EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022735 (Gene tree)
Gene ID: 101481749
Gene Symbol: rab5c
Alias: wu:fb98b08|wu:fi16g01
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11645 bases
Position: chrLG4:22236807-22248451
Accession: 101481749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005030513	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005031474	-	3543	XM_004552292	ENSMZEP00005030513	220 (aa)	XP_004552349	UPI000329EA26

Gene Model

Click here to download ENSMZEG00005022735's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze04144	Endocytosis	KEGG
mze04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022735	rab5c	98	90.278	ENSG00000108774	RAB5C	100	94.355	Homo_sapiens
ENSMZEG00005022735	rab5c	100	95.455	ENSAPOG00000016864	rab5c	100	95.455	Acanthochromis_polyacanthus
ENSMZEG00005022735	rab5c	98	90.278	ENSAMEG00000006003	RAB5C	99	87.963	Ailuropoda_melanoleuca
ENSMZEG00005022735	rab5c	100	98.182	ENSACIG00000010896	rab5c	100	98.182	Amphilophus_citrinellus
ENSMZEG00005022735	rab5c	100	95.455	ENSAOCG00000016614	rab5c	100	95.455	Amphiprion_ocellaris
ENSMZEG00005022735	rab5c	98	95.349	ENSAPEG00000017868	-	99	95.349	Amphiprion_percula
ENSMZEG00005022735	rab5c	99	96.774	ENSATEG00000001937	rab5c	99	96.774	Anabas_testudineus
ENSMZEG00005022735	rab5c	93	92.195	ENSANAG00000025390	RAB5C	100	89.268	Aotus_nancymaae
ENSMZEG00005022735	rab5c	96	88.208	ENSACLG00000008615	-	100	86.937	Astatotilapia_calliptera
ENSMZEG00005022735	rab5c	100	100.000	ENSACLG00000002706	rab5c	100	100.000	Astatotilapia_calliptera
ENSMZEG00005022735	rab5c	100	95.928	ENSAMXG00000043717	rab5c	100	95.928	Astyanax_mexicanus
ENSMZEG00005022735	rab5c	95	90.865	ENSAMXG00000037267	-	99	90.865	Astyanax_mexicanus
ENSMZEG00005022735	rab5c	98	90.278	ENSBTAG00000006982	RAB5C	99	87.500	Bos_taurus
ENSMZEG00005022735	rab5c	96	75.000	WBGene00004268	rab-5	99	72.851	Caenorhabditis_elegans
ENSMZEG00005022735	rab5c	98	90.278	ENSCAFG00000015629	RAB5C	99	87.963	Canis_familiaris
ENSMZEG00005022735	rab5c	98	90.278	ENSCAFG00020013537	RAB5C	99	87.963	Canis_lupus_dingo
ENSMZEG00005022735	rab5c	98	90.278	ENSCHIG00000012960	RAB5C	99	87.500	Capra_hircus
ENSMZEG00005022735	rab5c	98	90.741	ENSTSYG00000030531	RAB5C	99	87.963	Carlito_syrichta
ENSMZEG00005022735	rab5c	98	90.278	ENSCCAG00000025940	RAB5C	99	87.500	Cebus_capucinus
ENSMZEG00005022735	rab5c	98	90.278	ENSCATG00000040873	RAB5C	99	87.963	Cercocebus_atys
ENSMZEG00005022735	rab5c	98	90.278	ENSCLAG00000016650	RAB5C	99	87.500	Chinchilla_lanigera
