EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022584 (Gene tree)
Gene ID: 101469473
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 27584 bases
Position: chrLG4:21415615-21443198
Accession: 101469473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005030302	zf-C2H2_jaz	PF12171.8	5.9e-06	1	1
ENSMZEP00005030299	zf-C2H2_jaz	PF12171.8	6.2e-06	1	1
ENSMZEP00005030299	G-patch	PF01585.23	9.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005031252	-	4668	XM_004552245	ENSMZEP00005030299	1487 (aa)	XP_004552302	UPI000329AD3F
ENSMZET00005031255	-	4396	XM_012919396	ENSMZEP00005030302	1424 (aa)	XP_012774850	UPI000329A278

Gene Model

Click here to download ENSMZEG00005022584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022584	gpatch8	100	89.023	ENSAPOG00000023938	gpatch8	100	89.224	Acanthochromis_polyacanthus
ENSMZEG00005022584	gpatch8	100	92.503	ENSACIG00000012241	gpatch8	100	92.838	Amphilophus_citrinellus
ENSMZEG00005022584	gpatch8	100	88.822	ENSAOCG00000018102	gpatch8	100	88.822	Amphiprion_ocellaris
ENSMZEG00005022584	gpatch8	100	88.889	ENSAPEG00000016776	gpatch8	100	88.889	Amphiprion_percula
ENSMZEG00005022584	gpatch8	100	84.739	ENSATEG00000003247	gpatch8	100	84.672	Anabas_testudineus
ENSMZEG00005022584	gpatch8	100	99.798	ENSACLG00000004165	gpatch8	100	99.798	Astatotilapia_calliptera
ENSMZEG00005022584	gpatch8	59	60.637	ENSAMXG00000041683	gpatch8	57	62.239	Astyanax_mexicanus
ENSMZEG00005022584	gpatch8	100	80.454	ENSCSEG00000021277	gpatch8	100	80.320	Cynoglossus_semilaevis
ENSMZEG00005022584	gpatch8	100	82.443	ENSCVAG00000013477	gpatch8	100	82.577	Cyprinodon_variegatus
ENSMZEG00005022584	gpatch8	100	64.062	ENSDARG00000059768	gpatch8	56	61.574	Danio_rerio
ENSMZEG00005022584	gpatch8	100	64.827	ENSELUG00000019920	gpatch8	57	64.188	Esox_lucius
ENSMZEG00005022584	gpatch8	56	72.967	ENSFHEG00000005791	gpatch8	100	80.387	Fundulus_heteroclitus
ENSMZEG00005022584	gpatch8	79	55.172	ENSGALG00000041556	GPATCH8	75	53.774	Gallus_gallus
ENSMZEG00005022584	gpatch8	100	82.152	ENSGAFG00000018138	gpatch8	100	81.952	Gambusia_affinis
ENSMZEG00005022584	gpatch8	100	99.128	ENSHBUG00000002669	gpatch8	100	99.128	Haplochromis_burtoni
ENSMZEG00005022584	gpatch8	73	57.647	ENSHGLG00100010738	GPATCH8	61	61.157	Heterocephalus_glaber_male
ENSMZEG00005022584	gpatch8	100	72.903	ENSHCOG00000017518	gpatch8	100	72.836	Hippocampus_comes
ENSMZEG00005022584	gpatch8	59	60.242	ENSIPUG00000015431	gpatch8	55	61.298	Ictalurus_punctatus
ENSMZEG00005022584	gpatch8	100	82.832	ENSKMAG00000018364	gpatch8	100	82.148	Kryptolebias_marmoratus
ENSMZEG00005022584	gpatch8	100	82.522	ENSLBEG00000023352	gpatch8	100	82.789	Labrus_bergylta
ENSMZEG00005022584	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	76	75.887	Lepisosteus_oculatus
