EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022594 (Gene tree)
Gene ID: 101471187
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11079 bases
Position: chrLG4:21468725-21479803
Accession: 101471187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005030316	MMR_HSR1	PF01926.23	4.5e-05	1	1
ENSMZEP00005030318	MMR_HSR1	PF01926.23	8.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005031269	-	2722	XM_004552253	ENSMZEP00005030316	180 (aa)	XP_004552310	UPI00022B1C9D
ENSMZET00005031271	-	684	-	ENSMZEP00005030318	227 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005022594's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022594's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022594	-	100	98.333	ENSACIG00000012192	-	100	98.333	Amphilophus_citrinellus
ENSMZEG00005022594	-	84	95.364	ENSAOCG00000001275	-	88	95.364	Amphiprion_ocellaris
ENSMZEG00005022594	-	100	95.000	ENSAPEG00000016909	-	100	95.000	Amphiprion_percula
ENSMZEG00005022594	-	100	96.667	ENSATEG00000003174	-	100	96.667	Anabas_testudineus
ENSMZEG00005022594	-	100	100.000	ENSACLG00000004123	-	100	100.000	Astatotilapia_calliptera
ENSMZEG00005022594	-	100	92.818	ENSAMXG00000019845	arf1	100	92.818	Astyanax_mexicanus
ENSMZEG00005022594	-	100	96.111	ENSCVAG00000013374	-	100	96.111	Cyprinodon_variegatus
ENSMZEG00005022594	-	100	92.818	ENSDARG00000009484	arf1	100	92.818	Danio_rerio
ENSMZEG00005022594	-	100	93.370	ENSELUG00000022533	arf1	80	92.391	Esox_lucius
ENSMZEG00005022594	-	100	96.111	ENSFHEG00000005859	-	100	96.111	Fundulus_heteroclitus
ENSMZEG00005022594	-	96	91.379	ENSGMOG00000000429	arf1	95	91.379	Gadus_morhua
ENSMZEG00005022594	-	100	96.111	ENSGAFG00000018151	-	100	96.111	Gambusia_affinis
ENSMZEG00005022594	-	100	85.556	ENSGACG00000014195	-	99	84.783	Gasterosteus_aculeatus
ENSMZEG00005022594	-	100	100.000	ENSHBUG00000002636	-	100	100.000	Haplochromis_burtoni
ENSMZEG00005022594	-	100	93.370	ENSIPUG00000006311	arf1	100	93.370	Ictalurus_punctatus
ENSMZEG00005022594	-	100	93.333	ENSKMAG00000018315	-	100	93.333	Kryptolebias_marmoratus
ENSMZEG00005022594	-	99	88.202	ENSLBEG00000023263	-	98	88.202	Labrus_bergylta
ENSMZEG00005022594	-	99	89.944	ENSLBEG00000001998	arf1	99	89.944	Labrus_bergylta
ENSMZEG00005022594	-	100	95.556	ENSMAMG00000001553	-	100	95.556	Mastacembelus_armatus
ENSMZEG00005022594	-	100	96.667	ENSMALG00000004269	-	100	96.667	Monopterus_albus
ENSMZEG00005022594	-	100	100.000	ENSNBRG00000016455	-	100	100.000	Neolamprologus_brichardi
ENSMZEG00005022594	-	100	100.000	ENSONIG00000001286	-	100	100.000	Oreochromis_niloticus
ENSMZEG00005022594	-	100	95.556	ENSORLG00000023270	-	100	95.556	Oryzias_latipes
ENSMZEG00005022594	-	100	95.000	ENSORLG00020006712	-	100	95.000	Oryzias_latipes_hni
ENSMZEG00005022594	-	100	95.556	ENSORLG00015019836	-	100	95.556	Oryzias_latipes_hsok
ENSMZEG00005022594	-	100	95.556	ENSOMEG00000023784	-	100	95.556	Oryzias_melastigma
ENSMZEG00005022594	-	100	90.608	ENSPMGG00000014174	arf1	100	90.608	Periophthalmus_magnuspinnatus
ENSMZEG00005022594	-	100	91.667	ENSPMAG00000002035	arf1	100	91.667	Petromyzon_marinus
ENSMZEG00005022594	-	100	96.111	ENSPFOG00000014787	-	100	96.111	Poecilia_formosa
ENSMZEG00005022594	-	100	96.111	ENSPLAG00000001041	-	100	96.111	Poecilia_latipinna
ENSMZEG00005022594	-	100	96.111	ENSPMEG00000024077	-	100	96.111	Poecilia_mexicana
ENSMZEG00005022594	-	100	96.111	ENSPREG00000009009	-	100	96.111	Poecilia_reticulata
ENSMZEG00005022594	-	100	100.000	ENSPNYG00000009472	-	100	100.000	Pundamilia_nyererei
ENSMZEG00005022594	-	94	94.675	ENSPNAG00000000098	arf1	93	94.675	Pygocentrus_nattereri
ENSMZEG00005022594	-	99	76.536	YDL137W	-	99	76.536	Saccharomyces_cerevisiae
ENSMZEG00005022594	-	99	77.222	YDL192W	-	99	77.222	Saccharomyces_cerevisiae
ENSMZEG00005022594	-	100	89.444	ENSSMAG00000006125	-	100	89.444	Scophthalmus_maximus
ENSMZEG00005022594	-	100	95.000	ENSSDUG00000017356	-	100	95.000	Seriola_dumerili
ENSMZEG00005022594	-	100	95.000	ENSSLDG00000008504	-	100	95.000	Seriola_lalandi_dorsalis
ENSMZEG00005022594	-	100	96.111	ENSSPAG00000011431	-	100	96.111	Stegastes_partitus
ENSMZEG00005022594	-	100	93.889	ENSTRUG00000019870	-	100	93.889	Takifugu_rubripes
ENSMZEG00005022594	-	100	92.222	ENSTNIG00000011685	-	100	92.222	Tetraodon_nigroviridis
ENSMZEG00005022594	-	100	96.111	ENSXCOG00000016687	-	98	96.111	Xiphophorus_couchianus
ENSMZEG00005022594	-	100	96.111	ENSXMAG00000009193	-	100	96.111	Xiphophorus_maculatus