ENSMZEG00005022735	rab5c	81	93.820	ENSCHOG00000009886	RAB5C	100	93.820	Choloepus_hoffmanni
ENSMZEG00005022735	rab5c	100	75.000	ENSCING00000003340	-	100	75.000	Ciona_intestinalis
ENSMZEG00005022735	rab5c	99	75.556	ENSCSAVG00000000613	-	99	83.951	Ciona_savignyi
ENSMZEG00005022735	rab5c	98	89.815	ENSCGRG00001014226	Rab5c	99	87.500	Cricetulus_griseus_chok1gshd
ENSMZEG00005022735	rab5c	98	89.815	ENSCGRG00000007534	Rab5c	99	87.500	Cricetulus_griseus_crigri
ENSMZEG00005022735	rab5c	100	94.091	ENSCSEG00000017024	rab5c	100	94.091	Cynoglossus_semilaevis
ENSMZEG00005022735	rab5c	100	94.091	ENSCVAG00000009550	rab5c	100	94.091	Cyprinodon_variegatus
ENSMZEG00005022735	rab5c	98	89.815	ENSDNOG00000038853	RAB5C	99	87.037	Dasypus_novemcinctus
ENSMZEG00005022735	rab5c	98	91.204	ENSDORG00000006819	Rab5c	99	88.426	Dipodomys_ordii
ENSMZEG00005022735	rab5c	90	76.263	FBgn0014010	Rab5	84	80.000	Drosophila_melanogaster
ENSMZEG00005022735	rab5c	89	83.163	ENSEBUG00000014794	rab5c	88	86.559	Eptatretus_burgeri
ENSMZEG00005022735	rab5c	98	90.278	ENSEASG00005009281	RAB5C	99	87.963	Equus_asinus_asinus
ENSMZEG00005022735	rab5c	98	90.741	ENSECAG00000025054	RAB5C	99	87.963	Equus_caballus
ENSMZEG00005022735	rab5c	98	90.278	ENSEEUG00000002790	RAB5C	99	87.500	Erinaceus_europaeus
ENSMZEG00005022735	rab5c	100	90.909	ENSELUG00000010439	-	100	90.909	Esox_lucius
ENSMZEG00005022735	rab5c	98	94.444	ENSELUG00000018516	rab5c	99	94.444	Esox_lucius
ENSMZEG00005022735	rab5c	98	90.278	ENSFCAG00000002148	RAB5C	99	87.500	Felis_catus
ENSMZEG00005022735	rab5c	98	89.352	ENSFDAG00000021541	RAB5C	99	87.037	Fukomys_damarensis
ENSMZEG00005022735	rab5c	100	95.455	ENSFHEG00000012117	rab5c	100	95.455	Fundulus_heteroclitus
ENSMZEG00005022735	rab5c	99	89.041	ENSFHEG00000015268	-	99	89.041	Fundulus_heteroclitus
ENSMZEG00005022735	rab5c	76	87.500	ENSGMOG00000001876	-	97	87.500	Gadus_morhua
ENSMZEG00005022735	rab5c	100	95.000	ENSGMOG00000015096	rab5c	100	95.000	Gadus_morhua
ENSMZEG00005022735	rab5c	100	95.455	ENSGAFG00000000884	rab5c	100	95.455	Gambusia_affinis
ENSMZEG00005022735	rab5c	95	89.474	ENSGAFG00000003642	-	99	87.387	Gambusia_affinis
ENSMZEG00005022735	rab5c	100	90.909	ENSGACG00000008659	rab5c	100	90.909	Gasterosteus_aculeatus
ENSMZEG00005022735	rab5c	98	90.278	ENSGGOG00000005472	RAB5C	99	87.963	Gorilla_gorilla
ENSMZEG00005022735	rab5c	100	100.000	ENSHBUG00000002014	rab5c	100	100.000	Haplochromis_burtoni
ENSMZEG00005022735	rab5c	96	88.208	ENSHBUG00000006823	-	100	86.937	Haplochromis_burtoni
ENSMZEG00005022735	rab5c	98	88.889	ENSHGLG00000012067	RAB5C	99	86.574	Heterocephalus_glaber_female