ENSMZEG00005022584	gpatch8	99	86.229	ENSMAMG00000001618	gpatch8	100	86.158	Mastacembelus_armatus
ENSMZEG00005022584	gpatch8	61	81.155	ENSMMOG00000020472	gpatch8	100	81.860	Mola_mola
ENSMZEG00005022584	gpatch8	100	84.626	ENSMALG00000004204	gpatch8	100	82.955	Monopterus_albus
ENSMZEG00005022584	gpatch8	100	98.726	ENSNBRG00000016402	gpatch8	100	98.726	Neolamprologus_brichardi
ENSMZEG00005022584	gpatch8	100	94.236	ENSONIG00000001292	gpatch8	100	97.668	Oreochromis_niloticus
ENSMZEG00005022584	gpatch8	56	74.822	ENSORLG00000028497	gpatch8	100	79.867	Oryzias_latipes
ENSMZEG00005022584	gpatch8	96	78.101	ENSORLG00020006656	gpatch8	100	79.854	Oryzias_latipes_hni
ENSMZEG00005022584	gpatch8	56	74.941	ENSORLG00015019797	gpatch8	100	80.253	Oryzias_latipes_hsok
ENSMZEG00005022584	gpatch8	56	74.224	ENSOMEG00000023809	gpatch8	100	80.387	Oryzias_melastigma
ENSMZEG00005022584	gpatch8	56	56.043	ENSPKIG00000004860	GPATCH8	54	55.792	Paramormyrops_kingsleyae
ENSMZEG00005022584	gpatch8	61	52.146	ENSPKIG00000018753	gpatch8	56	54.748	Paramormyrops_kingsleyae
ENSMZEG00005022584	gpatch8	100	77.608	ENSPMGG00000000730	gpatch8	99	77.822	Periophthalmus_magnuspinnatus
ENSMZEG00005022584	gpatch8	100	82.620	ENSPFOG00000014833	gpatch8	100	82.219	Poecilia_formosa
ENSMZEG00005022584	gpatch8	100	82.620	ENSPLAG00000001035	gpatch8	100	82.553	Poecilia_latipinna
ENSMZEG00005022584	gpatch8	100	82.553	ENSPMEG00000024032	gpatch8	100	82.152	Poecilia_mexicana
ENSMZEG00005022584	gpatch8	100	82.286	ENSPREG00000008911	gpatch8	100	82.086	Poecilia_reticulata
ENSMZEG00005022584	gpatch8	100	99.597	ENSPNYG00000009426	gpatch8	100	99.597	Pundamilia_nyererei
ENSMZEG00005022584	gpatch8	59	61.135	ENSPNAG00000016200	gpatch8	58	64.009	Pygocentrus_nattereri
ENSMZEG00005022584	gpatch8	55	55.944	ENSSFOG00015021377	-	55	57.293	Scleropages_formosus
ENSMZEG00005022584	gpatch8	56	55.920	ENSSFOG00015004299	GPATCH8	55	57.876	Scleropages_formosus
ENSMZEG00005022584	gpatch8	100	86.948	ENSSDUG00000018065	gpatch8	100	86.878	Seriola_dumerili
ENSMZEG00005022584	gpatch8	100	87.949	ENSSLDG00000009225	gpatch8	100	87.949	Seriola_lalandi_dorsalis
ENSMZEG00005022584	gpatch8	50	45.308	ENSSPUG00000011251	GPATCH8	55	43.362	Sphenodon_punctatus
ENSMZEG00005022584	gpatch8	100	89.157	ENSSPAG00000011368	gpatch8	100	89.090	Stegastes_partitus
ENSMZEG00005022584	gpatch8	100	78.614	ENSTRUG00000020474	gpatch8	100	78.414	Takifugu_rubripes
ENSMZEG00005022584	gpatch8	60	63.846	ENSTBEG00000009486	GPATCH8	56	64.591	Tupaia_belangeri
ENSMZEG00005022584	gpatch8	56	69.492	ENSXETG00000008843	gpatch8	58	64.777	Xenopus_tropicalis
ENSMZEG00005022584	gpatch8	100	81.733	ENSXCOG00000016680	gpatch8	100	81.400	Xiphophorus_couchianus
ENSMZEG00005022584	gpatch8	100	81.921	ENSXMAG00000009217	gpatch8	100	81.988	Xiphophorus_maculatus