	90	87.001	ENSRBIG00000031770	CRNKL1	99	87.001	Rhinopithecus_bieti
ENSMZEG00005022345	crnkl1	90	86.854	ENSRROG00000040450	CRNKL1	99	86.854	Rhinopithecus_roxellana
ENSMZEG00005022345	crnkl1	86	36.614	YLR117C	CLF1	99	36.705	Saccharomyces_cerevisiae
ENSMZEG00005022345	crnkl1	90	87.297	ENSSBOG00000029672	CRNKL1	99	87.297	Saimiri_boliviensis_boliviensis
ENSMZEG00005022345	crnkl1	87	70.167	ENSSHAG00000011199	CRNKL1	99	70.167	Sarcophilus_harrisii
ENSMZEG00005022345	crnkl1	88	91.252	ENSSFOG00015000946	crnkl1	97	84.064	Scleropages_formosus
ENSMZEG00005022345	crnkl1	100	85.548	ENSSMAG00000007933	crnkl1	100	85.640	Scophthalmus_maximus
ENSMZEG00005022345	crnkl1	93	84.823	ENSSDUG00000012625	crnkl1	97	82.119	Seriola_dumerili
ENSMZEG00005022345	crnkl1	97	91.358	ENSSLDG00000021413	crnkl1	100	88.015	Seriola_lalandi_dorsalis
ENSMZEG00005022345	crnkl1	90	86.706	ENSSARG00000006443	CRNKL1	81	86.706	Sorex_araneus
ENSMZEG00005022345	crnkl1	91	87.172	ENSSPUG00000005254	CRNKL1	100	87.172	Sphenodon_punctatus
ENSMZEG00005022345	crnkl1	96	92.083	ENSSPAG00000016150	crnkl1	100	87.758	Stegastes_partitus
ENSMZEG00005022345	crnkl1	91	86.522	ENSSSCG00000038587	CRNKL1	99	86.522	Sus_scrofa
ENSMZEG00005022345	crnkl1	89	87.575	ENSTGUG00000007645	CRNKL1	97	86.451	Taeniopygia_guttata
ENSMZEG00005022345	crnkl1	94	83.404	ENSTRUG00000015417	crnkl1	99	80.713	Takifugu_rubripes
ENSMZEG00005022345	crnkl1	89	91.194	ENSTNIG00000010710	crnkl1	99	89.451	Tetraodon_nigroviridis
ENSMZEG00005022345	crnkl1	83	86.080	ENSTBEG00000001304	CRNKL1	82	86.190	Tupaia_belangeri
ENSMZEG00005022345	crnkl1	83	83.680	ENSTTRG00000000484	CRNKL1	81	83.810	Tursiops_truncatus
ENSMZEG00005022345	crnkl1	90	87.740	ENSUAMG00000018586	CRNKL1	99	87.740	Ursus_americanus
ENSMZEG00005022345	crnkl1	90	87.740	ENSUMAG00000024957	CRNKL1	99	87.740	Ursus_maritimus
ENSMZEG00005022345	crnkl1	89	87.649	ENSVVUG00000012559	CRNKL1	81	87.740	Vulpes_vulpes
ENSMZEG00005022345	crnkl1	89	88.174	ENSXETG00000009698	crnkl1	97	88.174	Xenopus_tropicalis
ENSMZEG00005022345	crnkl1	100	86.189	ENSXCOG00000000824	crnkl1	100	86.334	Xiphophorus_couchianus
ENSMZEG00005022345	crnkl1	100	87.101	ENSXMAG00000006896	crnkl1	100	87.105	Xiphophorus_maculatus