ENSMZEG00005022735	rab5c	100	95.475	ENSHCOG00000004662	rab5c	99	95.475	Hippocampus_comes
ENSMZEG00005022735	rab5c	95	80.000	ENSHCOG00000020238	-	99	78.539	Hippocampus_comes
ENSMZEG00005022735	rab5c	95	93.780	ENSIPUG00000020082	rab5c	100	93.243	Ictalurus_punctatus
ENSMZEG00005022735	rab5c	98	89.815	ENSSTOG00000006620	RAB5C	99	87.500	Ictidomys_tridecemlineatus
ENSMZEG00005022735	rab5c	98	90.278	ENSJJAG00000021181	Rab5c	99	87.500	Jaculus_jaculus
ENSMZEG00005022735	rab5c	99	89.041	ENSKMAG00000017417	-	99	89.041	Kryptolebias_marmoratus
ENSMZEG00005022735	rab5c	100	95.909	ENSKMAG00000020038	rab5c	100	95.909	Kryptolebias_marmoratus
ENSMZEG00005022735	rab5c	100	88.688	ENSLBEG00000010408	-	100	88.688	Labrus_bergylta
ENSMZEG00005022735	rab5c	100	96.364	ENSLBEG00000004128	rab5c	100	96.364	Labrus_bergylta
ENSMZEG00005022735	rab5c	98	92.130	ENSLOCG00000012566	rab5c	100	90.278	Lepisosteus_oculatus
ENSMZEG00005022735	rab5c	98	90.278	ENSMFAG00000039627	RAB5C	99	87.963	Macaca_fascicularis
ENSMZEG00005022735	rab5c	98	90.278	ENSMNEG00000000355	RAB5C	99	87.963	Macaca_nemestrina
ENSMZEG00005022735	rab5c	100	95.909	ENSMAMG00000022322	rab5c	100	95.909	Mastacembelus_armatus
ENSMZEG00005022735	rab5c	99	90.455	ENSMAMG00000016207	-	100	90.455	Mastacembelus_armatus
ENSMZEG00005022735	rab5c	96	88.208	ENSMZEG00005021090	-	100	86.937	Maylandia_zebra
ENSMZEG00005022735	rab5c	98	90.741	ENSMAUG00000015005	Rab5c	99	87.963	Mesocricetus_auratus
ENSMZEG00005022735	rab5c	98	90.741	ENSMICG00000041608	RAB5C	99	87.963	Microcebus_murinus
ENSMZEG00005022735	rab5c	98	90.278	ENSMOCG00000018531	-	99	87.500	Microtus_ochrogaster
ENSMZEG00005022735	rab5c	100	95.000	ENSMMOG00000020621	rab5c	100	95.000	Mola_mola
ENSMZEG00005022735	rab5c	98	88.837	ENSMALG00000006052	rab5c	97	89.041	Monopterus_albus
ENSMZEG00005022735	rab5c	99	87.727	ENSMALG00000022348	-	100	87.727	Monopterus_albus
ENSMZEG00005022735	rab5c	98	90.741	MGP_CAROLIEiJ_G0017184	Rab5c	99	87.963	Mus_caroli
ENSMZEG00005022735	rab5c	98	90.741	ENSMUSG00000019173	Rab5c	99	87.963	Mus_musculus
ENSMZEG00005022735	rab5c	98	90.741	MGP_PahariEiJ_G0018314	Rab5c	99	87.963	Mus_pahari
ENSMZEG00005022735	rab5c	98	90.741	MGP_SPRETEiJ_G0018027	Rab5c	99	87.963	Mus_spretus
ENSMZEG00005022735	rab5c	98	90.278	ENSMPUG00000010554	RAB5C	99	87.963	Mustela_putorius_furo
ENSMZEG00005022735	rab5c	98	90.278	ENSNGAG00000010286	Rab5c	99	87.500	Nannospalax_galili
ENSMZEG00005022735	rab5c	100	99.091	ENSNBRG00000018165	rab5c	100	99.091	Neolamprologus_brichardi
ENSMZEG00005022735	rab5c	96	88.208	ENSNBRG00000016922	-	100	86.937	Neolamprologus_brichardi
ENSMZEG00005022735	rab5c	81	87.079	ENSOPRG00000008255	RAB5C	100	87.079	Ochotona_princeps
ENSMZEG00005022735	rab5c	98	89.815	ENSODEG00000017920	RAB5C	99	87.037	Octodon_degus
ENSMZEG00005022735	rab5c	100	98.182	ENSONIG00000001113	rab5c	100	98.182	Oreochromis_niloticus
ENSMZEG00005022735	rab5c	99	95.392	ENSORLG00000003882	rab5c	99	95.392	Oryzias_latipes
ENSMZEG00005022735	rab5c	99	94.931	ENSORLG00020008388	rab5c	99	94.931	Oryzias_latipes_hni
ENSMZEG00005022735	rab5c	99	95.392	ENSORLG00015021900	rab5c	99	95.392	Oryzias_latipes_hsok
ENSMZEG00005022735	rab5c	99	95.392	ENSOMEG00000023078	rab5c	99	95.392	Oryzias_melastigma
ENSMZEG00005022735	rab5c	98	90.741	ENSOGAG00000009456	RAB5C	99	87.963	Otolemur_garnettii
ENSMZEG00005022735	rab5c	98	90.278	ENSOARG00000018768	RAB5C	99	87.500	Ovis_aries
ENSMZEG00005022735	rab5c	98	90.278	ENSPPAG00000037206	RAB5C	99	87.963	Pan_paniscus
ENSMZEG00005022735	rab5c	98	90.278	ENSPPRG00000005745	RAB5C	99	87.500	Panthera_pardus
ENSMZEG00005022735	rab5c	98	90.278	ENSPTIG00000008177	RAB5C	99	87.500	Panthera_tigris_altaica
ENSMZEG00005022735	rab5c	98	90.278	ENSPTRG00000009194	RAB5C	99	87.963	Pan_troglodytes
ENSMZEG00005022735	rab5c	98	87.037	ENSPKIG00000001237	-	99	85.648	Paramormyrops_kingsleyae
ENSMZEG00005022735	rab5c	98	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSMZEG00005022735	rab5c	100	91.364	ENSPMGG00000010792	rab5c	99	93.023	Periophthalmus_magnuspinnatus
ENSMZEG00005022735	rab5c	98	90.278	ENSPEMG00000017971	Rab5c	99	87.500	Peromyscus_maniculatus_bairdii
ENSMZEG00005022735	rab5c	98	79.186	ENSPMAG00000000008	rab5c	88	86.979	Petromyzon_marinus
ENSMZEG00005022735	rab5c	99	76.037	ENSPMAG00000001399	rab5c	99	76.389	Petromyzon_marinus
ENSMZEG00005022735	rab5c	87	81.250	ENSPMAG00000007867	rab5c	88	83.333	Petromyzon_marinus
ENSMZEG00005022735	rab5c	98	90.278	ENSPCIG00000020225	-	99	87.963	Phascolarctos_cinereus
ENSMZEG00005022735	rab5c	99	88.584	ENSPLAG00000016333	-	100	88.584	Poecilia_latipinna
ENSMZEG00005022735	rab5c	100	95.455	ENSPLAG00000004790	rab5c	100	95.455	Poecilia_latipinna
ENSMZEG00005022735	rab5c	96	89.671	ENSPMEG00000012614	-	100	87.892	Poecilia_mexicana
ENSMZEG00005022735	rab5c	100	95.455	ENSPMEG00000011336	rab5c	100	95.455	Poecilia_mexicana
ENSMZEG00005022735	rab5c	100	95.455	ENSPREG00000010146	rab5c	100	95.455	Poecilia_reticulata
ENSMZEG00005022735	rab5c	84	91.398	ENSPREG00000022167	-	89	91.803	Poecilia_reticulata
ENSMZEG00005022735	rab5c	98	90.278	ENSPPYG00000008398	RAB5C	99	87.963	Pongo_abelii
ENSMZEG00005022735	rab5c	98	89.352	ENSPCAG00000016412	RAB5C	99	86.574	Procavia_capensis
ENSMZEG00005022735	rab5c	98	89.815	ENSPCOG00000026327	RAB5C	99	87.500	Propithecus_coquereli
ENSMZEG00005022735	rab5c	98	90.741	ENSPVAG00000003867	RAB5C	99	87.963	Pteropus_vampyrus
ENSMZEG00005022735	rab5c	96	88.208	ENSPNYG00000015851	-	100	86.937	Pundamilia_nyererei
ENSMZEG00005022735	rab5c	100	100.000	ENSPNYG00000010615	rab5c	100	100.000	Pundamilia_nyererei
ENSMZEG00005022735	rab5c	100	95.475	ENSPNAG00000028138	rab5c	100	95.475	Pygocentrus_nattereri
ENSMZEG00005022735	rab5c	95	88.517	ENSPNAG00000002218	-	98	88.517	Pygocentrus_nattereri
ENSMZEG00005022735	rab5c	98	90.741	ENSRNOG00000018568	Rab5c	99	87.963	Rattus_norvegicus
ENSMZEG00005022735	rab5c	98	90.278	ENSRBIG00000031376	RAB5C	99	87.963	Rhinopithecus_bieti
ENSMZEG00005022735	rab5c	98	90.278	ENSRROG00000032895	RAB5C	99	87.963	Rhinopithecus_roxellana
ENSMZEG00005022735	rab5c	98	90.278	ENSSBOG00000032552	-	99	87.500	Saimiri_boliviensis_boliviensis
ENSMZEG00005022735	rab5c	98	90.741	ENSSHAG00000005267	-	99	88.426	Sarcophilus_harrisii
ENSMZEG00005022735	rab5c	100	85.455	ENSSFOG00015009988	-	100	85.455	Scleropages_formosus
ENSMZEG00005022735	rab5c	95	95.694	ENSSMAG00000007323	rab5c	100	94.545	Scophthalmus_maximus
ENSMZEG00005022735	rab5c	100	95.455	ENSSDUG00000023008	rab5c	100	95.455	Seriola_dumerili
ENSMZEG00005022735	rab5c	100	94.545	ENSSLDG00000017771	rab5c	100	94.545	Seriola_lalandi_dorsalis
ENSMZEG00005022735	rab5c	98	90.278	ENSSPUG00000012950	-	99	87.963	Sphenodon_punctatus
ENSMZEG00005022735	rab5c	100	97.727	ENSSPAG00000006436	rab5c	100	97.727	Stegastes_partitus
ENSMZEG00005022735	rab5c	98	90.278	ENSSSCG00000032467	RAB5C	99	87.500	Sus_scrofa
ENSMZEG00005022735	rab5c	100	94.091	ENSTRUG00000015590	rab5c	100	94.091	Takifugu_rubripes
ENSMZEG00005022735	rab5c	96	96.209	ENSTNIG00000011711	rab5c	95	96.209	Tetraodon_nigroviridis
ENSMZEG00005022735	rab5c	98	90.278	ENSTBEG00000007092	RAB5C	99	87.963	Tupaia_belangeri
ENSMZEG00005022735	rab5c	98	89.352	ENSTTRG00000006673	RAB5C	99	87.037	Tursiops_truncatus
ENSMZEG00005022735	rab5c	98	90.278	ENSUAMG00000024343	RAB5C	99	87.963	Ursus_americanus
ENSMZEG00005022735	rab5c	98	90.278	ENSUMAG00000023270	RAB5C	99	87.963	Ursus_maritimus
ENSMZEG00005022735	rab5c	95	89.952	ENSXCOG00000006300	-	99	87.838	Xiphophorus_couchianus
ENSMZEG00005022735	rab5c	100	95.455	ENSXCOG00000016788	rab5c	100	95.455	Xiphophorus_couchianus
ENSMZEG00005022735	rab5c	99	88.128	ENSXMAG00000022179	-	100	88.128	Xiphophorus_maculatus
ENSMZEG00005022735	rab5c	100	95.455	ENSXMAG00000003266	rab5c	100	95.455	Xiphophorus_maculatus